RNA–Protein interactions for RNA: ENST00000580824.5

CDC6-204, Transcript of cell division cycle 6, humanhuman

TSL 3

Gene CDC6, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-204ENST00000580824 TOP1MTQ969P6 601 aa17.03■□□□□ 0.32
CDC6-204ENST00000580824 CCDC51Q96ER9 411 aa17.03■□□□□ 0.32
CDC6-204ENST00000580824 ZNF668Q96K58 619 aaPredicted RBP17.03■□□□□ 0.32
CDC6-204ENST00000580824 LRRC27Q9C0I9 530 aa17.03■□□□□ 0.32
CDC6-204ENST00000580824 MINDY3Q9H8M7 445 aa17.03■□□□□ 0.32
CDC6-204ENST00000580824 AGPAT5Q9NUQ2 364 aa17.03■□□□□ 0.32
CDC6-204ENST00000580824 DENND3A2RUS2 1198 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 LRRIQ4A6NIV6 560 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 GJB5O95377 273 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 PLS3P13797 630 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 ZSCAN20P17040 1043 aaPredicted RBP17.02■□□□□ 0.32
CDC6-204ENST00000580824 DEFB103AP81534 67 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 RAB30Q15771 203 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 CSPP1Q1MSJ5 1256 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.02■□□□□ 0.32
CDC6-204ENST00000580824 CATSPER4Q7RTX7 472 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 RTN4RL1Q86UN2 441 aaPredicted RBP17.02■□□□□ 0.32
CDC6-204ENST00000580824 DEPTORQ8TB45 409 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 REEP2Q9BRK0 252 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 FZD8Q9H461 694 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 PRMT7Q9NVM4 692 aaPredicted RBP17.02■□□□□ 0.32
CDC6-204ENST00000580824 KBTBD4Q9NVX7 518 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 LARSQ9P2J5 1176 aaKnown RBP17.02■□□□□ 0.32
CDC6-204ENST00000580824 ARHGAP28Q9P2N2 729 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 USP25Q9UHP3 1055 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 KCNH3Q9ULD8 1083 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 HPSEQ9Y251 543 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 PCDHA11Q9Y5I1 949 aa17.02■□□□□ 0.32
CDC6-204ENST00000580824 GBF1Q92538 1859 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 TMEM265A0A087WTH1 108 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 C9IYK1 514 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 H0YCG3 227 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 INO80B-WBP1J3KQ70 363 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 MGEA5O60502 916 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 ERLIN2O94905 339 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 NPTX2P47972 431 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 SARSP49591 514 aaKnown RBP17.01■□□□□ 0.31
CDC6-204ENST00000580824 FAM189BP81408 668 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 GIT2Q14161 759 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 AMHR2Q16671 573 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 CNNM4Q6P4Q7 775 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 PDILTQ8N807 584 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 SLC17A8Q8NDX2 589 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 RSPH1Q8WYR4 309 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 ADAM2Q99965 735 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 CCDC113Q9H0I3 377 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 ELAC1Q9H777 363 aaKnown RBP17.01■□□□□ 0.31
CDC6-204ENST00000580824 PARVGQ9HBI0 331 aa17.01■□□□□ 0.31
CDC6-204ENST00000580824 LAMA2P24043 3122 aaKnown RBP17■□□□□ 0.31
CDC6-204ENST00000580824 POLR2DO15514 142 aaKnown RBP17■□□□□ 0.31
CDC6-204ENST00000580824 TSPAN1O60635 241 aa17■□□□□ 0.31
CDC6-204ENST00000580824 TBCAO75347 108 aaKnown RBP17■□□□□ 0.31
CDC6-204ENST00000580824 CSDE1O75534 798 aaKnown RBP17■□□□□ 0.31
CDC6-204ENST00000580824 KRT18P05783 430 aaKnown RBP17■□□□□ 0.31
CDC6-204ENST00000580824 STAG3L1P0CL83 205 aa17■□□□□ 0.31
CDC6-204ENST00000580824 SKIP12755 728 aa17■□□□□ 0.31
CDC6-204ENST00000580824 PFKFB1P16118 471 aa17■□□□□ 0.31
CDC6-204ENST00000580824 HOXA11P31270 313 aaPredicted RBP17■□□□□ 0.31
CDC6-204ENST00000580824 ABCD1P33897 745 aa17■□□□□ 0.31
CDC6-204ENST00000580824 RAB27AP51159 221 aa17■□□□□ 0.31
CDC6-204ENST00000580824 SMTNP53814 917 aa17■□□□□ 0.31
CDC6-204ENST00000580824 HTRA4P83105 476 aaPredicted RBP17■□□□□ 0.31
CDC6-204ENST00000580824 AMPD3Q01432 767 aa17■□□□□ 0.31
CDC6-204ENST00000580824 NCBP1Q09161 790 aaKnown RBP17■□□□□ 0.31
CDC6-204ENST00000580824 MAPK6Q16659 721 aa17■□□□□ 0.31
CDC6-204ENST00000580824 FAM109BQ6ICB4 259 aaPredicted RBP17■□□□□ 0.31
CDC6-204ENST00000580824 NPAS4Q8IUM7 802 aa17■□□□□ 0.31
CDC6-204ENST00000580824 MYOCDQ8IZQ8 938 aa17■□□□□ 0.31
CDC6-204ENST00000580824 PANK2Q9BZ23 570 aa17■□□□□ 0.31
CDC6-204ENST00000580824 TMEM134Q9H6X4 195 aa17■□□□□ 0.31
CDC6-204ENST00000580824 SEL1LQ9UBV2 794 aa17■□□□□ 0.31
CDC6-204ENST00000580824 ADGRA3Q8IWK6 1321 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 CNTNAP2Q9UHC6 1331 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 A0A0U1RQF3 1178 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 FRMD3A2A2Y4 597 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 MYMKA6NI61 221 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 ACKR2O00590 384 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 ZNF623O75123 536 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 FAM13AO94988 1023 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 PEX3P56589 373 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 DHX8Q14562 1220 aaKnown RBP16.99■□□□□ 0.31
CDC6-204ENST00000580824 NOTUMQ6P988 496 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 TMEM87AQ8NBN3 555 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 MRPS27Q92552 414 aaKnown RBP16.99■□□□□ 0.31
CDC6-204ENST00000580824 DDX12PQ92771 950 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 DHX58Q96C10 678 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 DNAJC19Q96DA6 116 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 RAD9AQ99638 391 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 PBX4Q9BYU1 374 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 RC3H2Q9HBD1 1191 aaKnown RBP16.99■□□□□ 0.31
CDC6-204ENST00000580824 GDPD2Q9HCC8 539 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 KMT5AQ9NQR1 393 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 TMEM161AQ9NX61 479 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 MSRAQ9UJ68 235 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 PIN4Q9Y237 131 aaKnown RBP16.99■□□□□ 0.31
CDC6-204ENST00000580824 INSL6Q9Y581 213 aa16.99■□□□□ 0.31
CDC6-204ENST00000580824 NPHP3-ACAD11A0A0J9YXS1 232 aa16.98■□□□□ 0.31
CDC6-204ENST00000580824 CCDC169A6NNP5 214 aa16.98■□□□□ 0.31
CDC6-204ENST00000580824 SOX1O00570 391 aaPredicted RBP16.98■□□□□ 0.31
CDC6-204ENST00000580824 EOMESO95936 686 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms