RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 FAM13BQ9NYF5 915 aa16.82■□□□□ 0.28
LITAF-217ENST00000575426 PCDHA7Q9UN72 937 aa16.82■□□□□ 0.28
LITAF-217ENST00000575426 PIN4Q9Y237 131 aaKnown RBP16.82■□□□□ 0.28
LITAF-217ENST00000575426 TMEM265A0A087WTH1 108 aa16.81■□□□□ 0.28
LITAF-217ENST00000575426 CCDC169A6NNP5 214 aa16.81■□□□□ 0.28
LITAF-217ENST00000575426 SKIP12755 728 aa16.81■□□□□ 0.28
LITAF-217ENST00000575426 MYOGP15173 224 aa16.81■□□□□ 0.28
LITAF-217ENST00000575426 AXLP30530 894 aa16.81■□□□□ 0.28
LITAF-217ENST00000575426 RAD51AP2Q09MP3 1159 aa16.81■□□□□ 0.28
LITAF-217ENST00000575426 DMP1Q13316 513 aaPredicted RBP16.81■□□□□ 0.28
LITAF-217ENST00000575426 DSC3Q14574 896 aa16.81■□□□□ 0.28
LITAF-217ENST00000575426 TWF2Q6IBS0 349 aaKnown RBP16.81■□□□□ 0.28
LITAF-217ENST00000575426 SV2BQ7L1I2 683 aa16.81■□□□□ 0.28
LITAF-217ENST00000575426 PDILTQ8N807 584 aa16.81■□□□□ 0.28
LITAF-217ENST00000575426 LEO1Q8WVC0 666 aaPredicted RBP16.81■□□□□ 0.28
LITAF-217ENST00000575426 MINDY3Q9H8M7 445 aa16.81■□□□□ 0.28
LITAF-217ENST00000575426 C17orf75Q9HAS0 396 aa16.81■□□□□ 0.28
LITAF-217ENST00000575426 BLOC1S4Q9NUP1 217 aa16.81■□□□□ 0.28
LITAF-217ENST00000575426 CIZ1Q9ULV3 898 aaPredicted RBP16.81■□□□□ 0.28
LITAF-217ENST00000575426 YBX2Q9Y2T7 364 aaKnown RBP16.81■□□□□ 0.28
LITAF-217ENST00000575426 FNDC1Q4ZHG4 1894 aaPredicted RBP16.81■□□□□ 0.28
LITAF-217ENST00000575426 NLRC5Q86WI3 1866 aa16.81■□□□□ 0.28
LITAF-217ENST00000575426 C9IYK1 514 aa16.8■□□□□ 0.28
LITAF-217ENST00000575426 EFNA5P52803 228 aa16.8■□□□□ 0.28
LITAF-217ENST00000575426 PEX3P56589 373 aa16.8■□□□□ 0.28
LITAF-217ENST00000575426 TMEM132AQ24JP5 1023 aa16.8■□□□□ 0.28
LITAF-217ENST00000575426 AXDND1Q5T1B0 1012 aaPredicted RBP16.8■□□□□ 0.28
LITAF-217ENST00000575426 PPP2R2DQ66LE6 453 aa16.8■□□□□ 0.28
LITAF-217ENST00000575426 ZNF576Q9H609 170 aa16.8■□□□□ 0.28
LITAF-217ENST00000575426 AGPAT5Q9NUQ2 364 aa16.8■□□□□ 0.28
LITAF-217ENST00000575426 PRMT7Q9NVM4 692 aaPredicted RBP16.8■□□□□ 0.28
LITAF-217ENST00000575426 LARSQ9P2J5 1176 aaKnown RBP16.8■□□□□ 0.28
LITAF-217ENST00000575426 FAM13AO94988 1023 aa16.79■□□□□ 0.28
LITAF-217ENST00000575426 CA3P07451 260 aa16.79■□□□□ 0.28
LITAF-217ENST00000575426 LIG1P18858 919 aa16.79■□□□□ 0.28
LITAF-217ENST00000575426 SMTNP53814 917 aa16.79■□□□□ 0.28
LITAF-217ENST00000575426 HTRA4P83105 476 aaPredicted RBP16.79■□□□□ 0.28
LITAF-217ENST00000575426 MBTD1Q05BQ5 628 aa16.79■□□□□ 0.28
LITAF-217ENST00000575426 MAPK6Q16659 721 aa16.79■□□□□ 0.28
LITAF-217ENST00000575426 ARSHQ5FYA8 562 aa16.79■□□□□ 0.28
LITAF-217ENST00000575426 SHC4Q6S5L8 630 aa16.79■□□□□ 0.28
LITAF-217ENST00000575426 DEFB123Q8N688 67 aa16.79■□□□□ 0.28
LITAF-217ENST00000575426 IQUBQ8NA54 791 aa16.79■□□□□ 0.28
LITAF-217ENST00000575426 BSNDQ8WZ55 320 aa16.79■□□□□ 0.28
LITAF-217ENST00000575426 PYM1Q9BRP8 204 aaKnown RBP16.79■□□□□ 0.28
LITAF-217ENST00000575426 LRRC27Q9C0I9 530 aa16.79■□□□□ 0.28
LITAF-217ENST00000575426 ELAC1Q9H777 363 aaKnown RBP16.79■□□□□ 0.28
LITAF-217ENST00000575426 KMT5AQ9NQR1 393 aa16.79■□□□□ 0.28
LITAF-217ENST00000575426 TMEM161AQ9NX61 479 aa16.79■□□□□ 0.28
LITAF-217ENST00000575426 ODF2LQ9ULJ1 636 aa16.79■□□□□ 0.28
LITAF-217ENST00000575426 RBM19Q9Y4C8 960 aaKnown RBP16.79■□□□□ 0.28
LITAF-217ENST00000575426 RALGAPA2Q2PPJ7 1873 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 PHLPP2Q6ZVD8 1323 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 LAMA2P24043 3122 aaKnown RBP16.78■□□□□ 0.28
LITAF-217ENST00000575426 NPHP3-ACAD11A0A0J9YXS1 232 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 A0A0U1RQF3 1178 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 SFI1A8K8P3 1242 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 K7ERI5 159 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 HOXA2O43364 376 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 TBCAO75347 108 aaKnown RBP16.78■□□□□ 0.28
LITAF-217ENST00000575426 EOMESO95936 686 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 PLS3P13797 630 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 RAB27AP51159 221 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 FAM189BP81408 668 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 CDCA2Q69YH5 1023 aaPredicted RBP16.78■□□□□ 0.28
LITAF-217ENST00000575426 ADALQ6DHV7 355 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 NOTUMQ6P988 496 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 ECHDC2Q86YB7 292 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 RNF169Q8NCN4 708 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 PRIMPOLQ96LW4 560 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 SEMA6BQ9H3T3 888 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 ZHX3Q9H4I2 956 aa16.78■□□□□ 0.28
LITAF-217ENST00000575426 H0YCG3 227 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 TSPAN1O60635 241 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 DGKIO75912 1065 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 PRKCBP05771 671 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 NPTX2P47972 431 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 AMPD3Q01432 767 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 CACNB1Q02641 598 aaPredicted RBP16.77■□□□□ 0.28
LITAF-217ENST00000575426 MAPK7Q13164 816 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 GIT2Q14161 759 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 BTG3Q14201 252 aaPredicted RBP16.77■□□□□ 0.28
LITAF-217ENST00000575426 RESP18Q5W5W9 173 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 PPP4R3CPQ6ZMV5 832 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 DAW1Q8N136 415 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 FIBCD1Q8N539 461 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 MYCT1Q8N699 235 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 LRRC15Q8TF66 581 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 DHX58Q96C10 678 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 PGBD4Q96DM1 585 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 CCDC51Q96ER9 411 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 CPB2Q96IY4 423 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 CHAMP1Q96JM3 812 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 FAM161BQ96MY7 647 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 REEP2Q9BRK0 252 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 TRAIPQ9BWF2 469 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 CUEDC2Q9H467 287 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 FAM105AQ9NUU6 356 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 CHMP5Q9NZZ3 219 aa16.77■□□□□ 0.28
LITAF-217ENST00000575426 A0A087X0B3 334 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms