RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 IFT122Q9HBG6 1241 aa16.7■□□□□ 0.26
RN7SL560P-201ENST00000577943 BMP2KQ9NSY1 1161 aaPredicted RBP16.7■□□□□ 0.26
RN7SL560P-201ENST00000577943 FAM105AQ9NUU6 356 aa16.7■□□□□ 0.26
RN7SL560P-201ENST00000577943 USP15Q9Y4E8 981 aaPredicted RBP16.7■□□□□ 0.26
RN7SL560P-201ENST00000577943 TDRD15B5MCY1 1934 aaKnown RBP16.7■□□□□ 0.26
RN7SL560P-201ENST00000577943 MYO10Q9HD67 2058 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 NT5C1B-RDH14C9J2C7 533 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 SRGAP2CP0DJJ0 459 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 RAB27AP51159 221 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 SPIRE1Q08AE8 756 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 TRIM29Q14134 588 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 XKR9Q5GH70 373 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 SRGAP1Q7Z6B7 1085 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 TPH2Q8IWU9 490 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 SLC39A11Q8N1S5 342 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 NSUN7Q8NE18 718 aaKnown RBP16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 VN1R2Q8NFZ6 395 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 TCP11Q8WWU5 503 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 PRPF31Q8WWY3 499 aaKnown RBP16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 RSPH1Q8WYR4 309 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 TNFRSF25Q93038 417 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 LPPQ93052 612 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 ZSWIM4Q9H7M6 989 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 PCDHA12Q9UN75 941 aa16.69■□□□□ 0.26
RN7SL560P-201ENST00000577943 HIDE1A8MVS5 230 aa16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 BTBD18B2RXH4 712 aa16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 GAS2O43903 313 aaKnown RBP16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 ZC3H11AO75152 810 aaKnown RBP eCLIP16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 CA8P35219 290 aa16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 PLA2G5P39877 138 aa16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 TECP42680 631 aa16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 BCAR1P56945 870 aa16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 BMS1Q14692 1282 aaKnown RBP16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 EMC2Q15006 297 aa16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 CALCRLQ16602 461 aa16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 LLGL2Q6P1M3 1020 aa16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 GLB1LQ6UWU2 654 aa16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 RNF135Q8IUD6 432 aa16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 TMEM169Q96HH4 297 aa16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 MUTYHQ9UIF7 546 aa16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 INPP5FQ9Y2H2 1132 aa16.68■□□□□ 0.26
RN7SL560P-201ENST00000577943 ZBTB39O15060 712 aa16.67■□□□□ 0.26
RN7SL560P-201ENST00000577943 ASAP2O43150 1006 aa16.67■□□□□ 0.26
RN7SL560P-201ENST00000577943 JAK2O60674 1132 aa16.67■□□□□ 0.26
RN7SL560P-201ENST00000577943 ZNF623O75123 536 aa16.67■□□□□ 0.26
RN7SL560P-201ENST00000577943 RNASELQ05823 741 aaKnown RBP16.67■□□□□ 0.26
RN7SL560P-201ENST00000577943 LAMTOR4Q0VGL1 99 aa16.67■□□□□ 0.26
RN7SL560P-201ENST00000577943 SMC1AQ14683 1233 aaKnown RBP16.67■□□□□ 0.26
RN7SL560P-201ENST00000577943 DIS3L2Q8IYB7 885 aaKnown RBP16.67■□□□□ 0.26
RN7SL560P-201ENST00000577943 PGBD4Q96DM1 585 aa16.67■□□□□ 0.26
RN7SL560P-201ENST00000577943 MTRQ99707 1265 aa16.67■□□□□ 0.26
RN7SL560P-201ENST00000577943 EIF2AK1Q9BQI3 630 aaKnown RBP16.67■□□□□ 0.26
RN7SL560P-201ENST00000577943 PHF7Q9BWX1 381 aaPredicted RBP16.67■□□□□ 0.26
RN7SL560P-201ENST00000577943 AGPAT5Q9NUQ2 364 aa16.67■□□□□ 0.26
RN7SL560P-201ENST00000577943 TRIOO75962 3097 aa16.67■□□□□ 0.26
RN7SL560P-201ENST00000577943 TECTAO75443 2155 aa16.67■□□□□ 0.26
RN7SL560P-201ENST00000577943 CARNS1A5YM72 827 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 MEIS3P2A8K0S8 358 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 NEMFO60524 1076 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 OFD1O75665 1012 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 SLITRK3O94933 977 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 TXKP42681 527 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 KCNC3Q14003 757 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 HERC4Q5GLZ8 1057 aaPredicted RBP16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 NOMO2Q5JPE7 1267 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 ANKRD54Q6NXT1 300 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 TMEM184AQ6ZMB5 413 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 FERMT3Q86UX7 667 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 MRPL43Q8N983 215 aaKnown RBP16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 RNF149Q8NC42 400 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 CCDC43Q96MW1 224 aaKnown RBP16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 GBP3Q9H0R5 595 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 NRDE2Q9H7Z3 1164 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 TTC12Q9H892 705 aaPredicted RBP16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 MINDY3Q9H8M7 445 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 TBC1D13Q9NVG8 400 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 ARIH1Q9Y4X5 557 aaPredicted RBP16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 PCDHB2Q9Y5E7 798 aa16.66■□□□□ 0.26
RN7SL560P-201ENST00000577943 C2orf71A6NGG8 1288 aa16.65■□□□□ 0.26
RN7SL560P-201ENST00000577943 LOC730098B7Z3J9 87 aa16.65■□□□□ 0.26
RN7SL560P-201ENST00000577943 ERLIN2O94905 339 aa16.65■□□□□ 0.26
RN7SL560P-201ENST00000577943 VPS52Q8N1B4 723 aa16.65■□□□□ 0.26
RN7SL560P-201ENST00000577943 TMEM87AQ8NBN3 555 aa16.65■□□□□ 0.26
RN7SL560P-201ENST00000577943 URGCPQ8TCY9 931 aa16.65■□□□□ 0.26
RN7SL560P-201ENST00000577943 SUSD6Q92537 303 aa16.65■□□□□ 0.26
RN7SL560P-201ENST00000577943 CASP10Q92851 521 aa16.65■□□□□ 0.26
RN7SL560P-201ENST00000577943 RPGRIP1Q96KN7 1286 aa16.65■□□□□ 0.26
RN7SL560P-201ENST00000577943 APOL5Q9BWW9 433 aa16.65■□□□□ 0.26
RN7SL560P-201ENST00000577943 SEC24BO95487 1268 aa16.64■□□□□ 0.25
RN7SL560P-201ENST00000577943 CXCL14O95715 111 aa16.64■□□□□ 0.25
RN7SL560P-201ENST00000577943 ATP2B1P20020 1258 aa16.64■□□□□ 0.25
RN7SL560P-201ENST00000577943 HOXA11P31270 313 aaPredicted RBP16.64■□□□□ 0.25
RN7SL560P-201ENST00000577943 MXD4Q14582 209 aaPredicted RBP16.64■□□□□ 0.25
RN7SL560P-201ENST00000577943 CBX2Q14781 532 aaPredicted RBP16.64■□□□□ 0.25
RN7SL560P-201ENST00000577943 SYCE2Q6PIF2 218 aa16.64■□□□□ 0.25
RN7SL560P-201ENST00000577943 AGMOQ6ZNB7 445 aa16.64■□□□□ 0.25
RN7SL560P-201ENST00000577943 IGSF21Q96ID5 467 aa16.64■□□□□ 0.25
RN7SL560P-201ENST00000577943 HSD17B14Q9BPX1 270 aa16.64■□□□□ 0.25
RN7SL560P-201ENST00000577943 S1PR5Q9H228 398 aa16.64■□□□□ 0.25
RN7SL560P-201ENST00000577943 RSAD1Q9HA92 442 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms