RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 DSC3Q14574 896 aa15□□□□□ -0.01
RPAIN-213ENST00000573577 RRAGBQ5VZM2 374 aa15□□□□□ -0.01
RPAIN-213ENST00000573577 SLC24A5Q71RS6 500 aa15□□□□□ -0.01
RPAIN-213ENST00000573577 KSR1Q8IVT5 923 aa15□□□□□ -0.01
RPAIN-213ENST00000573577 SYT2Q8N9I0 419 aaPredicted RBP15□□□□□ -0.01
RPAIN-213ENST00000573577 PRPF31Q8WWY3 499 aaKnown RBP15□□□□□ -0.01
RPAIN-213ENST00000573577 TIPINQ9BVW5 301 aa15□□□□□ -0.01
RPAIN-213ENST00000573577 XPNPEP1Q9NQW7 623 aa15□□□□□ -0.01
RPAIN-213ENST00000573577 FAM13BQ9NYF5 915 aa15□□□□□ -0.01
RPAIN-213ENST00000573577 MTUS1Q9ULD2 1270 aa15□□□□□ -0.01
RPAIN-213ENST00000573577 EYSQ5T1H1 3165 aa15□□□□□ -0.01
RPAIN-213ENST00000573577 ARID2Q68CP9 1835 aa14.99□□□□□ -0.01
RPAIN-213ENST00000573577 TTC3P53804 2025 aa14.99□□□□□ -0.01
RPAIN-213ENST00000573577 C9IYK1 514 aa14.99□□□□□ -0.01
RPAIN-213ENST00000573577 RFXAPO00287 272 aa14.99□□□□□ -0.01
RPAIN-213ENST00000573577 CSDE1O75534 798 aaKnown RBP14.99□□□□□ -0.01
RPAIN-213ENST00000573577 FGFR4P22455 802 aa14.99□□□□□ -0.01
RPAIN-213ENST00000573577 IGFBP4P22692 258 aa14.99□□□□□ -0.01
RPAIN-213ENST00000573577 SFPQP23246 707 aaKnown RBP eCLIP14.99□□□□□ -0.01
RPAIN-213ENST00000573577 LAMTOR4Q0VGL1 99 aa14.99□□□□□ -0.01
RPAIN-213ENST00000573577 AXDND1Q5T1B0 1012 aaPredicted RBP14.99□□□□□ -0.01
RPAIN-213ENST00000573577 FAM102BQ5T8I3 360 aa14.99□□□□□ -0.01
RPAIN-213ENST00000573577 USP49Q70CQ1 688 aa14.99□□□□□ -0.01
RPAIN-213ENST00000573577 KCNK18Q7Z418 384 aa14.99□□□□□ -0.01
RPAIN-213ENST00000573577 LARP4BQ92615 738 aaKnown RBP14.99□□□□□ -0.01
RPAIN-213ENST00000573577 RAD54LQ92698 747 aa14.99□□□□□ -0.01
RPAIN-213ENST00000573577 KIFAP3Q92845 792 aa14.99□□□□□ -0.01
RPAIN-213ENST00000573577 ZNF689Q96CS4 500 aaPredicted RBP14.99□□□□□ -0.01
RPAIN-213ENST00000573577 PYM1Q9BRP8 204 aaKnown RBP14.99□□□□□ -0.01
RPAIN-213ENST00000573577 C17orf80Q9BSJ5 609 aa14.99□□□□□ -0.01
RPAIN-213ENST00000573577 POLR3FQ9H1D9 316 aaPredicted RBP14.99□□□□□ -0.01
RPAIN-213ENST00000573577 IFT122Q9HBG6 1241 aa14.99□□□□□ -0.01
RPAIN-213ENST00000573577 LRFN2Q9ULH4 789 aa14.99□□□□□ -0.01
RPAIN-213ENST00000573577 ZSCAN20P17040 1043 aaPredicted RBP14.98□□□□□ -0.01
RPAIN-213ENST00000573577 ARL2P36404 184 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 STAT6P42226 847 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 PHKA2P46019 1235 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 SLC12A3P55017 1021 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 POU5F1BQ06416 359 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 PPP2R5AQ15172 486 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 CSPP1Q1MSJ5 1256 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 ADALQ6DHV7 355 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 RINT1Q6NUQ1 792 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 MAEAQ7L5Y9 396 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 FIBCD1Q8N539 461 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 RNF149Q8NC42 400 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 IFT74Q96LB3 600 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 DRC1Q96MC2 740 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 SAMD11Q96NU1 681 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 KCNG1Q9UIX4 513 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 PCDHB7Q9Y5E2 793 aa14.98□□□□□ -0.01
RPAIN-213ENST00000573577 TRANK1O15050 2925 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 SRGAP2CP0DJJ0 459 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 POU3F3P20264 500 aaPredicted RBP14.97□□□□□ -0.01
RPAIN-213ENST00000573577 IBSPP21815 317 aaPredicted RBP14.97□□□□□ -0.01
RPAIN-213ENST00000573577 GUCY2CP25092 1073 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 FAM189BP81408 668 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 BTG3Q14201 252 aaPredicted RBP14.97□□□□□ -0.01
RPAIN-213ENST00000573577 PCBP1Q15365 356 aaKnown RBP eCLIP14.97□□□□□ -0.01
RPAIN-213ENST00000573577 RESP18Q5W5W9 173 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 SHC4Q6S5L8 630 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 C1orf186Q6ZWK4 172 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 SV2BQ7L1I2 683 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 SRGAP1Q7Z6B7 1085 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 CMTR2Q8IYT2 770 aaKnown RBP14.97□□□□□ -0.01
RPAIN-213ENST00000573577 IQUBQ8NA54 791 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 FBXO22Q8NEZ5 403 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 GDPD5Q8WTR4 605 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 RUSC1Q9BVN2 902 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 CUEDC2Q9H467 287 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 ELAC1Q9H777 363 aaKnown RBP14.97□□□□□ -0.01
RPAIN-213ENST00000573577 C17orf75Q9HAS0 396 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 CHST12Q9NRB3 414 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 BLOC1S4Q9NUP1 217 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 TMEM161AQ9NX61 479 aa14.97□□□□□ -0.01
RPAIN-213ENST00000573577 GOLGA6L4A6NEF3 574 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 GTPBP6O43824 516 aaPredicted RBP14.96□□□□□ -0.01
RPAIN-213ENST00000573577 LPXNO60711 386 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 KRT18P05783 430 aaKnown RBP14.96□□□□□ -0.01
RPAIN-213ENST00000573577 GLRA2P23416 452 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 CMA1P23946 247 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 DHX8Q14562 1220 aaKnown RBP14.96□□□□□ -0.01
RPAIN-213ENST00000573577 MCM6Q14566 821 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 EPC2Q52LR7 807 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 CATSPER4Q7RTX7 472 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 GPBP1Q86WP2 473 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 TMEM192Q8IY95 271 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 PDILTQ8N807 584 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 ASAP3Q8TDY4 903 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 CLP1Q92989 425 aaKnown RBP14.96□□□□□ -0.01
RPAIN-213ENST00000573577 CHAMP1Q96JM3 812 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 NFKBIZQ9BYH8 718 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 PANK2Q9BZ23 570 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 GPRC5CQ9NQ84 441 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 DACT1Q9NYF0 836 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 PIN4Q9Y237 131 aaKnown RBP14.96□□□□□ -0.01
RPAIN-213ENST00000573577 RWDD3Q9Y3V2 267 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 MTCH2Q9Y6C9 303 aa14.96□□□□□ -0.01
RPAIN-213ENST00000573577 COL4A4P53420 1690 aaPredicted RBP14.96□□□□□ -0.01
RPAIN-213ENST00000573577 LRRIQ4A6NIV6 560 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms