RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 FGFBP2Q9BYJ0 223 aa13.85□□□□□ -0.19
SRSF1-204ENST00000581979 THAP9Q9H5L6 903 aa13.85□□□□□ -0.19
SRSF1-204ENST00000581979 MAGEC2Q9UBF1 373 aaPredicted RBP13.85□□□□□ -0.19
SRSF1-204ENST00000581979 SEPT9Q9UHD8 586 aaPredicted RBP13.85□□□□□ -0.19
SRSF1-204ENST00000581979 GTF2IRD1Q9UHL9 959 aa13.85□□□□□ -0.19
SRSF1-204ENST00000581979 TANC1Q9C0D5 1861 aa13.85□□□□□ -0.19
SRSF1-204ENST00000581979 CHD9Q3L8U1 2897 aa13.85□□□□□ -0.19
SRSF1-204ENST00000581979 GSTTP1A0A1W2PQM5 241 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 KCNJ18B7U540 433 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 NOP56O00567 594 aaKnown RBP13.84□□□□□ -0.19
SRSF1-204ENST00000581979 ZNF862O60290 1169 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 GCNT3O95395 438 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 PSEN2P49810 448 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 LRRC63Q05C16 580 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 RBL2Q08999 1139 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 KCNJ12Q14500 433 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 GRIN2CQ14957 1233 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 RAB30Q15771 203 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 FAM160B1Q5W0V3 765 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 ANO5Q75V66 913 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 NELFCDQ8IXH7 590 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 CAGE1Q8TC20 777 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 CEP170P1Q96L14 293 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 SPATA33Q96N06 139 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 NAP1L5Q96NT1 182 aaPredicted RBP13.84□□□□□ -0.19
SRSF1-204ENST00000581979 DUSP9Q99956 384 aaKnown RBP13.84□□□□□ -0.19
SRSF1-204ENST00000581979 TIPINQ9BVW5 301 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 SEL1LQ9UBV2 794 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 NOD1Q9Y239 953 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 SCN5AQ14524 2016 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 FGFR1OPO95684 399 aaKnown RBP13.84□□□□□ -0.19
SRSF1-204ENST00000581979 ZNF286BP0CG31 522 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 MYBP10242 640 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 TCF7P36402 384 aaPredicted RBP13.84□□□□□ -0.19
SRSF1-204ENST00000581979 ZNF131P52739 623 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 NPEPPSP55786 919 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 CHMP4BP1P59074 171 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 MFSD10Q14728 455 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 KIAA0753Q2KHM9 967 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 FILIP1LQ4L180 1135 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 HS1BP3Q53T59 392 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 XKR3Q5GH77 459 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 TCP11X2Q5H9J9 407 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 FAM114A1Q8IWE2 563 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 CCDC155Q8N6L0 562 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 C7orf31Q8N865 590 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 SCFD1Q8WVM8 642 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 OLFML3Q9NRN5 406 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 HDAC6Q9UBN7 1215 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 LIMA1Q9UHB6 759 aaKnown RBP13.84□□□□□ -0.19
SRSF1-204ENST00000581979 MAFBQ9Y5Q3 323 aaPredicted RBP13.84□□□□□ -0.19
SRSF1-204ENST00000581979 SLC4A7Q9Y6M7 1214 aa13.84□□□□□ -0.19
SRSF1-204ENST00000581979 PRUNE2Q8WUY3 3088 aa13.83□□□□□ -0.19
SRSF1-204ENST00000581979 IGKV6D-21A0A0A0MT36 114 aa13.83□□□□□ -0.2
SRSF1-204ENST00000581979 STBD1O95210 358 aa13.83□□□□□ -0.2
SRSF1-204ENST00000581979 OATP04181 439 aa13.83□□□□□ -0.2
SRSF1-204ENST00000581979 FOSL2P15408 326 aa13.83□□□□□ -0.2
SRSF1-204ENST00000581979 CASP5P51878 434 aa13.83□□□□□ -0.2
SRSF1-204ENST00000581979 ODR4Q5SWX8 454 aa13.83□□□□□ -0.2
SRSF1-204ENST00000581979 STXBP4Q6ZWJ1 553 aa13.83□□□□□ -0.2
SRSF1-204ENST00000581979 TMC6Q7Z403 805 aa13.83□□□□□ -0.2
SRSF1-204ENST00000581979 DEFB128Q7Z7B8 93 aa13.83□□□□□ -0.2
SRSF1-204ENST00000581979 FAM178BQ8IXR5 827 aa13.83□□□□□ -0.2
SRSF1-204ENST00000581979 MAFAQ8NHW3 353 aaPredicted RBP13.83□□□□□ -0.2
SRSF1-204ENST00000581979 AFAP1L1Q8TED9 768 aa13.83□□□□□ -0.2
SRSF1-204ENST00000581979 DHX38Q92620 1227 aaKnown RBP13.83□□□□□ -0.2
SRSF1-204ENST00000581979 DRC1Q96MC2 740 aa13.83□□□□□ -0.2
SRSF1-204ENST00000581979 C16orf70Q9BSU1 422 aa13.83□□□□□ -0.2
SRSF1-204ENST00000581979 AZI2Q9H6S1 392 aa13.83□□□□□ -0.2
SRSF1-204ENST00000581979 MSRAQ9UJ68 235 aa13.83□□□□□ -0.2
SRSF1-204ENST00000581979 TRIP12Q14669 1992 aaPredicted RBP13.83□□□□□ -0.2
SRSF1-204ENST00000581979 PRPF6O94906 941 aaKnown RBP13.82□□□□□ -0.2
SRSF1-204ENST00000581979 ACTN1P12814 892 aa13.82□□□□□ -0.2
SRSF1-204ENST00000581979 EEF1GP26641 437 aaKnown RBP13.82□□□□□ -0.2
SRSF1-204ENST00000581979 NMT1P30419 496 aaKnown RBP13.82□□□□□ -0.2
SRSF1-204ENST00000581979 STAT5BP51692 787 aa13.82□□□□□ -0.2
SRSF1-204ENST00000581979 MAPK7Q13164 816 aa13.82□□□□□ -0.2
SRSF1-204ENST00000581979 KRT31Q15323 416 aa13.82□□□□□ -0.2
SRSF1-204ENST00000581979 MTERF2Q49AM1 385 aa13.82□□□□□ -0.2
SRSF1-204ENST00000581979 FAM102BQ5T8I3 360 aa13.82□□□□□ -0.2
SRSF1-204ENST00000581979 EPM2AIP1Q7L775 607 aaPredicted RBP13.82□□□□□ -0.2
SRSF1-204ENST00000581979 GBF1Q92538 1859 aa13.82□□□□□ -0.2
SRSF1-204ENST00000581979 GPR20Q99678 358 aa13.82□□□□□ -0.2
SRSF1-204ENST00000581979 CYP26B1Q9NR63 512 aa13.82□□□□□ -0.2
SRSF1-204ENST00000581979 LARSQ9P2J5 1176 aaKnown RBP13.82□□□□□ -0.2
SRSF1-204ENST00000581979 A0A1B0GTH6 734 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 EIF3DO15371 548 aaKnown RBP eCLIP13.81□□□□□ -0.2
SRSF1-204ENST00000581979 DGAT1O75907 488 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 PARNO95453 639 aaKnown RBP13.81□□□□□ -0.2
SRSF1-204ENST00000581979 ATP4AP20648 1035 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 COPB1P53618 953 aaKnown RBP13.81□□□□□ -0.2
SRSF1-204ENST00000581979 PTK7Q13308 1070 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 GPNMBQ14956 572 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 KNOP1Q1ED39 458 aaKnown RBP13.81□□□□□ -0.2
SRSF1-204ENST00000581979 FOXR2Q6PJQ5 311 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 CCDC186Q7Z3E2 898 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 FILIP1Q7Z7B0 1213 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.81□□□□□ -0.2
SRSF1-204ENST00000581979 DAW1Q8N136 415 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 TET1Q8NFU7 2136 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms