RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-208ENST00000580584 PTGDRQ13258 359 aa17.26■□□□□ 0.35
PMP22-208ENST00000580584 MXD4Q14582 209 aaPredicted RBP17.26■□□□□ 0.35
PMP22-208ENST00000580584 ADGRD2Q7Z7M1 963 aa17.26■□□□□ 0.35
PMP22-208ENST00000580584 PABPC5Q96DU9 382 aaKnown RBP17.26■□□□□ 0.35
PMP22-208ENST00000580584 POLR3CQ9BUI4 534 aaPredicted RBP17.26■□□□□ 0.35
PMP22-208ENST00000580584 TRAIPQ9BWF2 469 aa17.26■□□□□ 0.35
PMP22-208ENST00000580584 POLR3FQ9H1D9 316 aaPredicted RBP17.26■□□□□ 0.35
PMP22-208ENST00000580584 GPRC5CQ9NQ84 441 aa17.26■□□□□ 0.35
PMP22-208ENST00000580584 CLDND1Q9NY35 253 aa17.26■□□□□ 0.35
PMP22-208ENST00000580584 H3BQV1 296 aa17.25■□□□□ 0.35
PMP22-208ENST00000580584 TNFRSF10AO00220 468 aa17.25■□□□□ 0.35
PMP22-208ENST00000580584 GLRA2P23416 452 aa17.25■□□□□ 0.35
PMP22-208ENST00000580584 RPA1P27694 616 aa17.25■□□□□ 0.35
PMP22-208ENST00000580584 HOXA11P31270 313 aaPredicted RBP17.25■□□□□ 0.35
PMP22-208ENST00000580584 ARL2P36404 184 aa17.25■□□□□ 0.35
PMP22-208ENST00000580584 FXR2P51116 673 aaKnown RBP eCLIP17.25■□□□□ 0.35
PMP22-208ENST00000580584 COL19A1Q14993 1142 aa17.25■□□□□ 0.35
PMP22-208ENST00000580584 ECM1Q16610 540 aa17.25■□□□□ 0.35
PMP22-208ENST00000580584 LEXMQ3ZCV2 418 aa17.25■□□□□ 0.35
PMP22-208ENST00000580584 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.25■□□□□ 0.35
PMP22-208ENST00000580584 IGFLR1Q9H665 355 aa17.25■□□□□ 0.35
PMP22-208ENST00000580584 DBR1Q9UK59 544 aaKnown RBP17.25■□□□□ 0.35
PMP22-208ENST00000580584 SMC3Q9UQE7 1217 aa17.25■□□□□ 0.35
PMP22-208ENST00000580584 PCDHB2Q9Y5E7 798 aa17.25■□□□□ 0.35
PMP22-208ENST00000580584 ATG2AQ2TAZ0 1938 aa17.25■□□□□ 0.35
PMP22-208ENST00000580584 FNDC1Q4ZHG4 1894 aaPredicted RBP17.24■□□□□ 0.35
PMP22-208ENST00000580584 INO80B-WBP1J3KQ70 363 aa17.24■□□□□ 0.35
PMP22-208ENST00000580584 LINC01565O15544 149 aa17.24■□□□□ 0.35
PMP22-208ENST00000580584 TSPAN1O60635 241 aa17.24■□□□□ 0.35
PMP22-208ENST00000580584 ERLIN2O94905 339 aa17.24■□□□□ 0.35
PMP22-208ENST00000580584 XRCC6P12956 609 aaKnown RBP eCLIP17.24■□□□□ 0.35
PMP22-208ENST00000580584 CCT6AP40227 531 aaKnown RBP17.24■□□□□ 0.35
PMP22-208ENST00000580584 PTENP60484 403 aa17.24■□□□□ 0.35
PMP22-208ENST00000580584 MBTD1Q05BQ5 628 aa17.24■□□□□ 0.35
PMP22-208ENST00000580584 TFDP1Q14186 410 aa17.24■□□□□ 0.35
PMP22-208ENST00000580584 UBXN11Q5T124 520 aa17.24■□□□□ 0.35
PMP22-208ENST00000580584 HAUS3Q68CZ6 603 aa17.24■□□□□ 0.35
PMP22-208ENST00000580584 KCNT2Q6UVM3 1135 aa17.24■□□□□ 0.35
PMP22-208ENST00000580584 ZNF558Q96NG5 402 aa17.24■□□□□ 0.35
PMP22-208ENST00000580584 NACC1Q96RE7 527 aa17.24■□□□□ 0.35
PMP22-208ENST00000580584 LRWD1Q9UFC0 647 aa17.24■□□□□ 0.35
PMP22-208ENST00000580584 INPP5FQ9Y2H2 1132 aa17.24■□□□□ 0.35
PMP22-208ENST00000580584 ARHGEF35A5YM69 484 aa17.23■□□□□ 0.35
PMP22-208ENST00000580584 PP2D1A8MPX8 630 aa17.23■□□□□ 0.35
PMP22-208ENST00000580584 SKIP12755 728 aa17.23■□□□□ 0.35
PMP22-208ENST00000580584 RAB27AP51159 221 aa17.23■□□□□ 0.35
PMP22-208ENST00000580584 DLX2Q07687 328 aaPredicted RBP17.23■□□□□ 0.35
PMP22-208ENST00000580584 CLUL1Q15846 466 aa17.23■□□□□ 0.35
PMP22-208ENST00000580584 IL17AQ16552 155 aa17.23■□□□□ 0.35
PMP22-208ENST00000580584 CSPP1Q1MSJ5 1256 aa17.23■□□□□ 0.35
PMP22-208ENST00000580584 CTC1Q2NKJ3 1217 aa17.23■□□□□ 0.35
PMP22-208ENST00000580584 GLB1LQ6UWU2 654 aa17.23■□□□□ 0.35
PMP22-208ENST00000580584 RBM23Q86U06 439 aaKnown RBP17.23■□□□□ 0.35
PMP22-208ENST00000580584 CPB2Q96IY4 423 aa17.23■□□□□ 0.35
PMP22-208ENST00000580584 MRPL9Q9BYD2 267 aaKnown RBP17.23■□□□□ 0.35
PMP22-208ENST00000580584 TLR9Q9NR96 1032 aa17.23■□□□□ 0.35
PMP22-208ENST00000580584 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.23■□□□□ 0.35
PMP22-208ENST00000580584 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.23■□□□□ 0.35
PMP22-208ENST00000580584 B4GALT5O43286 388 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 ZNF623O75123 536 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 TBX10O75333 385 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 IL9P15248 144 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 LTBRP36941 435 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 NRIP1P48552 1158 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 ERVFC1P60507 584 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 UBE3AQ05086 875 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 AMHR2Q16671 573 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 NOMO2Q5JPE7 1267 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 PTCRAQ6ISU1 281 aaPredicted RBP17.22■□□□□ 0.35
PMP22-208ENST00000580584 PADI6Q6TGC4 694 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 AGMOQ6ZNB7 445 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 IFNLR1Q8IU57 520 aaPredicted RBP17.22■□□□□ 0.35
PMP22-208ENST00000580584 IGSF22Q8N9C0 903 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 MCPH1Q8NEM0 835 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 MICAL1Q8TDZ2 1067 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 SNX29Q8TEQ0 813 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 EIF2AQ9BY44 585 aaKnown RBP17.22■□□□□ 0.35
PMP22-208ENST00000580584 BACH2Q9BYV9 841 aa17.22■□□□□ 0.35
PMP22-208ENST00000580584 BDP1A6H8Y1 2624 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 PLXNA4Q9HCM2 1894 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 LRRIQ4A6NIV6 560 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 NT5C1B-RDH14C9J2C7 533 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 ZC3H11AO75152 810 aaKnown RBP eCLIP17.21■□□□□ 0.35
PMP22-208ENST00000580584 OFD1O75665 1012 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 CDC25AP30304 524 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 PPM1AP35813 382 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 AFF1P51825 1210 aaKnown RBP17.21■□□□□ 0.35
PMP22-208ENST00000580584 BCAR1P56945 870 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 PLCB3Q01970 1234 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 RILPL1Q5EBL4 403 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 PLPP4Q5VZY2 271 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 SLC39A11Q8N1S5 342 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 BSNDQ8WZ55 320 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 MRPS27Q92552 414 aaKnown RBP17.21■□□□□ 0.35
PMP22-208ENST00000580584 PPP2R3CQ969Q6 453 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 PGBD4Q96DM1 585 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 TCF25Q9BQ70 676 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 BHMT2Q9H2M3 363 aa17.21■□□□□ 0.35
PMP22-208ENST00000580584 DDX19AQ9NUU7 478 aaKnown RBP17.21■□□□□ 0.35
PMP22-208ENST00000580584 TBC1D13Q9NVG8 400 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms