RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	MYC	P01106	439 aa	Predicted RBP	13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	PHKA2	P46019	1235 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	PTEN	P60484	403 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	ZNF200	P98182	395 aa	Predicted RBP	13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	PTK7	Q13308	1070 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	NFIL3	Q16649	462 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	EDRF1	Q3B7T1	1238 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	FAM47C	Q5HY64	1035 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	TTI2	Q6NXR4	508 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	RSPH3	Q86UC2	560 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	SERINC5	Q86VE9	423 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	MAP4K3	Q8IVH8	894 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	DHX40	Q8IX18	779 aa	Known RBP	13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	RNF149	Q8NC42	400 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	GOLGA5	Q8TBA6	731 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	TMEM174	Q8WUU8	243 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	MED15	Q96RN5	788 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	TMEM106C	Q9BVX2	250 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	MCOLN1	Q9GZU1	580 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	SEMA6B	Q9H3T3	888 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	TYW1	Q9NV66	732 aa	Known RBP	13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	TBX20	Q9UMR3	447 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	CTNND2	Q9UQB3	1225 aa		13.09	□□□□□ -0.31
PRPF8-212	ENST00000575116	GOLGA6L19	H0YKK7	550 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	CALU	O43852	315 aa	Predicted RBP	13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	FGFR1OP	O95684	399 aa	Known RBP	13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	SRGAP2C	P0DJJ0	459 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	HOXD13	P35453	343 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	CDK7	P50613	346 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	GPC3	P51654	580 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	TPM4	P67936	248 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	STRN3	Q13033	797 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	PTGIS	Q16647	500 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	ZCWPW2	Q504Y3	356 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	ANKRD40	Q6AI12	368 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	RUFY4	Q6ZNE9	571 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	SRGAP1	Q7Z6B7	1085 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	NELFCD	Q8IXH7	590 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	AOPEP	Q8N6M6	819 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	NOC3L	Q8WTT2	800 aa	Known RBP	13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	DNAJB3	Q8WWF6	145 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	ZBTB10	Q96DT7	871 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	INO80B	Q9C086	356 aa	Predicted RBP	13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	GBP3	Q9H0R5	595 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	ADGRA3	Q8IWK6	1321 aa		13.08	□□□□□ -0.32
PRPF8-212	ENST00000575116	PCNT	O95613	3336 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116		A0A087WZ62	844 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	TGFB1I1	O43294	461 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	CAND2	O75155	1236 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	GPR32	O75388	356 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	PIGR	P01833	764 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	VTN	P04004	478 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	RPL13	P26373	211 aa	Known RBP	13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	MNX1	P50219	401 aa	Predicted RBP	13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	PMS1	P54277	932 aa	Known RBP	13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	STX17	P56962	302 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	NLRP11	P59045	1033 aa	Known RBP	13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	KCNA1	Q09470	495 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	MYBPC2	Q14324	1141 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	NCAPH	Q15003	741 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	TPD52L1	Q16890	204 aa	Predicted RBP	13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	FAM187B	Q17R55	369 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	C1orf53	Q5VUE5	145 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	HS2ST1	Q7LGA3	356 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	TAS1R3	Q7RTX0	852 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	LUZP1	Q86V48	1076 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	KSR1	Q8IVT5	923 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	SYCP3	Q8IZU3	236 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	PPP1R13L	Q8WUF5	828 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	NLRP4	Q96MN2	994 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	DUSP9	Q99956	384 aa	Known RBP	13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	CCDC113	Q9H0I3	377 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	ADAMTS10	Q9H324	1103 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	FZD8	Q9H461	694 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	IFT122	Q9HBG6	1241 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	NFE2L3	Q9Y4A8	694 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	CEP350	Q5VT06	3117 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	MROH7	Q68CQ1	1323 aa		13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	TRIP12	Q14669	1992 aa	Predicted RBP	13.07	□□□□□ -0.32
PRPF8-212	ENST00000575116	TRIM49B	A6NDI0	452 aa		13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116		M0QZ92	97 aa		13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	COL6A1	P12109	1028 aa		13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	CRYBB1	P53674	252 aa	Predicted RBP	13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	FKBP3	Q00688	224 aa	Known RBP	13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	MAPK6	Q16659	721 aa		13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	SLC9A9	Q8IVB4	645 aa		13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	C12orf56	Q8IXR9	622 aa		13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	CSGALNACT2	Q8N6G5	542 aa		13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	RNF214	Q8ND24	703 aa		13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	NLRP7	Q8WX94	980 aa		13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	PRIMPOL	Q96LW4	560 aa		13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	CEP63	Q96MT8	703 aa		13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	CTAGE1	Q96RT6	745 aa		13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	KIFC3	Q9BVG8	833 aa		13.06	□□□□□ -0.32
PRPF8-212	ENST00000575116	THAP9	Q9H5L6	903 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms