RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 MAP3K2Q9Y2U5 619 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 RAD50Q92878 1312 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 COL15A1P39059 1388 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 C1orf167Q5SNV9 1468 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 CPDO75976 1380 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 ZNF536O15090 1300 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 ERVV-2B6SEH9 535 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 CYP1A1P04798 512 aaPredicted RBP5.35□□□□□ -1.55
PTPRM-215ENST00000583289 NBPF7P0C2Y1 421 aaPredicted RBP5.35□□□□□ -1.55
PTPRM-215ENST00000583289 PHKG2P15735 406 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 CCDC173Q0VFZ6 552 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 KRT32Q14532 448 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 PUM1Q14671 1186 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTPRM-215ENST00000583289 VPS53Q5VIR6 699 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 CPZQ66K79 652 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 GLB1LQ6UWU2 654 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 RSPO2Q6UXX9 243 aaPredicted RBP5.35□□□□□ -1.55
PTPRM-215ENST00000583289 MCF2L2Q86YR7 1114 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 TRIM48Q8IWZ4 208 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 SGSM3Q96HU1 749 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 LOXL4Q96JB6 756 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 TMX3Q96JJ7 454 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 C1QTNF3Q9BXJ4 246 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 TMEM168Q9H0V1 697 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 HMG20BQ9P0W2 317 aa5.35□□□□□ -1.55
PTPRM-215ENST00000583289 CAMTA1Q9Y6Y1 1673 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 ADCY9O60503 1353 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 A0A1W2PQU0 124 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 IQCA1LA6NCM1 817 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 GRIA2P42262 883 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 GCKRQ14397 625 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 HSP90AA2PQ14568 343 aaPredicted RBP5.34□□□□□ -1.55
PTPRM-215ENST00000583289 DDR2Q16832 855 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 FAM184AQ8NB25 1140 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 TTLL11Q8NHH1 800 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 PLBD2Q8NHP8 589 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 LRRC59Q96AG4 307 aaKnown RBP5.34□□□□□ -1.55
PTPRM-215ENST00000583289 ZSWIM3Q96MP5 696 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 IER2Q9BTL4 223 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 GPR108Q9NPR9 543 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 ASH2LQ9UBL3 628 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 FTSJ1Q9UET6 329 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 NUB1Q9Y5A7 615 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 CYP46A1Q9Y6A2 500 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 AK9Q5TCS8 1911 aa5.34□□□□□ -1.55
PTPRM-215ENST00000583289 ADAMTS7Q9UKP4 1686 aa5.34□□□□□ -1.56
PTPRM-215ENST00000583289 RFX7Q2KHR2 1363 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 C1QTNF3-AMACRE9PGA6 284 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 LAMTOR5O43504 91 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 LRG1P02750 347 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 HMGB1P09429 215 aaKnown RBP5.33□□□□□ -1.56
PTPRM-215ENST00000583289 ATP5JP18859 108 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 DNAJA1P31689 397 aaKnown RBP5.33□□□□□ -1.56
PTPRM-215ENST00000583289 MCM5P33992 734 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 KCNJ4P48050 445 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 ZC3H6P61129 1189 aaKnown RBP5.33□□□□□ -1.56
PTPRM-215ENST00000583289 AACSQ86V21 672 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 CHST13Q8NET6 341 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 HNRNPLLQ8WVV9 542 aaKnown RBP5.33□□□□□ -1.56
PTPRM-215ENST00000583289 C8orf49Q96NF6 230 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 ZFYVE21Q9BQ24 234 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 CDIP1Q9H305 208 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 IL1RAPL2Q9NP60 686 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 SLC6A20Q9NP91 592 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 LMBRD1Q9NUN5 540 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 SMC3Q9UQE7 1217 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 KIF3AQ9Y496 699 aa5.33□□□□□ -1.56
PTPRM-215ENST00000583289 TRPM3Q9HCF6 1732 aaPredicted RBP5.33□□□□□ -1.56
PTPRM-215ENST00000583289 SIPA1L3O60292 1781 aaPredicted RBP5.32□□□□□ -1.56
PTPRM-215ENST00000583289 SCN11AQ9UI33 1791 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 SPATA31A3Q5VYP0 1347 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 PCDH11XQ9BZA7 1347 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 PCDH11YQ9BZA8 1340 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 KCNQ3O43525 872 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 DLX3O60479 287 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 B4GALT3O60512 393 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 ZNF20P17024 532 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 RABL6Q3YEC7 729 aaPredicted RBP5.32□□□□□ -1.56
PTPRM-215ENST00000583289 PKN3Q6P5Z2 889 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 CWC27Q6UX04 472 aaKnown RBP5.32□□□□□ -1.56
PTPRM-215ENST00000583289 USP53Q70EK8 1073 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 RUFY3Q7L099 469 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 COPS6Q7L5N1 327 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 KLHL36Q8N4N3 616 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 SLC43A3Q8NBI5 491 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 CCDC191Q8NCU4 936 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 ZCRB1Q8TBF4 217 aaKnown RBP5.32□□□□□ -1.56
PTPRM-215ENST00000583289 DCAF4Q8WV16 495 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 MAP4K1Q92918 833 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 PPP1R9BQ96SB3 815 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 AARSD1Q9BTE6 412 aaKnown RBP5.32□□□□□ -1.56
PTPRM-215ENST00000583289 PHF20Q9BVI0 1012 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 KRTAP3-1Q9BYR8 98 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 LSG1Q9H089 658 aaKnown RBP5.32□□□□□ -1.56
PTPRM-215ENST00000583289 TMPRSS5Q9H3S3 457 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 BARX1Q9HBU1 254 aaPredicted RBP5.32□□□□□ -1.56
PTPRM-215ENST00000583289 PDRG1Q9NUG6 133 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 CROTQ9UKG9 612 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 SNX14Q9Y5W7 946 aa5.32□□□□□ -1.56
PTPRM-215ENST00000583289 TUBGCP6Q96RT7 1819 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms