RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 SLC9A1P19634 815 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CNGA1P29973 690 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 NAMPTP43490 491 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 MAP2K5Q13163 448 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 TSR1Q2NL82 804 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 DPY19L2P1Q6NXN4 242 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PDXDC1Q6P996 788 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 RRAGAQ7L523 313 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CACNA2D4Q7Z3S7 1137 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 XXYLT1Q8NBI6 393 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 AFG1LQ8WV93 481 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ATRIPQ8WXE1 791 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ABHD16BQ9H3Z7 469 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 SMARCAD1Q9H4L7 1026 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 GOLGA8IPA6NC78 632 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 GOLGA8JA6NMD2 632 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 HNRNPDLO14979 420 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ADRB2P07550 413 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 SMPD1P17405 629 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 POLR2FP61218 127 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 SNRPFP62306 86 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 GRM1Q13255 1194 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ACVR2BQ13705 512 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CAPSQ13938 189 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 EXOC3L4Q17RC7 722 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 LRRC71Q8N4P6 559 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 SAAL1Q96ER3 474 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 FLRT1Q9NZU1 646 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 GCNT4Q9P109 453 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 USP20Q9Y2K6 914 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ZNF286BP0CG31 522 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PON1P27169 355 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 FMO5P49326 533 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 SLC26A2P50443 739 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 DLG4P78352 724 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CRHR2Q13324 411 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PPP2R5AQ15172 486 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CBWD6Q4V339 395 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CBWD3Q5JTY5 395 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CBWD5Q5RIA9 395 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PPTC7Q8NI37 304 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 DEPTORQ8TB45 409 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 EMID1Q96A84 441 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ZBTB10Q96DT7 871 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 EDEM3Q9BZQ6 932 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ZNHIT6Q9NWK9 470 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PLAGL2Q9UPG8 496 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PPME1Q9Y570 386 aa16.19■□□□□ 0.18
CDK5RAP3-218ENST00000580391 H0YCG3 227 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 NDUFA10O95299 355 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 EDN1P05305 212 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PLEKP08567 350 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 HNRNPH3P31942 346 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 INHBEP58166 350 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 SREBF2Q12772 1141 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 MKRN4PQ13434 485 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 GBP6Q6ZN66 633 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 INTS8Q75QN2 995 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CBWD2Q8IUF1 395 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PLEKHO2Q8TD55 490 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ZNF592Q92610 1267 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 BICD1Q96G01 975 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 RNPEPQ9H4A4 650 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 SUGCTQ9HAC7 445 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 SIX2Q9NPC8 291 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 SLC5A4Q9NY91 659 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 IGKV6-21A0A0C4DH24 114 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 KRT13P13646 458 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CCL14Q16627 93 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 DUSP28Q4G0W2 176 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 SMC1BQ8NDV3 1235 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CCDC102AQ96A19 550 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ZFYVE28Q9HCC9 887 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PLCB1Q9NQ66 1216 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ERAP1Q9NZ08 941 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ARHGAP20Q9P2F6 1191 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 AJAP1Q9UKB5 411 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 REXO2Q9Y3B8 237 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 FHOD1Q9Y613 1164 aa16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 EPN1Q9Y6I3 576 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-218ENST00000580391 GTPBP10A4D1E9 387 aaKnown RBP16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 HBP1O60381 514 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 MYL7Q01449 175 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 SNRNP35Q16560 246 aaKnown RBP16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 BRDTQ58F21 947 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PRAMEF19Q5SWL8 479 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 C1orf220Q5T0J3 134 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PAXIP1Q6ZW49 1069 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 OR6J1Q8NGC5 347 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PRPF31Q8WWY3 499 aaKnown RBP16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 POMGNT1Q8WZA1 660 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 USP6NLQ92738 828 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 KCNN1Q92952 543 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 NHEJ1Q9H9Q4 299 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 PHLPP2Q6ZVD8 1323 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 TMEM88BA6NKF7 163 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 MAPK13O15264 365 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 UCHL3P15374 230 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CYP2B6P20813 491 aa16.17■□□□□ 0.18
CDK5RAP3-218ENST00000580391 LIG4P49917 911 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms