RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 SRGAP1Q7Z6B7 1085 aa23.75■■□□□ 1.39
CSNK1D-216ENST00000581108 FERMT3Q86UX7 667 aa23.75■■□□□ 1.39
CSNK1D-216ENST00000581108 ZSCAN31Q96LW9 406 aaPredicted RBP23.75■■□□□ 1.39
CSNK1D-216ENST00000581108 MTRQ99707 1265 aa23.75■■□□□ 1.39
CSNK1D-216ENST00000581108 XPNPEP1Q9NQW7 623 aa23.75■■□□□ 1.39
CSNK1D-216ENST00000581108 FAM105AQ9NUU6 356 aa23.75■■□□□ 1.39
CSNK1D-216ENST00000581108 PUF60Q9UHX1 559 aaKnown RBP23.75■■□□□ 1.39
CSNK1D-216ENST00000581108 CD207Q9UJ71 328 aa23.75■■□□□ 1.39
CSNK1D-216ENST00000581108 LZTS1Q9Y250 596 aa23.75■■□□□ 1.39
CSNK1D-216ENST00000581108 MEIS3P2A8K0S8 358 aa23.74■■□□□ 1.39
CSNK1D-216ENST00000581108 ASAP2O43150 1006 aa23.74■■□□□ 1.39
CSNK1D-216ENST00000581108 GAS2O43903 313 aaKnown RBP23.74■■□□□ 1.39
CSNK1D-216ENST00000581108 GLP2RO95838 553 aa23.74■■□□□ 1.39
CSNK1D-216ENST00000581108 SKIP12755 728 aa23.74■■□□□ 1.39
CSNK1D-216ENST00000581108 COL9A1P20849 921 aa23.74■■□□□ 1.39
CSNK1D-216ENST00000581108 SMAD2Q15796 467 aaKnown RBP23.74■■□□□ 1.39
CSNK1D-216ENST00000581108 RNF149Q8NC42 400 aa23.74■■□□□ 1.39
CSNK1D-216ENST00000581108 MSLNLQ96KJ4 702 aa23.74■■□□□ 1.39
CSNK1D-216ENST00000581108 AGPAT5Q9NUQ2 364 aa23.74■■□□□ 1.39
CSNK1D-216ENST00000581108 SPG21Q9NZD8 308 aa23.74■■□□□ 1.39
CSNK1D-216ENST00000581108 POTEMA6NI47 508 aa23.73■■□□□ 1.39
CSNK1D-216ENST00000581108 ZNF623O75123 536 aa23.73■■□□□ 1.39
CSNK1D-216ENST00000581108 PPM1AP35813 382 aa23.73■■□□□ 1.39
CSNK1D-216ENST00000581108 RBM10P98175 930 aaKnown RBP23.73■■□□□ 1.39
CSNK1D-216ENST00000581108 KRT17Q04695 432 aa23.73■■□□□ 1.39
CSNK1D-216ENST00000581108 ZP2Q05996 745 aa23.73■■□□□ 1.39
CSNK1D-216ENST00000581108 SMAD4Q13485 552 aaKnown RBP23.73■■□□□ 1.39
CSNK1D-216ENST00000581108 PLPP4Q5VZY2 271 aa23.73■■□□□ 1.39
CSNK1D-216ENST00000581108 PDE12Q6L8Q7 609 aaKnown RBP23.73■■□□□ 1.39
CSNK1D-216ENST00000581108 PIGOQ8TEQ8 1089 aa23.73■■□□□ 1.39
CSNK1D-216ENST00000581108 TCF25Q9BQ70 676 aa23.73■■□□□ 1.39
CSNK1D-216ENST00000581108 MRPL9Q9BYD2 267 aaKnown RBP23.73■■□□□ 1.39
CSNK1D-216ENST00000581108 ANKEF1Q9NU02 776 aa23.73■■□□□ 1.39
CSNK1D-216ENST00000581108 PRKAG3Q9UGI9 489 aa23.73■■□□□ 1.39
CSNK1D-216ENST00000581108 BARX2Q9UMQ3 279 aaPredicted RBP23.73■■□□□ 1.39
CSNK1D-216ENST00000581108 NT5C1B-RDH14C9J2C7 533 aa23.72■■□□□ 1.39
CSNK1D-216ENST00000581108 PI4K2BG5E9Z4 385 aa23.72■■□□□ 1.39
CSNK1D-216ENST00000581108 HOXA11P31270 313 aaPredicted RBP23.72■■□□□ 1.39
CSNK1D-216ENST00000581108 RAB27AP51159 221 aa23.72■■□□□ 1.39
CSNK1D-216ENST00000581108 BCAR1P56945 870 aa23.72■■□□□ 1.39
CSNK1D-216ENST00000581108 ZNF174Q15697 407 aa23.72■■□□□ 1.39
CSNK1D-216ENST00000581108 DUSP6Q16828 381 aa23.72■■□□□ 1.39
CSNK1D-216ENST00000581108 SLC39A11Q8N1S5 342 aa23.72■■□□□ 1.39
CSNK1D-216ENST00000581108 FBXO18Q8NFZ0 1043 aa23.72■■□□□ 1.39
CSNK1D-216ENST00000581108 FOXP1Q9H334 677 aaPredicted RBP23.72■■□□□ 1.39
CSNK1D-216ENST00000581108 SH2B1Q9NRF2 756 aaPredicted RBP23.72■■□□□ 1.39
CSNK1D-216ENST00000581108 PCDHB2Q9Y5E7 798 aa23.72■■□□□ 1.39
CSNK1D-216ENST00000581108 OFD1O75665 1012 aa23.71■■□□□ 1.39
CSNK1D-216ENST00000581108 SPATA31C1P0DKV0 1188 aa23.71■■□□□ 1.39
CSNK1D-216ENST00000581108 ALDH7A1P49419 539 aaKnown RBP23.71■■□□□ 1.39
CSNK1D-216ENST00000581108 HMGN5P82970 282 aaKnown RBP23.71■■□□□ 1.39
CSNK1D-216ENST00000581108 MXD4Q14582 209 aaPredicted RBP23.71■■□□□ 1.39
CSNK1D-216ENST00000581108 GLB1LQ6UWU2 654 aa23.71■■□□□ 1.39
CSNK1D-216ENST00000581108 ADHFE1Q8IWW8 467 aa23.71■■□□□ 1.39
CSNK1D-216ENST00000581108 FAM184AQ8NB25 1140 aa23.71■■□□□ 1.39
CSNK1D-216ENST00000581108 VN1R2Q8NFZ6 395 aa23.71■■□□□ 1.39
CSNK1D-216ENST00000581108 ENTPD7Q9NQZ7 604 aa23.71■■□□□ 1.39
CSNK1D-216ENST00000581108 RAPGEFL1Q9UHV5 662 aa23.71■■□□□ 1.39
CSNK1D-216ENST00000581108 INPP5FQ9Y2H2 1132 aa23.71■■□□□ 1.39
CSNK1D-216ENST00000581108 C19orf67A6NJJ6 358 aa23.7■■□□□ 1.38
CSNK1D-216ENST00000581108 HIDE1A8MVS5 230 aa23.7■■□□□ 1.38
CSNK1D-216ENST00000581108 DGAT1O75907 488 aa23.7■■□□□ 1.38
CSNK1D-216ENST00000581108 EYA4O95677 639 aa23.7■■□□□ 1.38
CSNK1D-216ENST00000581108 TECP42680 631 aa23.7■■□□□ 1.38
CSNK1D-216ENST00000581108 RBM25P49756 843 aaKnown RBP23.7■■□□□ 1.38
CSNK1D-216ENST00000581108 RARRES1P49788 294 aa23.7■■□□□ 1.38
CSNK1D-216ENST00000581108 COASYQ13057 564 aa23.7■■□□□ 1.38
CSNK1D-216ENST00000581108 NOMO2Q5JPE7 1267 aa23.7■■□□□ 1.38
CSNK1D-216ENST00000581108 UBXN11Q5T124 520 aa23.7■■□□□ 1.38
CSNK1D-216ENST00000581108 TMC7Q7Z402 723 aa23.7■■□□□ 1.38
CSNK1D-216ENST00000581108 CATSPER3Q86XQ3 398 aa23.7■■□□□ 1.38
CSNK1D-216ENST00000581108 CCDC43Q96MW1 224 aaKnown RBP23.7■■□□□ 1.38
CSNK1D-216ENST00000581108 TBC1D13Q9NVG8 400 aa23.7■■□□□ 1.38
CSNK1D-216ENST00000581108 ZC3H11AO75152 810 aaKnown RBP eCLIP23.69■■□□□ 1.38
CSNK1D-216ENST00000581108 XRCC6P12956 609 aaKnown RBP eCLIP23.69■■□□□ 1.38
CSNK1D-216ENST00000581108 ARL2P36404 184 aa23.69■■□□□ 1.38
CSNK1D-216ENST00000581108 PTENP60484 403 aa23.69■■□□□ 1.38
CSNK1D-216ENST00000581108 AGMOQ6ZNB7 445 aa23.69■■□□□ 1.38
CSNK1D-216ENST00000581108 MRPL10Q7Z7H8 261 aaKnown RBP23.69■■□□□ 1.38
CSNK1D-216ENST00000581108 SMRP1Q8NCR6 262 aa23.69■■□□□ 1.38
CSNK1D-216ENST00000581108 ASAP3Q8TDY4 903 aa23.69■■□□□ 1.38
CSNK1D-216ENST00000581108 PGBD4Q96DM1 585 aa23.69■■□□□ 1.38
CSNK1D-216ENST00000581108 CDCA3Q99618 268 aaPredicted RBP23.69■■□□□ 1.38
CSNK1D-216ENST00000581108 LRFN3Q9BTN0 628 aa23.69■■□□□ 1.38
CSNK1D-216ENST00000581108 NRDE2Q9H7Z3 1164 aa23.69■■□□□ 1.38
CSNK1D-216ENST00000581108 NGRNQ9NPE2 291 aaKnown RBP23.69■■□□□ 1.38
CSNK1D-216ENST00000581108 MED24O75448 989 aa23.68■■□□□ 1.38
CSNK1D-216ENST00000581108 GNL2Q13823 731 aaKnown RBP23.68■■□□□ 1.38
CSNK1D-216ENST00000581108 CAPSQ13938 189 aa23.68■■□□□ 1.38
CSNK1D-216ENST00000581108 TMEM173Q86WV6 379 aaPredicted RBP23.68■■□□□ 1.38
CSNK1D-216ENST00000581108 NOSTRINQ8IVI9 506 aa23.68■■□□□ 1.38
CSNK1D-216ENST00000581108 RSPH1Q8WYR4 309 aa23.68■■□□□ 1.38
CSNK1D-216ENST00000581108 C11orf16Q9NQ32 467 aa23.68■■□□□ 1.38
CSNK1D-216ENST00000581108 FAM86C2PA6NEL3 165 aa23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 INO80B-WBP1J3KQ70 363 aa23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 TSPAN1O60635 241 aa23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 ERLIN2O94905 339 aa23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 OR52Z1P0C646 297 aa23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 GLRA2P23416 452 aa23.67■■□□□ 1.38
CSNK1D-216ENST00000581108 AFF1P51825 1210 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms