RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 SP100P23497 879 aaPredicted RBP13.65□□□□□ -0.22
CCDC40-210ENST00000573903 MTHFRP42898 656 aa13.65□□□□□ -0.22
CCDC40-210ENST00000573903 QARSP47897 775 aaKnown RBP13.65□□□□□ -0.22
CCDC40-210ENST00000573903 NOMO2Q5JPE7 1267 aa13.65□□□□□ -0.22
CCDC40-210ENST00000573903 B3GNT9Q6UX72 402 aa13.65□□□□□ -0.22
CCDC40-210ENST00000573903 NEK8Q86SG6 692 aa13.65□□□□□ -0.22
CCDC40-210ENST00000573903 VPS52Q8N1B4 723 aa13.65□□□□□ -0.22
CCDC40-210ENST00000573903 URGCPQ8TCY9 931 aa13.65□□□□□ -0.22
CCDC40-210ENST00000573903 RIPOR3Q96MK2 946 aa13.65□□□□□ -0.22
CCDC40-210ENST00000573903 FAM20AQ96MK3 541 aa13.65□□□□□ -0.22
CCDC40-210ENST00000573903 MBOAT7Q96N66 472 aa13.65□□□□□ -0.22
CCDC40-210ENST00000573903 CYP26B1Q9NR63 512 aa13.65□□□□□ -0.22
CCDC40-210ENST00000573903 PDRG1Q9NUG6 133 aa13.65□□□□□ -0.22
CCDC40-210ENST00000573903 DZANK1Q9NVP4 752 aa13.65□□□□□ -0.22
CCDC40-210ENST00000573903 PPME1Q9Y570 386 aa13.65□□□□□ -0.22
CCDC40-210ENST00000573903 M0R2N6 131 aa13.64□□□□□ -0.23
CCDC40-210ENST00000573903 CLASP2O75122 1294 aaKnown RBP13.64□□□□□ -0.23
CCDC40-210ENST00000573903 PPP2R5CQ13362 524 aa13.64□□□□□ -0.23
CCDC40-210ENST00000573903 LONRF3Q496Y0 759 aa13.64□□□□□ -0.23
CCDC40-210ENST00000573903 PLA2G4FQ68DD2 849 aa13.64□□□□□ -0.23
CCDC40-210ENST00000573903 ANO5Q75V66 913 aa13.64□□□□□ -0.23
CCDC40-210ENST00000573903 PSPC1Q8WXF1 523 aaKnown RBP13.64□□□□□ -0.23
CCDC40-210ENST00000573903 LPPQ93052 612 aa13.64□□□□□ -0.23
CCDC40-210ENST00000573903 CEP170P1Q96L14 293 aa13.64□□□□□ -0.23
CCDC40-210ENST00000573903 AIFM3Q96NN9 605 aa13.64□□□□□ -0.23
CCDC40-210ENST00000573903 CEP89Q96ST8 783 aa13.64□□□□□ -0.23
CCDC40-210ENST00000573903 LARP6Q9BRS8 491 aaKnown RBP13.64□□□□□ -0.23
CCDC40-210ENST00000573903 GBP3Q9H0R5 595 aa13.64□□□□□ -0.23
CCDC40-210ENST00000573903 ZBP1Q9H171 429 aa13.64□□□□□ -0.23
CCDC40-210ENST00000573903 ADAM7Q9H2U9 754 aa13.64□□□□□ -0.23
CCDC40-210ENST00000573903 TBC1D13Q9NVG8 400 aa13.64□□□□□ -0.23
CCDC40-210ENST00000573903 STK39Q9UEW8 545 aa13.64□□□□□ -0.23
CCDC40-210ENST00000573903 COL4A3BPQ9Y5P4 624 aa13.64□□□□□ -0.23
CCDC40-210ENST00000573903 KMT2EQ8IZD2 1858 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 SLC37A4O43826 429 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 GAS2O43903 313 aaKnown RBP13.63□□□□□ -0.23
CCDC40-210ENST00000573903 CCNT1O60563 726 aaKnown RBP13.63□□□□□ -0.23
CCDC40-210ENST00000573903 STBD1O95210 358 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 P4HBP07237 508 aaKnown RBP13.63□□□□□ -0.23
CCDC40-210ENST00000573903 RFC5P40937 340 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 MTMR3Q13615 1198 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 PPP4R3AQ6IN85 833 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 OTUD6AQ7L8S5 288 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 SRGAP1Q7Z6B7 1085 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 DDX53Q86TM3 631 aaKnown RBP13.63□□□□□ -0.23
CCDC40-210ENST00000573903 PPFIBP1Q86W92 1011 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 KSR1Q8IVT5 923 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 TDRD5Q8NAT2 981 aaKnown RBP13.63□□□□□ -0.23
CCDC40-210ENST00000573903 TCP11Q8WWU5 503 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 IGSF21Q96ID5 467 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 FAM193BQ96PV7 902 aaPredicted RBP13.63□□□□□ -0.23
CCDC40-210ENST00000573903 POMKQ9H5K3 350 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 AGPAT5Q9NUQ2 364 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 KCNJ14Q9UNX9 436 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 STK36Q9NRP7 1315 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 CNTNAP2Q9UHC6 1331 aa13.63□□□□□ -0.23
CCDC40-210ENST00000573903 EML1O00423 815 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 TBX3O15119 743 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 ZNF623O75123 536 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 ERLIN2O94905 339 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 BAG4O95429 457 aaKnown RBP13.62□□□□□ -0.23
CCDC40-210ENST00000573903 CTSAP10619 480 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 NPEPPSP55786 919 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 ANAPC15P60006 121 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 NPY5RQ15761 445 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 ATAT1Q5SQI0 421 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 RARS2Q5T160 578 aaKnown RBP13.62□□□□□ -0.23
CCDC40-210ENST00000573903 NCAPH2Q6IBW4 605 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 UBALD2Q8IYN6 164 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 KREMEN2Q8NCW0 462 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 PRSS33Q8NF86 280 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 WASF1Q92558 559 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 LXNQ9BS40 222 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 PHF20Q9BVI0 1012 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 EMILIN2Q9BXX0 1053 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 IRF2BPLQ9H1B7 796 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 NRDE2Q9H7Z3 1164 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 RSAD1Q9HA92 442 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 BRMS1Q9HCU9 246 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 KCNMB3Q9NPA1 279 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 KANSL3Q9P2N6 904 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 DBR1Q9UK59 544 aaKnown RBP13.62□□□□□ -0.23
CCDC40-210ENST00000573903 VAV3Q9UKW4 847 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 SORCS3Q9UPU3 1222 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 PCDHB2Q9Y5E7 798 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 IRAK3Q9Y616 596 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 ARID2Q68CP9 1835 aa13.62□□□□□ -0.23
CCDC40-210ENST00000573903 ASAP2O43150 1006 aa13.61□□□□□ -0.23
CCDC40-210ENST00000573903 OFD1O75665 1012 aa13.61□□□□□ -0.23
CCDC40-210ENST00000573903 GALTP07902 379 aa13.61□□□□□ -0.23
CCDC40-210ENST00000573903 SRGAP2CP0DJJ0 459 aa13.61□□□□□ -0.23
CCDC40-210ENST00000573903 YWHABP31946 246 aaKnown RBP13.61□□□□□ -0.23
CCDC40-210ENST00000573903 NCBP1Q09161 790 aaKnown RBP13.61□□□□□ -0.23
CCDC40-210ENST00000573903 SCRN1Q12765 414 aa13.61□□□□□ -0.23
CCDC40-210ENST00000573903 EPHA7Q15375 998 aa13.61□□□□□ -0.23
CCDC40-210ENST00000573903 KIAA1841Q6NSI8 718 aa13.61□□□□□ -0.23
CCDC40-210ENST00000573903 PIK3AP1Q6ZUJ8 805 aa13.61□□□□□ -0.23
CCDC40-210ENST00000573903 CABP7Q86V35 215 aa13.61□□□□□ -0.23
CCDC40-210ENST00000573903 TMEM173Q86WV6 379 aaPredicted RBP13.61□□□□□ -0.23
CCDC40-210ENST00000573903 C4orf19Q8IY42 314 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms