RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 SLC37A4O43826 429 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 CLASP2O75122 1294 aaKnown RBP11.71□□□□□ -0.53
TVP23B-208ENST00000575261 STBD1O95210 358 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 POLGP54098 1239 aaPredicted RBP11.71□□□□□ -0.53
TVP23B-208ENST00000575261 MTMR3Q13615 1198 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 GIT2Q14161 759 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 NPY5RQ15761 445 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 INF2Q27J81 1249 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 LETM2Q2VYF4 491 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 NOMO2Q5JPE7 1267 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 IER5LQ5T953 404 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 PLA2G4FQ68DD2 849 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 ANO5Q75V66 913 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 TMEM173Q86WV6 379 aaPredicted RBP11.71□□□□□ -0.53
TVP23B-208ENST00000575261 VPS52Q8N1B4 723 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 SLC7A3Q8WY07 619 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 LPPQ93052 612 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 RIPOR3Q96MK2 946 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 POMKQ9H5K3 350 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 CYP26B1Q9NR63 512 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 AGPAT5Q9NUQ2 364 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 TBC1D13Q9NVG8 400 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 DZANK1Q9NVP4 752 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 INPP5FQ9Y2H2 1132 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 DMDP11532 3685 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 CACNA1HO95180 2353 aa11.71□□□□□ -0.54
TVP23B-208ENST00000575261 CCDC194A0A1B0GVG4 234 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 ZNF623O75123 536 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 CDKL5O76039 1030 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 CXCL14O95715 111 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 CTSAP10619 480 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 GCFC2P16383 781 aaKnown RBP11.7□□□□□ -0.54
TVP23B-208ENST00000575261 MTHFRP42898 656 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 QARSP47897 775 aaKnown RBP11.7□□□□□ -0.54
TVP23B-208ENST00000575261 RNASELQ05823 741 aaKnown RBP11.7□□□□□ -0.54
TVP23B-208ENST00000575261 STK3Q13188 491 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 PPP2R5CQ13362 524 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 LONRF3Q496Y0 759 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 KSR1Q8IVT5 923 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 EXOC8Q8IYI6 725 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 URGCPQ8TCY9 931 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 PGBD4Q96DM1 585 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 IGSF21Q96ID5 467 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 FAM20AQ96MK3 541 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 AIFM3Q96NN9 605 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 TM6SF1Q9BZW5 370 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 NRDE2Q9H7Z3 1164 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 KCNMB3Q9NPA1 279 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 STK39Q9UEW8 545 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 CDH22Q9UJ99 828 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 VAV3Q9UKW4 847 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 SORCS3Q9UPU3 1222 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 PPME1Q9Y570 386 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 COL4A3BPQ9Y5P4 624 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 IRAK3Q9Y616 596 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 DENND4AQ7Z401 1863 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 ARID2Q68CP9 1835 aa11.7□□□□□ -0.54
TVP23B-208ENST00000575261 STK36Q9NRP7 1315 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 MEIS3P2A8K0S8 358 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 C2CD4DB7Z1M9 353 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 EML1O00423 815 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 P4HBP07237 508 aaKnown RBP11.69□□□□□ -0.54
TVP23B-208ENST00000575261 GALTP07902 379 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 XBP1P17861 261 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 RFC5P40937 340 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 VCPP55072 806 aaKnown RBP11.69□□□□□ -0.54
TVP23B-208ENST00000575261 TCF15Q12870 199 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 RARS2Q5T160 578 aaKnown RBP11.69□□□□□ -0.54
TVP23B-208ENST00000575261 PPP4R3AQ6IN85 833 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 KIAA1841Q6NSI8 718 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 NEK8Q86SG6 692 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 DDX53Q86TM3 631 aaKnown RBP11.69□□□□□ -0.54
TVP23B-208ENST00000575261 UBALD2Q8IYN6 164 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 TDRD5Q8NAT2 981 aaKnown RBP11.69□□□□□ -0.54
TVP23B-208ENST00000575261 KREMEN2Q8NCW0 462 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 PSPC1Q8WXF1 523 aaKnown RBP11.69□□□□□ -0.54
TVP23B-208ENST00000575261 CEP170P1Q96L14 293 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 PHF20Q9BVI0 1012 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 GBP3Q9H0R5 595 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 SLKQ9H2G2 1235 aaPredicted RBP11.69□□□□□ -0.54
TVP23B-208ENST00000575261 IFT122Q9HBG6 1241 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 KCNJ14Q9UNX9 436 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 PCDHB2Q9Y5E7 798 aa11.69□□□□□ -0.54
TVP23B-208ENST00000575261 CNTNAP2Q9UHC6 1331 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 TBX3O15119 743 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 GAS2O43903 313 aaKnown RBP11.68□□□□□ -0.54
TVP23B-208ENST00000575261 OFD1O75665 1012 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 SLC11A1P49279 550 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 NPEPPSP55786 919 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 SRGAP1Q7Z6B7 1085 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 CABP7Q86V35 215 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 PPFIBP1Q86W92 1011 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 BCL7CQ8WUZ0 217 aaPredicted RBP11.68□□□□□ -0.54
TVP23B-208ENST00000575261 AUTS2Q8WXX7 1259 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 PHOX2BQ99453 314 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 NAP1L4Q99733 375 aaKnown RBP11.68□□□□□ -0.54
TVP23B-208ENST00000575261 LARP6Q9BRS8 491 aaKnown RBP11.68□□□□□ -0.54
TVP23B-208ENST00000575261 LXNQ9BS40 222 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 IRF2BPLQ9H1B7 796 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 DHX33Q9H6R0 707 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms