RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 CEP350Q5VT06 3117 aa18.12■□□□□ 0.49
ERCC4-208ENST00000576348 IKBKBO14920 756 aa18.12■□□□□ 0.49
ERCC4-208ENST00000576348 FGFR1OPO95684 399 aaKnown RBP18.12■□□□□ 0.49
ERCC4-208ENST00000576348 HOXC8P31273 242 aa18.12■□□□□ 0.49
ERCC4-208ENST00000576348 NLRP11P59045 1033 aaKnown RBP18.12■□□□□ 0.49
ERCC4-208ENST00000576348 ADAM17P78536 824 aa18.12■□□□□ 0.49
ERCC4-208ENST00000576348 GTF2BQ00403 316 aa18.12■□□□□ 0.49
ERCC4-208ENST00000576348 LRRC63Q05C16 580 aa18.12■□□□□ 0.49
ERCC4-208ENST00000576348 HIC1Q14526 733 aa18.12■□□□□ 0.49
ERCC4-208ENST00000576348 SPATA1Q5VX52 437 aa18.12■□□□□ 0.49
ERCC4-208ENST00000576348 PPP4R3CPQ6ZMV5 832 aa18.12■□□□□ 0.49
ERCC4-208ENST00000576348 ZNF410Q86VK4 478 aa18.12■□□□□ 0.49
ERCC4-208ENST00000576348 GCOM2Q9BZD3 368 aaPredicted RBP18.12■□□□□ 0.49
ERCC4-208ENST00000576348 CRISPLD2Q9H0B8 497 aa18.12■□□□□ 0.49
ERCC4-208ENST00000576348 GBP3Q9H0R5 595 aa18.12■□□□□ 0.49
ERCC4-208ENST00000576348 ARHGAP28Q9P2N2 729 aa18.12■□□□□ 0.49
ERCC4-208ENST00000576348 NFE2L3Q9Y4A8 694 aa18.12■□□□□ 0.49
ERCC4-208ENST00000576348 GRIN2DO15399 1336 aa18.12■□□□□ 0.49
ERCC4-208ENST00000576348 A0A087WZ62 844 aa18.11■□□□□ 0.49
ERCC4-208ENST00000576348 INO80B-WBP1J3KQ70 363 aa18.11■□□□□ 0.49
ERCC4-208ENST00000576348 ARVCFO00192 962 aa18.11■□□□□ 0.49
ERCC4-208ENST00000576348 PDXKO00764 312 aa18.11■□□□□ 0.49
ERCC4-208ENST00000576348 CAPN2P17655 700 aa18.11■□□□□ 0.49
ERCC4-208ENST00000576348 GJA8P48165 433 aa18.11■□□□□ 0.49
ERCC4-208ENST00000576348 GPC3P51654 580 aa18.11■□□□□ 0.49
ERCC4-208ENST00000576348 TMEM62Q0P6H9 643 aa18.11■□□□□ 0.49
ERCC4-208ENST00000576348 MAPK6Q16659 721 aa18.11■□□□□ 0.49
ERCC4-208ENST00000576348 KIZQ2M2Z5 673 aa18.11■□□□□ 0.49
ERCC4-208ENST00000576348 CENPPQ6IPU0 288 aa18.11■□□□□ 0.49
ERCC4-208ENST00000576348 DHX40Q8IX18 779 aaKnown RBP18.11■□□□□ 0.49
ERCC4-208ENST00000576348 CSGALNACT2Q8N6G5 542 aa18.11■□□□□ 0.49
ERCC4-208ENST00000576348 NOC3LQ8WTT2 800 aaKnown RBP18.11■□□□□ 0.49
ERCC4-208ENST00000576348 FDXACB1Q9BRP7 624 aaPredicted RBP18.11■□□□□ 0.49
ERCC4-208ENST00000576348 INO80BQ9C086 356 aaPredicted RBP18.11■□□□□ 0.49
ERCC4-208ENST00000576348 SENP6Q9GZR1 1112 aaPredicted RBP18.11■□□□□ 0.49
ERCC4-208ENST00000576348 SEMA6BQ9H3T3 888 aa18.11■□□□□ 0.49
ERCC4-208ENST00000576348 TMEM134Q9H6X4 195 aa18.11■□□□□ 0.49
ERCC4-208ENST00000576348 TYW1Q9NV66 732 aaKnown RBP18.11■□□□□ 0.49
ERCC4-208ENST00000576348 ADGRA3Q8IWK6 1321 aa18.1■□□□□ 0.49
ERCC4-208ENST00000576348 TRIM49BA6NDI0 452 aa18.1■□□□□ 0.49
ERCC4-208ENST00000576348 HNRNPDLO14979 420 aaKnown RBP18.1■□□□□ 0.49
ERCC4-208ENST00000576348 PPP1R37O75864 691 aa18.1■□□□□ 0.49
ERCC4-208ENST00000576348 PRKCBP05771 671 aa18.1■□□□□ 0.49
ERCC4-208ENST00000576348 RPL13P26373 211 aaKnown RBP18.1■□□□□ 0.49
ERCC4-208ENST00000576348 MATR3P43243 847 aaKnown RBP eCLIP18.1■□□□□ 0.49
ERCC4-208ENST00000576348 PTENP60484 403 aa18.1■□□□□ 0.49
ERCC4-208ENST00000576348 POU5F1BQ06416 359 aa18.1■□□□□ 0.49
ERCC4-208ENST00000576348 PTK7Q13308 1070 aa18.1■□□□□ 0.49
ERCC4-208ENST00000576348 IQCB1Q15051 598 aa18.1■□□□□ 0.49
ERCC4-208ENST00000576348 CDCA2Q69YH5 1023 aaPredicted RBP18.1■□□□□ 0.49
ERCC4-208ENST00000576348 ANKRD40Q6AI12 368 aa18.1■□□□□ 0.49
ERCC4-208ENST00000576348 SERINC5Q86VE9 423 aa18.1■□□□□ 0.49
ERCC4-208ENST00000576348 MAP4K3Q8IVH8 894 aa18.1■□□□□ 0.49
ERCC4-208ENST00000576348 ANKLE1Q8NAG6 615 aa18.1■□□□□ 0.49
ERCC4-208ENST00000576348 TRMT13Q9NUP7 481 aaKnown RBP18.1■□□□□ 0.49
ERCC4-208ENST00000576348 MAGEC2Q9UBF1 373 aaPredicted RBP18.1■□□□□ 0.49
ERCC4-208ENST00000576348 TLR3O15455 904 aaKnown RBP18.09■□□□□ 0.49
ERCC4-208ENST00000576348 CDK11BP21127 795 aaKnown RBP18.09■□□□□ 0.49
ERCC4-208ENST00000576348 THPOP40225 353 aa18.09■□□□□ 0.49
ERCC4-208ENST00000576348 LIG4P49917 911 aa18.09■□□□□ 0.49
ERCC4-208ENST00000576348 PLCB2Q00722 1185 aa18.09■□□□□ 0.49
ERCC4-208ENST00000576348 NCBP1Q09161 790 aaKnown RBP18.09■□□□□ 0.49
ERCC4-208ENST00000576348 KCNA1Q09470 495 aa18.09■□□□□ 0.49
ERCC4-208ENST00000576348 TTI2Q6NXR4 508 aa18.09■□□□□ 0.49
ERCC4-208ENST00000576348 SRGAP1Q7Z6B7 1085 aa18.09■□□□□ 0.49
ERCC4-208ENST00000576348 CREBRFQ8IUR6 639 aa18.09■□□□□ 0.49
ERCC4-208ENST00000576348 FAM114A1Q8IWE2 563 aa18.09■□□□□ 0.49
ERCC4-208ENST00000576348 CCDC155Q8N6L0 562 aa18.09■□□□□ 0.49
ERCC4-208ENST00000576348 ANKRD20A12PQ8NF67 263 aa18.09■□□□□ 0.49
ERCC4-208ENST00000576348 STRA6Q9BX79 667 aa18.09■□□□□ 0.49
ERCC4-208ENST00000576348 MRPL4Q9BYD3 311 aaKnown RBP18.09■□□□□ 0.49
ERCC4-208ENST00000576348 TRPV6Q9H1D0 765 aa18.09■□□□□ 0.49
ERCC4-208ENST00000576348 KCTD10Q9H3F6 313 aa18.09■□□□□ 0.49
ERCC4-208ENST00000576348 PRMT7Q9NVM4 692 aaPredicted RBP18.09■□□□□ 0.49
ERCC4-208ENST00000576348 CGNQ9P2M7 1197 aaKnown RBP18.09■□□□□ 0.49
ERCC4-208ENST00000576348 ARID2Q68CP9 1835 aa18.09■□□□□ 0.49
ERCC4-208ENST00000576348 MROH7Q68CQ1 1323 aa18.08■□□□□ 0.49
ERCC4-208ENST00000576348 ERLIN2O94905 339 aa18.08■□□□□ 0.48
ERCC4-208ENST00000576348 CTSHP09668 335 aa18.08■□□□□ 0.48
ERCC4-208ENST00000576348 ATN1P54259 1190 aaPredicted RBP18.08■□□□□ 0.48
ERCC4-208ENST00000576348 PMS1P54277 932 aaKnown RBP18.08■□□□□ 0.48
ERCC4-208ENST00000576348 SNRPFP62306 86 aaKnown RBP18.08■□□□□ 0.48
ERCC4-208ENST00000576348 MRPS6P82932 125 aaKnown RBP18.08■□□□□ 0.48
ERCC4-208ENST00000576348 UVSSAQ2YD98 709 aa18.08■□□□□ 0.48
ERCC4-208ENST00000576348 EDRF1Q3B7T1 1238 aa18.08■□□□□ 0.48
ERCC4-208ENST00000576348 SLC43A3Q8NBI5 491 aa18.08■□□□□ 0.48
ERCC4-208ENST00000576348 SRRTQ9BXP5 876 aaKnown RBP18.08■□□□□ 0.48
ERCC4-208ENST00000576348 NFKBIZQ9BYH8 718 aa18.08■□□□□ 0.48
ERCC4-208ENST00000576348 GRPEL1Q9HAV7 217 aa18.08■□□□□ 0.48
ERCC4-208ENST00000576348 FANCLQ9NW38 375 aa18.08■□□□□ 0.48
ERCC4-208ENST00000576348 TRPV2Q9Y5S1 764 aa18.08■□□□□ 0.48
ERCC4-208ENST00000576348 CETN3O15182 167 aa18.07■□□□□ 0.48
ERCC4-208ENST00000576348 PQBP1O60828 265 aaKnown RBP18.07■□□□□ 0.48
ERCC4-208ENST00000576348 NR3C1P04150 777 aa18.07■□□□□ 0.48
ERCC4-208ENST00000576348 NR2F2P24468 414 aa18.07■□□□□ 0.48
ERCC4-208ENST00000576348 HOXD13P35453 343 aa18.07■□□□□ 0.48
ERCC4-208ENST00000576348 FKBP3Q00688 224 aaKnown RBP18.07■□□□□ 0.48
ERCC4-208ENST00000576348 MBTD1Q05BQ5 628 aa18.07■□□□□ 0.48
ERCC4-208ENST00000576348 PRPF4BQ13523 1007 aaKnown RBP18.07■□□□□ 0.48
ERCC4-208ENST00000576348 ARMCX5Q6P1M9 558 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms