RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 NLRP7Q8WX94 980 aa14.96□□□□□ -0.01
CDK5RAP3-213ENST00000579605 LNPKQ9C0E8 428 aa14.96□□□□□ -0.01
CDK5RAP3-213ENST00000579605 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.96□□□□□ -0.01
CDK5RAP3-213ENST00000579605 RAB23Q9ULC3 237 aa14.96□□□□□ -0.01
CDK5RAP3-213ENST00000579605 CACNA1IQ9P0X4 2223 aa14.96□□□□□ -0.02
CDK5RAP3-213ENST00000579605 ANHXE9PGG2 379 aa14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 B4GALT3O60512 393 aa14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 LILRB5O75023 590 aa14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 DARSP14868 501 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 TMOD1P28289 359 aa14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 ZNF76P36508 570 aa14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 PHKA2P46019 1235 aa14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 MLF2Q15773 248 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 CEP55Q53EZ4 464 aa14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 ELMSAN1Q6PJG2 1045 aa14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 PARM1Q6UWI2 310 aa14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 TAS1R1Q7RTX1 841 aa14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 PALB2Q86YC2 1186 aa14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 CCDC82Q8N4S0 544 aa14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 SRBD1Q8N5C6 995 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 PHKBQ93100 1093 aa14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 ZNF707Q96C28 371 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 FAN1Q9Y2M0 1017 aa14.95□□□□□ -0.02
CDK5RAP3-213ENST00000579605 MAGEB2O15479 319 aa14.94□□□□□ -0.02
CDK5RAP3-213ENST00000579605 TEX28O15482 410 aa14.94□□□□□ -0.02
CDK5RAP3-213ENST00000579605 OFD1O75665 1012 aa14.94□□□□□ -0.02
CDK5RAP3-213ENST00000579605 GLUD1P00367 558 aa14.94□□□□□ -0.02
CDK5RAP3-213ENST00000579605 ALDH2P05091 517 aa14.94□□□□□ -0.02
CDK5RAP3-213ENST00000579605 URODP06132 367 aa14.94□□□□□ -0.02
CDK5RAP3-213ENST00000579605 ADH1AP07327 375 aa14.94□□□□□ -0.02
CDK5RAP3-213ENST00000579605 GPC3P51654 580 aa14.94□□□□□ -0.02
CDK5RAP3-213ENST00000579605 SART3Q15020 963 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-213ENST00000579605 TWF2Q6IBS0 349 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-213ENST00000579605 CYP26C1Q6V0L0 522 aa14.94□□□□□ -0.02
CDK5RAP3-213ENST00000579605 FGF14Q92915 247 aa14.94□□□□□ -0.02
CDK5RAP3-213ENST00000579605 DPP7Q9UHL4 492 aa14.94□□□□□ -0.02
CDK5RAP3-213ENST00000579605 CARNS1A5YM72 827 aa14.93□□□□□ -0.02
CDK5RAP3-213ENST00000579605 GDF9O60383 454 aa14.93□□□□□ -0.02
CDK5RAP3-213ENST00000579605 DDHD2O94830 711 aa14.93□□□□□ -0.02
CDK5RAP3-213ENST00000579605 ZBTB41Q5SVQ8 909 aa14.93□□□□□ -0.02
CDK5RAP3-213ENST00000579605 PRR23BQ6ZRT6 265 aa14.93□□□□□ -0.02
CDK5RAP3-213ENST00000579605 HEATR3Q7Z4Q2 680 aa14.93□□□□□ -0.02
CDK5RAP3-213ENST00000579605 RALYLQ86SE5 291 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-213ENST00000579605 GLYCTKQ8IVS8 523 aa14.93□□□□□ -0.02
CDK5RAP3-213ENST00000579605 FAM193BQ96PV7 902 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-213ENST00000579605 RPS6KC1Q96S38 1066 aa14.93□□□□□ -0.02
CDK5RAP3-213ENST00000579605 NT5C3AQ9H0P0 336 aa14.93□□□□□ -0.02
CDK5RAP3-213ENST00000579605 RWDD1Q9H446 243 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-213ENST00000579605 LTB4R2Q9NPC1 389 aa14.93□□□□□ -0.02
CDK5RAP3-213ENST00000579605 FANCMQ8IYD8 2048 aa14.93□□□□□ -0.02
CDK5RAP3-213ENST00000579605 COL4A3Q01955 1670 aa14.93□□□□□ -0.02
CDK5RAP3-213ENST00000579605 MEIS1O00470 390 aa14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 NRP1O14786 923 aa14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 GAS2O43903 313 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 RXRAP19793 462 aa14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 PRKCQQ04759 706 aa14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 AAMPQ13685 434 aa14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 N4BP2L1Q5TBK1 243 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 B4GALNT3Q6L9W6 998 aa14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 ZNF654Q8IZM8 581 aa14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 URGCPQ8TCY9 931 aa14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 LZTS2Q9BRK4 669 aa14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 DDX23Q9BUQ8 820 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 GABBR1Q9UBS5 961 aa14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 TCEAL9Q9UHQ7 104 aa14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 CEP131Q9UPN4 1083 aa14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 PIN4Q9Y237 131 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 PRG3Q9Y2Y8 225 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 MAFBQ9Y5Q3 323 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-213ENST00000579605 C2orf16Q68DN1 1984 aa14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 POMCP01189 267 aa14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 SOD2P04179 222 aa14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 FSHRP23945 695 aa14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 TARSP26639 723 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 AFF1P51825 1210 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 PLA2G4DQ86XP0 818 aa14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 RAB11FIP4Q86YS3 637 aa14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 LINC01465Q8N7H1 131 aa14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 NELL1Q92832 810 aa14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 GCOM2Q9BZD3 368 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 OSBPL6Q9BZF3 934 aa14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 CHST12Q9NRB3 414 aa14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 SEMA4GQ9NTN9 838 aa14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 FAM105AQ9NUU6 356 aa14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 STK39Q9UEW8 545 aa14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 TAF6LQ9Y6J9 622 aa14.91□□□□□ -0.02
CDK5RAP3-213ENST00000579605 LAMA4Q16363 1823 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 DHX15O43143 795 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 SKIP12755 728 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 SMARCA1P28370 1054 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 MAGEA9P43362 315 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 GNAQP50148 359 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 NTHL1P78549 312 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 NFXL1Q6ZNB6 911 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 TPRG1Q6ZUI0 275 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 GRASPQ7Z6J2 395 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 NCOA7Q8NI08 942 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 IGDCC4Q8TDY8 1250 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 KXD1Q9BQD3 176 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 HERC2P3Q9BVR0 1158 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms