RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 HIC1Q14526 733 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 MTERF2Q49AM1 385 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 COBLL1Q53SF7 1204 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 IER5Q5VY09 327 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 MTHFD1LQ6UB35 978 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 UNC13DQ70J99 1090 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 BMP8AQ7Z5Y6 402 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 GPBP1Q86WP2 473 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 NME8Q8N427 588 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 C7orf31Q8N865 590 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 RETREG2Q8NC44 543 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 LMBR1Q8WVP7 490 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TCP11Q8WWU5 503 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 SLC7A3Q8WY07 619 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 KIFAP3Q92845 792 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 RUSC1Q9BVN2 902 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 SETD4Q9NVD3 440 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 LMCD1Q9NZU5 365 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 HDAC6Q9UBN7 1215 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 SEL1LQ9UBV2 794 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TRPC6Q9Y210 931 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PCDHA5Q9Y5H7 936 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PKD1L2Q7Z442 2459 aa12.33□□□□□ -0.44
CDK5RAP3-204ENST00000577664 RIF1Q5UIP0 2472 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 A0A0U1RQG5 324 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 C17orf102A2RUQ5 167 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ARVCFO00192 962 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 LPXNO60711 386 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 SMC2O95347 1197 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 AFMP43652 599 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TRIML1Q8N9V2 468 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 SPIRE2Q8WWL2 714 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 STAMQ92783 540 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 DRC1Q96MC2 740 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 CTAGE1Q96RT6 745 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 FIZ1Q96SL8 496 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 REEP2Q9BRK0 252 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 STRA6Q9BX79 667 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ST6GALNAC4Q9H4F1 302 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 UBE2ZQ9H832 354 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ATP6V0A4Q9HBG4 840 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 OLFML3Q9NRN5 406 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 COL4A3BPQ9Y5P4 624 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 SLC4A7Q9Y6M7 1214 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TECTAO75443 2155 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 KAT6AQ92794 2004 aa12.32□□□□□ -0.44
CDK5RAP3-204ENST00000577664 CD4P01730 458 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 RPN1P04843 607 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 CA3P07451 260 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PRR29P0C7W0 189 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 IL9P15248 144 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 GAP43P17677 238 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TMOD1P28289 359 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 DNM2P50570 870 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 POLGP54098 1239 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 RBL2Q08999 1139 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PNOCQ13519 176 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 MXD4Q14582 209 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 EMC2Q15006 297 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TPRNQ4KMQ1 711 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 EFCAB12Q6NXP0 572 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TAF2Q6P1X5 1199 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 OTOP2Q7RTS6 562 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 SERINC5Q86VE9 423 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 CCDC65Q8IXS2 484 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 GRAMD1CQ8IYS0 662 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 KIAA0319LQ8IZA0 1049 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 SH2D3AQ9BRG2 576 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 NFKBIZQ9BYH8 718 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PARVGQ9HBI0 331 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ALG13Q9NP73 1137 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PANK4Q9NVE7 773 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 RMND1Q9NWS8 449 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 LARSQ9P2J5 1176 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ARID2Q68CP9 1835 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 FAM186AA6NE01 2351 aa12.31□□□□□ -0.44
CDK5RAP3-204ENST00000577664 GRXCR2A6NFK2 248 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 C19orf67A6NJJ6 358 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PROB1E7EW31 1015 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 TREHO43280 583 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 USO1O60763 962 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 HIP1RO75146 1068 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 CAND2O75155 1236 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 SSBP05455 408 aaKnown RBP eCLIP12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PLS3P13797 630 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 ABCD1P33897 745 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 PTK7Q13308 1070 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 MORC3Q14149 939 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 DHX8Q14562 1220 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 CAMK4Q16566 473 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 KMT5BQ4FZB7 885 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 CT47A1Q5JQC4 288 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 IER5LQ5T953 404 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 GDF6Q6KF10 455 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 CAVIN1Q6NZI2 390 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 FAM43BQ6ZT52 329 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 DYMQ7RTS9 669 aa12.3□□□□□ -0.44
CDK5RAP3-204ENST00000577664 SMARCE1Q969G3 411 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms