RNA–Protein interactions for RNA: ENST00000577699.6

AP003028.1-201, humanhuman

TSL 5 BASIC

Gene AP003028.1, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003028.1-201ENST00000577699 VPS52Q8N1B4 723 aa12.68□□□□□ -0.38
AP003028.1-201ENST00000577699 ZNF274Q96GC6 653 aaPredicted RBP12.68□□□□□ -0.38
AP003028.1-201ENST00000577699 NLRP4Q96MN2 994 aa12.68□□□□□ -0.38
AP003028.1-201ENST00000577699 SH2D3AQ9BRG2 576 aa12.68□□□□□ -0.38
AP003028.1-201ENST00000577699 ZBP1Q9H171 429 aa12.68□□□□□ -0.38
AP003028.1-201ENST00000577699 FAM105AQ9NUU6 356 aa12.68□□□□□ -0.38
AP003028.1-201ENST00000577699 TBC1D13Q9NVG8 400 aa12.68□□□□□ -0.38
AP003028.1-201ENST00000577699 DZANK1Q9NVP4 752 aa12.68□□□□□ -0.38
AP003028.1-201ENST00000577699 ZFHX2Q9C0A1 2572 aaPredicted RBP12.68□□□□□ -0.38
AP003028.1-201ENST00000577699 NT5C1B-RDH14C9J2C7 533 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 SLC37A4O43826 429 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 MTHFRP42898 656 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 RNASELQ05823 741 aaKnown RBP12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 PPP2R5CQ13362 524 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 MTMR3Q13615 1198 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 GIT2Q14161 759 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 INF2Q27J81 1249 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 NOMO2Q5JPE7 1267 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 PLA2G4FQ68DD2 849 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 CATSPER4Q7RTX7 472 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 DDX53Q86TM3 631 aaKnown RBP12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 TMEM173Q86WV6 379 aaPredicted RBP12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 TMEM87AQ8NBN3 555 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 SLC7A3Q8WY07 619 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 LPPQ93052 612 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 IGSF21Q96ID5 467 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 RIPOR3Q96MK2 946 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 AIFM3Q96NN9 605 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 POMKQ9H5K3 350 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 CYP26B1Q9NR63 512 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 AGPAT5Q9NUQ2 364 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 CDH22Q9UJ99 828 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 VAV3Q9UKW4 847 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 INPP5FQ9Y2H2 1132 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 PPME1Q9Y570 386 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 IRAK3Q9Y616 596 aa12.67□□□□□ -0.38
AP003028.1-201ENST00000577699 DKC1O60832 514 aaKnown RBP eCLIP12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 ZNF623O75123 536 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 CDKL5O76039 1030 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 CXCL14O95715 111 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 CTSAP10619 480 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 GCFC2P16383 781 aaKnown RBP12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 QARSP47897 775 aaKnown RBP12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 VCPP55072 806 aaKnown RBP12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 LETM2Q2VYF4 491 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 LONRF3Q496Y0 759 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 KSR1Q8IVT5 923 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 EXOC8Q8IYI6 725 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 UBALD2Q8IYN6 164 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 KREMEN2Q8NCW0 462 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 URGCPQ8TCY9 931 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 PGBD4Q96DM1 585 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 FAM20AQ96MK3 541 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 TM6SF1Q9BZW5 370 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 IFT122Q9HBG6 1241 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 KCNMB3Q9NPA1 279 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 STK39Q9UEW8 545 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 SORCS3Q9UPU3 1222 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 COL4A3BPQ9Y5P4 624 aa12.66□□□□□ -0.38
AP003028.1-201ENST00000577699 DENND4AQ7Z401 1863 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 ARID2Q68CP9 1835 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 CCDC194A0A1B0GVG4 234 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 MEIS3P2A8K0S8 358 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 C2CD4DB7Z1M9 353 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 EML1O00423 815 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 OFD1O75665 1012 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 RFC5P40937 340 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 TCF15Q12870 199 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 STK3Q13188 491 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 RARS2Q5T160 578 aaKnown RBP12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 PPP4R3AQ6IN85 833 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 KIAA1841Q6NSI8 718 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 NEK8Q86SG6 692 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 TDRD5Q8NAT2 981 aaKnown RBP12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 BCL7CQ8WUZ0 217 aaPredicted RBP12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 PSPC1Q8WXF1 523 aaKnown RBP12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 AUTS2Q8WXX7 1259 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 PHOX2BQ99453 314 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 PHF20Q9BVI0 1012 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 SLKQ9H2G2 1235 aaPredicted RBP12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 NRDE2Q9H7Z3 1164 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 PCDHB2Q9Y5E7 798 aa12.65□□□□□ -0.38
AP003028.1-201ENST00000577699 STK36Q9NRP7 1315 aa12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 CNTNAP2Q9UHC6 1331 aa12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 TBX3O15119 743 aa12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 GAS2O43903 313 aaKnown RBP12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 P4HBP07237 508 aaKnown RBP12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 GALTP07902 379 aa12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 EPCAMP16422 314 aa12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 XBP1P17861 261 aa12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 AVPR2P30518 371 aa12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 SLC11A1P49279 550 aa12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 NUBP1P53384 320 aa12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 NPEPPSP55786 919 aa12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 PTPN14Q15678 1187 aa12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 ATAT1Q5SQI0 421 aa12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 SRGAP1Q7Z6B7 1085 aa12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 CABP7Q86V35 215 aa12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 PPFIBP1Q86W92 1011 aa12.64□□□□□ -0.39
AP003028.1-201ENST00000577699 SLC22A17Q8WUG5 538 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms