RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 GGA2Q9UJY4 613 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 TMCO1Q9UM00 188 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 SNRPA1P09661 255 aaKnown RBP9.39□□□□□ -0.91
CDH8-203ENST00000577390 GSPT1P15170 499 aaKnown RBP9.39□□□□□ -0.91
CDH8-203ENST00000577390 NSFP46459 744 aaKnown RBP9.39□□□□□ -0.91
CDH8-203ENST00000577390 LONRF3Q496Y0 759 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 SLC39A2Q9NP94 309 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 ANAPC2Q9UJX6 822 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 KRT38O76015 456 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 PTPN1P18031 435 aaKnown RBP9.39□□□□□ -0.91
CDH8-203ENST00000577390 PLEKHA8Q96JA3 519 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 RANBP17Q9H2T7 1088 aaKnown RBP9.39□□□□□ -0.91
CDH8-203ENST00000577390 DDX28Q9NUL7 540 aaKnown RBP9.39□□□□□ -0.91
CDH8-203ENST00000577390 SLC25A13Q9UJS0 675 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 KCNH3Q9ULD8 1083 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 SNX6Q9UNH7 406 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 GTF2E2P29084 291 aaKnown RBP9.39□□□□□ -0.91
CDH8-203ENST00000577390 PWP1Q13610 501 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 THOC7Q6I9Y2 204 aaKnown RBP9.39□□□□□ -0.91
CDH8-203ENST00000577390 MLKLQ8NB16 471 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 PLEKHG4BQ96PX9 1271 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 PNKPQ96T60 521 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 ZWILCHQ9H900 591 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 ATP6V1G2O95670 118 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 RASGRF1Q13972 1273 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 TCEAL5Q5H9L2 206 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 AKAP7Q9P0M2 348 aaPredicted RBP9.39□□□□□ -0.91
CDH8-203ENST00000577390 RGS5O15539 181 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 KDM1AO60341 852 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 ENO2P09104 434 aaPredicted RBP9.39□□□□□ -0.91
CDH8-203ENST00000577390 MARK3P27448 753 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 TRIP4Q15650 581 aaPredicted RBP9.39□□□□□ -0.91
CDH8-203ENST00000577390 SLC5A9Q2M3M2 681 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 ZNF280DQ6N043 979 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 EEPD1Q7L9B9 569 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 NELFCDQ8IXH7 590 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 PTPRGP23470 1445 aa9.39□□□□□ -0.91
CDH8-203ENST00000577390 KDM6BO15054 1643 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 NCAM1P13591 858 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 EIF3BP55884 814 aaKnown RBP9.38□□□□□ -0.91
CDH8-203ENST00000577390 OSTNP61366 133 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 KRT40Q6A162 431 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 WDR93Q6P2C0 686 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 Q6ZUG5 572 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 MYCBPAPQ8TBZ2 947 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 PPP1R14BQ96C90 147 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 PER1O15534 1290 aaPredicted RBP9.38□□□□□ -0.91
CDH8-203ENST00000577390 DYNLT1P63172 113 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 TBC1D10BQ4KMP7 808 aaPredicted RBP9.38□□□□□ -0.91
CDH8-203ENST00000577390 CEP170Q5SW79 1584 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 ENGASEQ8NFI3 743 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 NACC1Q96RE7 527 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 NCKAP1LP55160 1127 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 SLC10A5Q5PT55 438 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 OLFML3Q9NRN5 406 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 PACSIN2Q9UNF0 486 aaPredicted RBP9.38□□□□□ -0.91
CDH8-203ENST00000577390 PCDHGA3Q9Y5H0 932 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 CCT8L1PA6NM43 557 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 MCF2LO15068 1137 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 TCP1P17987 556 aaKnown RBP9.38□□□□□ -0.91
CDH8-203ENST00000577390 ATP12AP54707 1039 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 ANKRD13DQ6ZTN6 518 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 GET4Q7L5D6 327 aaPredicted RBP9.38□□□□□ -0.91
CDH8-203ENST00000577390 TMEM110Q86TL2 294 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 CCDC127Q96BQ5 260 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 MDH1P40925 334 aaKnown RBP9.38□□□□□ -0.91
CDH8-203ENST00000577390 RBBP4Q09028 425 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 DENND6AQ8IWF6 608 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 SNX29Q8TEQ0 813 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 PSMC3P17980 439 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 AKAP5P24588 427 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 GUCY2DQ02846 1103 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 DPCR1Q3MIW9 517 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 WLSQ5T9L3 541 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 KDM7AQ6ZMT4 941 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 SRRM1Q8IYB3 904 aaKnown RBP9.38□□□□□ -0.91
CDH8-203ENST00000577390 C2orf69Q8N8R5 385 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 SPACA7Q96KW9 195 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 TNNQ9UQP3 1299 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 PLAAQ9Y263 795 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 THRAP3Q9Y2W1 955 aaKnown RBP9.38□□□□□ -0.91
CDH8-203ENST00000577390 PYGMP11217 842 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 ADCY7P51828 1080 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 OCA2Q04671 838 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 ERAP2Q6P179 960 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 GALNT15Q8N3T1 639 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 SLC10A4Q96EP9 437 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 PHACTR1Q9C0D0 580 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 TYW1Q9NV66 732 aaKnown RBP9.38□□□□□ -0.91
CDH8-203ENST00000577390 N6AMT1Q9Y5N5 214 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 CCDC88AQ3V6T2 1871 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 ZNF438Q7Z4V0 828 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 MPP4Q96JB8 637 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 PHACTR3Q96KR7 559 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 AMFRQ9UKV5 643 aa9.38□□□□□ -0.91
CDH8-203ENST00000577390 CHD4Q14839 1912 aa9.37□□□□□ -0.91
CDH8-203ENST00000577390 PPP2R2AP63151 447 aa9.37□□□□□ -0.91
CDH8-203ENST00000577390 TFAMQ00059 246 aaKnown RBP9.37□□□□□ -0.91
CDH8-203ENST00000577390 PARP10Q53GL7 1025 aa9.37□□□□□ -0.91
CDH8-203ENST00000577390 FAM129AQ9BZQ8 928 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms