RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 ZNF668Q96K58 619 aaPredicted RBP11.79□□□□□ -0.52
LITAF-216ENST00000574848 CASD1Q96PB1 797 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 EIF2AK1Q9BQI3 630 aaKnown RBP11.79□□□□□ -0.52
LITAF-216ENST00000574848 FDXACB1Q9BRP7 624 aaPredicted RBP11.79□□□□□ -0.52
LITAF-216ENST00000574848 INO80BQ9C086 356 aaPredicted RBP11.79□□□□□ -0.52
LITAF-216ENST00000574848 CWH43Q9H720 699 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 TTC12Q9H892 705 aaPredicted RBP11.79□□□□□ -0.52
LITAF-216ENST00000574848 GDPD2Q9HCC8 539 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 AAASQ9NRG9 546 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 COL4A3BPQ9Y5P4 624 aa11.79□□□□□ -0.52
LITAF-216ENST00000574848 TCHHQ07283 1943 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 LAG3P18627 525 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 FGFR4P22455 802 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 DNAJB1P25685 340 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 TRAPPC10P48553 1259 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 FOSBP53539 338 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 CYP4A11Q02928 519 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 HYAL1Q12794 435 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 CTTNQ14247 550 aaKnown RBP11.78□□□□□ -0.52
LITAF-216ENST00000574848 PUS10Q3MIT2 529 aaKnown RBP11.78□□□□□ -0.52
LITAF-216ENST00000574848 CLLU1OSQ5K130 101 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 COLGALT1Q8NBJ5 622 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.78□□□□□ -0.52
LITAF-216ENST00000574848 TCP11Q8WWU5 503 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 TMEM60Q9H2L4 133 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 GRPEL1Q9HAV7 217 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 ALG13Q9NP73 1137 aaKnown RBP11.78□□□□□ -0.52
LITAF-216ENST00000574848 XPNPEP1Q9NQW7 623 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 ANKEF1Q9NU02 776 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 AGPAT5Q9NUQ2 364 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 HCSTQ9UBK5 93 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 LZTS1Q9Y250 596 aa11.78□□□□□ -0.52
LITAF-216ENST00000574848 POTEMA6NI47 508 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 ASAP2O43150 1006 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 SKIP12755 728 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 KCNA5P22460 613 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 U2AF2P26368 475 aaKnown RBP eCLIP11.77□□□□□ -0.53
LITAF-216ENST00000574848 LTBRP36941 435 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 PHKA2P46019 1235 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 RAB27AP51159 221 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 PLCB3Q01970 1234 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 GUCY1B3Q02153 619 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 POU5F1BQ06416 359 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 PCBP1Q15365 356 aaKnown RBP eCLIP11.77□□□□□ -0.53
LITAF-216ENST00000574848 LRSAM1Q6UWE0 723 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 LRRC55Q6ZSA7 311 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 SRGAP1Q7Z6B7 1085 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 IFNLR1Q8IU57 520 aaPredicted RBP11.77□□□□□ -0.53
LITAF-216ENST00000574848 NOSTRINQ8IVI9 506 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 KSR1Q8IVT5 923 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 LEO1Q8WVC0 666 aaPredicted RBP11.77□□□□□ -0.53
LITAF-216ENST00000574848 POF1BQ8WVV4 589 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 CHAMP1Q96JM3 812 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 NLRP4Q96MN2 994 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 NECAB3Q96P71 396 aaPredicted RBP11.77□□□□□ -0.53
LITAF-216ENST00000574848 MTRQ99707 1265 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 MRPL9Q9BYD2 267 aaKnown RBP11.77□□□□□ -0.53
LITAF-216ENST00000574848 DDX19AQ9NUU7 478 aaKnown RBP11.77□□□□□ -0.53
LITAF-216ENST00000574848 TYW1Q9NV66 732 aaKnown RBP11.77□□□□□ -0.53
LITAF-216ENST00000574848 PCDHB12Q9Y5F1 795 aa11.77□□□□□ -0.53
LITAF-216ENST00000574848 MYO7AQ13402 2215 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 FSCN2O14926 492 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 ZBTB39O15060 712 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 ZNF623O75123 536 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 GADD45BO75293 160 aaPredicted RBP11.76□□□□□ -0.53
LITAF-216ENST00000574848 CSDE1O75534 798 aaKnown RBP11.76□□□□□ -0.53
LITAF-216ENST00000574848 DGAT1O75907 488 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 FGF18O76093 207 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 YEATS4O95619 227 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 OR52Z1P0C646 297 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 SPATA31C1P0DKV0 1188 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 XRCC6P12956 609 aaKnown RBP eCLIP11.76□□□□□ -0.53
LITAF-216ENST00000574848 MCM7P33993 719 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 IRS1P35568 1242 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 PPM1AP35813 382 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 TXKP42681 527 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 RARRES1P49788 294 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 LAMTOR4Q0VGL1 99 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 XKR9Q5GH70 373 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 PDE12Q6L8Q7 609 aaKnown RBP11.76□□□□□ -0.53
LITAF-216ENST00000574848 TPH2Q8IWU9 490 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 ABI1Q8IZP0 508 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 KCNG4Q8TDN1 519 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 PRPF31Q8WWY3 499 aaKnown RBP11.76□□□□□ -0.53
LITAF-216ENST00000574848 PPP2R3CQ969Q6 453 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 TMEM143Q96AN5 459 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 NFKBIZQ9BYH8 718 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 MINDY3Q9H8M7 445 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 TUFT1Q9NNX1 390 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 FAM105AQ9NUU6 356 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 TMEM63CQ9P1W3 806 aa11.76□□□□□ -0.53
LITAF-216ENST00000574848 PIN4Q9Y237 131 aaKnown RBP11.76□□□□□ -0.53
LITAF-216ENST00000574848 CARNS1A5YM72 827 aa11.75□□□□□ -0.53
LITAF-216ENST00000574848 GRXCR2A6NFK2 248 aa11.75□□□□□ -0.53
LITAF-216ENST00000574848 TBX10O75333 385 aa11.75□□□□□ -0.53
LITAF-216ENST00000574848 MUTP22033 750 aa11.75□□□□□ -0.53
LITAF-216ENST00000574848 ARL2P36404 184 aa11.75□□□□□ -0.53
LITAF-216ENST00000574848 MXD4Q14582 209 aaPredicted RBP11.75□□□□□ -0.53
LITAF-216ENST00000574848 TTC38Q5R3I4 469 aa11.75□□□□□ -0.53
LITAF-216ENST00000574848 TWF2Q6IBS0 349 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms