RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 SP100P23497 879 aaPredicted RBP20.07■□□□□ 0.8
MKS1-209ENST00000580127 NONOQ15233 471 aaKnown RBP eCLIP20.07■□□□□ 0.8
MKS1-209ENST00000580127 RUFY3Q7L099 469 aa20.07■□□□□ 0.8
MKS1-209ENST00000580127 KRT25Q7Z3Z0 450 aa20.07■□□□□ 0.8
MKS1-209ENST00000580127 ZNF274Q96GC6 653 aaPredicted RBP20.07■□□□□ 0.8
MKS1-209ENST00000580127 IGSF21Q96ID5 467 aa20.07■□□□□ 0.8
MKS1-209ENST00000580127 FAM20AQ96MK3 541 aa20.07■□□□□ 0.8
MKS1-209ENST00000580127 NCOA5Q9HCD5 579 aaKnown RBP20.07■□□□□ 0.8
MKS1-209ENST00000580127 FAM105AQ9NUU6 356 aa20.07■□□□□ 0.8
MKS1-209ENST00000580127 DBR1Q9UK59 544 aaKnown RBP20.07■□□□□ 0.8
MKS1-209ENST00000580127 USTQ9Y2C2 406 aa20.07■□□□□ 0.8
MKS1-209ENST00000580127 EPB41L2O43491 1005 aaKnown RBP20.06■□□□□ 0.8
MKS1-209ENST00000580127 ALDH2P05091 517 aa20.06■□□□□ 0.8
MKS1-209ENST00000580127 CTSAP10619 480 aa20.06■□□□□ 0.8
MKS1-209ENST00000580127 NCBP1Q09161 790 aaKnown RBP20.06■□□□□ 0.8
MKS1-209ENST00000580127 RARS2Q5T160 578 aaKnown RBP20.06■□□□□ 0.8
MKS1-209ENST00000580127 ELMSAN1Q6PJG2 1045 aa20.06■□□□□ 0.8
MKS1-209ENST00000580127 CABP7Q86V35 215 aa20.06■□□□□ 0.8
MKS1-209ENST00000580127 TDRD5Q8NAT2 981 aaKnown RBP20.06■□□□□ 0.8
MKS1-209ENST00000580127 ACSF2Q96CM8 615 aaPredicted RBP20.06■□□□□ 0.8
MKS1-209ENST00000580127 NAP1L4Q99733 375 aaKnown RBP20.06■□□□□ 0.8
MKS1-209ENST00000580127 EMILIN2Q9BXX0 1053 aa20.06■□□□□ 0.8
MKS1-209ENST00000580127 DDX25Q9UHL0 483 aaKnown RBP20.06■□□□□ 0.8
MKS1-209ENST00000580127 INPP5FQ9Y2H2 1132 aa20.06■□□□□ 0.8
MKS1-209ENST00000580127 QARSP47897 775 aaKnown RBP20.05■□□□□ 0.8
MKS1-209ENST00000580127 TCF15Q12870 199 aa20.05■□□□□ 0.8
MKS1-209ENST00000580127 DRP2Q13474 957 aa20.05■□□□□ 0.8
MKS1-209ENST00000580127 OTUD6AQ7L8S5 288 aa20.05■□□□□ 0.8
MKS1-209ENST00000580127 SKAP1Q86WV1 359 aa20.05■□□□□ 0.8
MKS1-209ENST00000580127 ZDHHC14Q8IZN3 488 aa20.05■□□□□ 0.8
MKS1-209ENST00000580127 DAGLBQ8NCG7 672 aa20.05■□□□□ 0.8
MKS1-209ENST00000580127 GJA10Q969M2 543 aa20.05■□□□□ 0.8
MKS1-209ENST00000580127 NLRP4Q96MN2 994 aa20.05■□□□□ 0.8
MKS1-209ENST00000580127 ZBP1Q9H171 429 aa20.05■□□□□ 0.8
MKS1-209ENST00000580127 POMKQ9H5K3 350 aa20.05■□□□□ 0.8
MKS1-209ENST00000580127 TBC1D13Q9NVG8 400 aa20.05■□□□□ 0.8
MKS1-209ENST00000580127 DPP7Q9UHL4 492 aa20.05■□□□□ 0.8
MKS1-209ENST00000580127 SSX2IPQ9Y2D8 614 aa20.05■□□□□ 0.8
MKS1-209ENST00000580127 CCDC194A0A1B0GVG4 234 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 ASAP2O43150 1006 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 EDIL3O43854 480 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 OFD1O75665 1012 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 CDKL5O76039 1030 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 TDP2O95551 362 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 GALTP07902 379 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 KIAA1841Q6NSI8 718 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 SRGAP1Q7Z6B7 1085 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 TCP11Q8WWU5 503 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 GBP3Q9H0R5 595 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 MFSD1Q9H3U5 465 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 NRDE2Q9H7Z3 1164 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 ZSWIM6Q9HCJ5 1215 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 UBN1Q9NPG3 1134 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 CYP26B1Q9NR63 512 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 LIMD1Q9UGP4 676 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 PCDHB2Q9Y5E7 798 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 COL4A3BPQ9Y5P4 624 aa20.04■□□□□ 0.8
MKS1-209ENST00000580127 WDFY4Q6ZS81 3184 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 C2CD4DB7Z1M9 353 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 GAS2O43903 313 aaKnown RBP20.03■□□□□ 0.8
MKS1-209ENST00000580127 STBD1O95210 358 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 P4HBP07237 508 aaKnown RBP20.03■□□□□ 0.8
MKS1-209ENST00000580127 GCFC2P16383 781 aaKnown RBP20.03■□□□□ 0.8
MKS1-209ENST00000580127 KLRC2P26717 231 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 RFC5P40937 340 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 VCPP55072 806 aaKnown RBP20.03■□□□□ 0.8
MKS1-209ENST00000580127 LONRF3Q496Y0 759 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 B3GNT9Q6UX72 402 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 ANO5Q75V66 913 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 OTOP3Q7RTS5 596 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 CNNM3Q8NE01 707 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 ETNPPLQ8TBG4 499 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 PSPC1Q8WXF1 523 aaKnown RBP20.03■□□□□ 0.8
MKS1-209ENST00000580127 LPPQ93052 612 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 CEP170P1Q96L14 293 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 MBOAT7Q96N66 472 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 CEP89Q96ST8 783 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 SH2D3AQ9BRG2 576 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 FAN1Q9Y2M0 1017 aa20.03■□□□□ 0.8
MKS1-209ENST00000580127 CNTNAP2Q9UHC6 1331 aa20.02■□□□□ 0.8
MKS1-209ENST00000580127 BAG4O95429 457 aaKnown RBP20.02■□□□□ 0.8
MKS1-209ENST00000580127 SRGAP2CP0DJJ0 459 aa20.02■□□□□ 0.8
MKS1-209ENST00000580127 PPP2R5CQ13362 524 aa20.02■□□□□ 0.8
MKS1-209ENST00000580127 PCBP1Q15365 356 aaKnown RBP eCLIP20.02■□□□□ 0.8
MKS1-209ENST00000580127 LETM2Q2VYF4 491 aa20.02■□□□□ 0.8
MKS1-209ENST00000580127 C12orf76Q8N812 135 aaPredicted RBP20.02■□□□□ 0.8
MKS1-209ENST00000580127 SLC22A17Q8WUG5 538 aa20.02■□□□□ 0.8
MKS1-209ENST00000580127 PRPF31Q8WWY3 499 aaKnown RBP20.02■□□□□ 0.8
MKS1-209ENST00000580127 SFXN1Q9H9B4 322 aa20.02■□□□□ 0.8
MKS1-209ENST00000580127 MRPL17Q9NRX2 175 aaKnown RBP20.02■□□□□ 0.8
MKS1-209ENST00000580127 TMEM150BA6NC51 233 aa20.01■□□□□ 0.79
MKS1-209ENST00000580127 GALR2O43603 387 aaPredicted RBP20.01■□□□□ 0.79
MKS1-209ENST00000580127 NR1I2O75469 434 aa20.01■□□□□ 0.79
MKS1-209ENST00000580127 EPCAMP16422 314 aa20.01■□□□□ 0.79
MKS1-209ENST00000580127 INF2Q27J81 1249 aa20.01■□□□□ 0.79
MKS1-209ENST00000580127 MRPL10Q7Z7H8 261 aaKnown RBP20.01■□□□□ 0.79
MKS1-209ENST00000580127 KSR1Q8IVT5 923 aa20.01■□□□□ 0.79
MKS1-209ENST00000580127 AUTS2Q8WXX7 1259 aa20.01■□□□□ 0.79
MKS1-209ENST00000580127 PHOX2BQ99453 314 aa20.01■□□□□ 0.79
MKS1-209ENST00000580127 TMEM175Q9BSA9 504 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms