RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 TSPYL2Q9H2G4 693 aaPredicted RBP14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 FAM153AQ9UHL3 310 aa14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 GOLGA8IPA6NC78 632 aa14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 GOLGA8JA6NMD2 632 aa14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 TJP3O95049 919 aa14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 IZUMO3Q5VZ72 239 aa14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 SH3RF3Q8TEJ3 882 aaPredicted RBP14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 LBHD1Q9BQE6 289 aaPredicted RBP14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 DHX36Q9H2U1 1008 aaKnown RBP14.02□□□□□ -0.16
PCDHGB3-201ENST00000576222 ABCA9Q8IUA7 1624 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 LRRC10BA6NIK2 292 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 PDE2AO00408 941 aaPredicted RBP14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 PDXKO00764 312 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 SCNN1DP51172 638 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 PPP1R2P3Q6NXS1 205 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 RFX8Q6ZV50 586 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 WDR75Q8IWA0 830 aaKnown RBP14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 MARCH10Q8NA82 808 aaPredicted RBP14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 GLG1Q92896 1179 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 FAM129AQ9BZQ8 928 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 TRABDQ9H4I3 376 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 SENP1Q9P0U3 644 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 H0YCG3 227 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 CAND2O75155 1236 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 KRT37O76014 449 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 TRIM49P0CI25 452 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 TRIM49CP0CI26 452 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 GHRP10912 638 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 NCF2P19878 526 aaPredicted RBP14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 PAX7P23759 505 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 SLC17A8Q8NDX2 589 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 MTMR8Q96EF0 704 aa14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 MOV10L1Q9BXT6 1211 aaKnown RBP14.02□□□□□ -0.17
PCDHGB3-201ENST00000576222 USP17L15C9J2P7 530 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 USP17L13C9JLJ4 530 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 USP17L11C9JVI0 530 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 USP17L18D6R9N7 530 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 USP17L22D6RA61 530 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 USP17L17D6RBQ6 530 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 USP17L19D6RCP7 530 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 USP17L20D6RJB6 530 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 SKAP2O75563 359 aaPredicted RBP14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 CPP00450 1065 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 CSF1RP07333 972 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 CTCFP49711 727 aaPredicted RBP14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 USP17L24Q0WX57 530 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 USP17L6PQ6QN14 398 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 MAP7D3Q8IWC1 876 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 PRPF38AQ8NAV1 312 aaKnown RBP14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 LRGUKQ96M69 825 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 SMYD3Q9H7B4 428 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 CCNL1Q9UK58 526 aaPredicted RBP14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 GOLGA8SH3BPF8 625 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 KCNA3P22001 575 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 TROAPQ12815 778 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 TTMPQ5BVD1 217 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 KRT80Q6KB66 452 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 YTHDF3Q7Z739 585 aaKnown RBP14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 TMEM139Q8IV31 216 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 CDAN1Q8IWY9 1227 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 TRIML2Q8N7C3 387 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 TPCN2Q8NHX9 752 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 AGPAT1Q99943 283 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 EPS15L1Q9UBC2 864 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 CD163L1Q9NR16 1453 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 MYOM1P52179 1685 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 CRCPO75575 148 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 PGM1P36871 562 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 KLHDC7AQ5VTJ3 777 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 TEKT4Q8WW24 435 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 TLR10Q9BXR5 811 aa14.01□□□□□ -0.17
PCDHGB3-201ENST00000576222 TESPA1A2RU30 521 aaPredicted RBP14□□□□□ -0.17
PCDHGB3-201ENST00000576222 FAM47DPA6NHR8 397 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 MYBL2P10244 700 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 ITIH2P19823 946 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 GARSP41250 739 aaKnown RBP14□□□□□ -0.17
PCDHGB3-201ENST00000576222 KLHL38Q2WGJ6 581 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 RINT1Q6NUQ1 792 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 ARHGAP27Q6ZUM4 889 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 CCT6BQ92526 530 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 RNF25Q96BH1 459 aaPredicted RBP14□□□□□ -0.17
PCDHGB3-201ENST00000576222 PPWD1Q96BP3 646 aaKnown RBP14□□□□□ -0.17
PCDHGB3-201ENST00000576222 C9orf72Q96LT7 481 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 STK33Q9BYT3 514 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 KBTBD4Q9NVX7 518 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 NAGPAQ9UK23 515 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 GOLGA8MH3BSY2 632 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 CCDC22O60826 627 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 MARK3P27448 753 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 PMS1P54277 932 aaKnown RBP14□□□□□ -0.17
PCDHGB3-201ENST00000576222 EPHB1P54762 984 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 KYNUQ16719 465 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 MMEL1Q495T6 779 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 CEP95Q96GE4 821 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 ADAM22Q9P0K1 906 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 UBOX5O94941 541 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 COPB2P35606 906 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 SLC12A2P55011 1212 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 EDRF1Q3B7T1 1238 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 PREPLQ4J6C6 727 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms