RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 ZNF598Q86UK7 904 aaKnown RBP8.64□□□□□ -1.03
CCDC47-205ENST00000582331 TMEM173Q86WV6 379 aaPredicted RBP8.64□□□□□ -1.03
CCDC47-205ENST00000582331 CCDC60Q8IWA6 550 aaPredicted RBP8.64□□□□□ -1.03
CCDC47-205ENST00000582331 PLEKHM2Q8IWE5 1019 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 ZNF654Q8IZM8 581 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 CMTR1Q8N1G2 835 aaKnown RBP8.64□□□□□ -1.03
CCDC47-205ENST00000582331 SLC44A3Q8N4M1 653 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 SUMF1Q8NBK3 374 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 RSAD2Q8WXG1 361 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 NXPE3Q969Y0 559 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 BORCS6Q96GS4 357 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 IGSF21Q96ID5 467 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 KLHL5Q96PQ7 755 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 MAP7D2Q96T17 732 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 MYL10Q9BUA6 226 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 EMILIN2Q9BXX0 1053 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 ADAMTS10Q9H324 1103 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 OSBPL3Q9H4L5 887 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 DACT1Q9NYF0 836 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 CEP131Q9UPN4 1083 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 AKT3Q9Y243 479 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 EP300Q09472 2414 aaPredicted RBP8.64□□□□□ -1.03
CCDC47-205ENST00000582331 KMT2BQ9UMN6 2715 aaPredicted RBP8.64□□□□□ -1.03
CCDC47-205ENST00000582331 DENND4AQ7Z401 1863 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 EVPLQ92817 2033 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 CACNA1BQ00975 2339 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 hCG_1642624A0A1W2PR95 340 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 E7EWF7 191 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 MEIS1O00470 390 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 GALTP07902 379 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 TMOD1P28289 359 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 ZNF76P36508 570 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 CLCN3P51790 818 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 CLCN4P51793 760 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 ATXN1P54253 815 aaKnown RBP8.63□□□□□ -1.03
CCDC47-205ENST00000582331 PTPN14Q15678 1187 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 TSR1Q2NL82 804 aaKnown RBP8.63□□□□□ -1.03
CCDC47-205ENST00000582331 EFCAB12Q6NXP0 572 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 CYP26C1Q6V0L0 522 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 TRMT1LQ7Z2T5 733 aaKnown RBP8.63□□□□□ -1.03
CCDC47-205ENST00000582331 PACS2Q86VP3 889 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 GPR161Q8N6U8 529 aaKnown RBP8.63□□□□□ -1.03
CCDC47-205ENST00000582331 CMASQ8NFW8 434 aaPredicted RBP8.63□□□□□ -1.03
CCDC47-205ENST00000582331 GPR152Q8TDT2 470 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 RSPH1Q8WYR4 309 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 STAMQ92783 540 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 NRDE2Q9H7Z3 1164 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 DLGAP2Q9P1A6 1054 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 NCDNQ9UBB6 729 aa8.63□□□□□ -1.03
CCDC47-205ENST00000582331 CCDC195A0A1B0GUA6 201 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 N4BP1O75113 896 aaKnown RBP8.62□□□□□ -1.03
CCDC47-205ENST00000582331 FOSP01100 380 aaPredicted RBP8.62□□□□□ -1.03
CCDC47-205ENST00000582331 CNPP09543 421 aaKnown RBP8.62□□□□□ -1.03
CCDC47-205ENST00000582331 DARSP14868 501 aaKnown RBP8.62□□□□□ -1.03
CCDC47-205ENST00000582331 FGFR4P22455 802 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 ANTXR2P58335 489 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 RNASELQ05823 741 aaKnown RBP8.62□□□□□ -1.03
CCDC47-205ENST00000582331 ST3GAL2Q16842 350 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 NOMO2Q5JPE7 1267 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 ELMSAN1Q6PJG2 1045 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 DCLRE1AQ6PJP8 1040 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 GLB1LQ6UWU2 654 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 NFXL1Q6ZNB6 911 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 NIPA1Q7RTP0 329 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 HEATR3Q7Z4Q2 680 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 CHD1LQ86WJ1 897 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 TMTC2Q8N394 836 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 LRRC71Q8N4P6 559 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 CCDC82Q8N4S0 544 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 BCL7CQ8WUZ0 217 aaPredicted RBP8.62□□□□□ -1.03
CCDC47-205ENST00000582331 SECISBP2LQ93073 1101 aaKnown RBP8.62□□□□□ -1.03
CCDC47-205ENST00000582331 PGBD1Q96JS3 809 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 ZNF668Q96K58 619 aaPredicted RBP8.62□□□□□ -1.03
CCDC47-205ENST00000582331 ZFRQ96KR1 1074 aaKnown RBP8.62□□□□□ -1.03
CCDC47-205ENST00000582331 SCLT1Q96NL6 688 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 MYADMQ96S97 322 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 IL25Q9H293 177 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 LY9Q9HBG7 655 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 WDR6Q9NNW5 1121 aaKnown RBP8.62□□□□□ -1.03
CCDC47-205ENST00000582331 ARHGEF3Q9NR81 526 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 CHST12Q9NRB3 414 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 EPS15L1Q9UBC2 864 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 STK39Q9UEW8 545 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 MAFBQ9Y5Q3 323 aaPredicted RBP8.62□□□□□ -1.03
CCDC47-205ENST00000582331 TAF6LQ9Y6J9 622 aa8.62□□□□□ -1.03
CCDC47-205ENST00000582331 CCDC69A6NI79 296 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 PRR5-ARHGAP8B1AHC4 643 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 DHX15O43143 795 aaKnown RBP8.61□□□□□ -1.03
CCDC47-205ENST00000582331 LILRB3O75022 631 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 ALDH2P05091 517 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 SSBP05455 408 aaKnown RBP eCLIP8.61□□□□□ -1.03
CCDC47-205ENST00000582331 PSAPP07602 524 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 CALM1P0DP23 149 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 CALM2P0DP24 149 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 CALM3P0DP25 149 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 SKIP12755 728 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 RXRAP19793 462 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 PHKA2P46019 1235 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 SLC11A1P49279 550 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 GPC3P51654 580 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms