RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 KCTD10Q9H3F6 313 aa18.4■□□□□ 0.54
CDK5RAP3-215ENST00000579780 TMEM134Q9H6X4 195 aa18.4■□□□□ 0.54
CDK5RAP3-215ENST00000579780 TYW1Q9NV66 732 aaKnown RBP18.4■□□□□ 0.54
CDK5RAP3-215ENST00000579780 SMTNL1A8MU46 457 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 BECN2A8MW95 431 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 HOXD13P35453 343 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 PHKA2P46019 1235 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 GPC3P51654 580 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 PTENP60484 403 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 GSE1Q14687 1217 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 NCAPHQ15003 741 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 ZC2HC1CQ53FD0 456 aaPredicted RBP18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 TTI2Q6NXR4 508 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 RPAINQ86UA6 219 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 NELFCDQ8IXH7 590 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 NME8Q8N427 588 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 RNF214Q8ND24 703 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 VTI1AQ96AJ9 217 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 NLRP4Q96MN2 994 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 ACCSQ96QU6 501 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 MED15Q96RN5 788 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 TSG101Q99816 390 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 CCDC113Q9H0I3 377 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 FAM49AQ9H0Q0 323 aaPredicted RBP18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 SEMA6BQ9H3T3 888 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 TBX20Q9UMR3 447 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 EXOC7Q9UPT5 735 aa18.39■□□□□ 0.53
CDK5RAP3-215ENST00000579780 TRIM49BA6NDI0 452 aa18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 GOLGA6L3A6NEY3 463 aa18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 ARVCFO00192 962 aa18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 PDXKO00764 312 aa18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 VTNP04004 478 aa18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 MNX1P50219 401 aaPredicted RBP18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 SNRPFP62306 86 aaKnown RBP18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 ZNF200P98182 395 aaPredicted RBP18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 NFIL3Q16649 462 aa18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 EDRF1Q3B7T1 1238 aa18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 SPATA1Q5VX52 437 aa18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 TAS1R3Q7RTX0 852 aa18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 LUZP1Q86V48 1076 aa18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 KSR1Q8IVT5 923 aa18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 GOLGA5Q8TBA6 731 aa18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 CTAGE1Q96RT6 745 aa18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 CGNQ9P2M7 1197 aaKnown RBP18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 TRAF3IP3Q9Y228 551 aa18.38■□□□□ 0.53
CDK5RAP3-215ENST00000579780 GOLGA6L19H0YKK7 550 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 CAND2O75155 1236 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 PIGRP01833 764 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 PMS1P54277 932 aaKnown RBP18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 STX17P56962 302 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 TPM4P67936 248 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 KCNA1Q09470 495 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 STRN3Q13033 797 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 PTK7Q13308 1070 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 PTGISQ16647 500 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 HS2ST1Q7LGA3 356 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 RSPH3Q86UC2 560 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 ZC3H3Q8IXZ2 948 aaKnown RBP18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 NOC3LQ8WTT2 800 aaKnown RBP18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 DNAJB3Q8WWF6 145 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 GBP3Q9H0R5 595 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 IFT122Q9HBG6 1241 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 NFE2L3Q9Y4A8 694 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 MROH7Q68CQ1 1323 aa18.37■□□□□ 0.53
CDK5RAP3-215ENST00000579780 BRCA2P51587 3418 aa18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 CALUO43852 315 aaPredicted RBP18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 TFRCP02786 760 aaKnown RBP18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 SRGAP2CP0DJJ0 459 aa18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 COL6A1P12109 1028 aa18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 NLRP11P59045 1033 aaKnown RBP18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 MBTD1Q05BQ5 628 aa18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 MAPK6Q16659 721 aa18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 SRGAP1Q7Z6B7 1085 aa18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 C12orf56Q8IXR9 622 aa18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 SYCP3Q8IZU3 236 aa18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 NLRP7Q8WX94 980 aa18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 SCLT1Q96NL6 688 aa18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 TMEM106CQ9BVX2 250 aa18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 ADAMTS10Q9H324 1103 aa18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 NOD1Q9Y239 953 aa18.36■□□□□ 0.53
CDK5RAP3-215ENST00000579780 TANC1Q9C0D5 1861 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 A0A087WZ62 844 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 K7ERI5 159 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 TGFB1I1O43294 461 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 GPR32O75388 356 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 PRKCBP05771 671 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 CDK7P50613 346 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 MRPS6P82932 125 aaKnown RBP18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 SNX17Q15036 470 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 PCBP1Q15365 356 aaKnown RBP eCLIP18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 FAM187BQ17R55 369 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 UVSSAQ2YD98 709 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 ANKRD40Q6AI12 368 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 LRRC55Q6ZSA7 311 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 TMEM174Q8WUU8 243 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 PRIMPOLQ96LW4 560 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 DUSP9Q99956 384 aaKnown RBP18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 FDXACB1Q9BRP7 624 aaPredicted RBP18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 THAP9Q9H5L6 903 aa18.35■□□□□ 0.53
CDK5RAP3-215ENST00000579780 TRMT13Q9NUP7 481 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms