RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 XKR3Q5GH77 459 aa16.58■□□□□ 0.24
NPLOC4-207ENST00000572346 IER5LQ5T953 404 aa16.58■□□□□ 0.24
NPLOC4-207ENST00000572346 DIS3L2Q8IYB7 885 aaKnown RBP16.58■□□□□ 0.24
NPLOC4-207ENST00000572346 MRPL43Q8N983 215 aaKnown RBP16.58■□□□□ 0.24
NPLOC4-207ENST00000572346 PRSS33Q8NF86 280 aa16.58■□□□□ 0.24
NPLOC4-207ENST00000572346 FBXO18Q8NFZ0 1043 aa16.58■□□□□ 0.24
NPLOC4-207ENST00000572346 SH2D3AQ9BRG2 576 aa16.58■□□□□ 0.24
NPLOC4-207ENST00000572346 MRPL9Q9BYD2 267 aaKnown RBP16.58■□□□□ 0.24
NPLOC4-207ENST00000572346 GCOM2Q9BZD3 368 aaPredicted RBP16.58■□□□□ 0.24
NPLOC4-207ENST00000572346 DAXXQ9UER7 740 aaPredicted RBP16.58■□□□□ 0.24
NPLOC4-207ENST00000572346 KMT2EQ8IZD2 1858 aa16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 CYP3A7-CYP3A51PA0A087WV96 503 aa16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 A0A087WZ62 844 aa16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 C2orf71A6NGG8 1288 aa16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 NT5C1B-RDH14C9J2C7 533 aa16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 M0R2N6 131 aa16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 CYP3A7P24462 503 aa16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 CDC42EP1Q00587 391 aa16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 SMC1AQ14683 1233 aaKnown RBP16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 KRT25Q7Z3Z0 450 aa16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 SUGP1Q8IWZ8 645 aaKnown RBP16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 FBXL6Q8N531 539 aa16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 CASP10Q92851 521 aa16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 FDXACB1Q9BRP7 624 aaPredicted RBP16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 CHST12Q9NRB3 414 aa16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 CDH22Q9UJ99 828 aa16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 HCFC2Q9Y5Z7 792 aa16.57■□□□□ 0.24
NPLOC4-207ENST00000572346 BTBD18B2RXH4 712 aa16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 SP100P23497 879 aaPredicted RBP16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 PHKA2P46019 1235 aa16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 ALDH7A1P49419 539 aaKnown RBP16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 DNM2P50570 870 aa16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 BCAR1P56945 870 aa16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 NONOQ15233 471 aaKnown RBP eCLIP16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 NPY5RQ15761 445 aa16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 PTPN21Q16825 1174 aa16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 MCTP1Q6DN14 999 aa16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 MOXD1Q6UVY6 613 aa16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 ETNPPLQ8TBG4 499 aa16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 OXER1Q8TDS5 423 aa16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 ASIC4Q96FT7 647 aa16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 MBOAT7Q96N66 472 aa16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 TRAIPQ9BWF2 469 aa16.56■□□□□ 0.24
NPLOC4-207ENST00000572346 MAFO75444 373 aaPredicted RBP16.55■□□□□ 0.24
NPLOC4-207ENST00000572346 SFPQP23246 707 aaKnown RBP eCLIP16.55■□□□□ 0.24
NPLOC4-207ENST00000572346 NR5A1Q13285 461 aa16.55■□□□□ 0.24
NPLOC4-207ENST00000572346 TPRNQ4KMQ1 711 aa16.55■□□□□ 0.24
NPLOC4-207ENST00000572346 TWF2Q6IBS0 349 aaKnown RBP16.55■□□□□ 0.24
NPLOC4-207ENST00000572346 PIK3AP1Q6ZUJ8 805 aa16.55■□□□□ 0.24
NPLOC4-207ENST00000572346 ZNF410Q86VK4 478 aa16.55■□□□□ 0.24
NPLOC4-207ENST00000572346 LPPQ93052 612 aa16.55■□□□□ 0.24
NPLOC4-207ENST00000572346 TMEM169Q96HH4 297 aa16.55■□□□□ 0.24
NPLOC4-207ENST00000572346 PHOX2BQ99453 314 aa16.55■□□□□ 0.24
NPLOC4-207ENST00000572346 INO80BQ9C086 356 aaPredicted RBP16.55■□□□□ 0.24
NPLOC4-207ENST00000572346 SUCLA2Q9P2R7 463 aaPredicted RBP16.55■□□□□ 0.24
NPLOC4-207ENST00000572346 MYO10Q9HD67 2058 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 VPS37CA5D8V6 355 aaPredicted RBP16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 DDX11L8A8MPP1 907 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 CLASP2O75122 1294 aaKnown RBP16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 ZC3H11AO75152 810 aaKnown RBP eCLIP16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 CA8P35219 290 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 PTPN5P54829 565 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 ITIH3Q06033 890 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 LONRF3Q496Y0 759 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 CES5AQ6NT32 575 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 ANO5Q75V66 913 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 TMEM173Q86WV6 379 aaPredicted RBP16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 RHPN2Q8IUC4 686 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 KSR1Q8IVT5 923 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 VPS52Q8N1B4 723 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 RSPH1Q8WYR4 309 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 PRRX2Q99811 253 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 ZBP1Q9H171 429 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 ADAM7Q9H2U9 754 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 FOXP1Q9H334 677 aaPredicted RBP16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 POMKQ9H5K3 350 aa16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 PIN4Q9Y237 131 aaKnown RBP16.54■□□□□ 0.24
NPLOC4-207ENST00000572346 MEIS3P2A8K0S8 358 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 SLC37A4O43826 429 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 CXCL14O95715 111 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 SKIP12755 728 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 VCPP55072 806 aaKnown RBP16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 PSMC5P62195 406 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 TCF15Q12870 199 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 BMS1Q14692 1282 aaKnown RBP16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 INF2Q27J81 1249 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 PLA2G4FQ68DD2 849 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 ZBTB33Q86T24 672 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 NLRP4Q96MN2 994 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 NECTIN4Q96NY8 510 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 NRDE2Q9H7Z3 1164 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 TSHZ2Q9NRE2 1034 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 FAM105AQ9NUU6 356 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 TBC1D13Q9NVG8 400 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 DDX25Q9UHL0 483 aaKnown RBP16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 NR2E1Q9Y466 385 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 IRAK3Q9Y616 596 aa16.53■□□□□ 0.24
NPLOC4-207ENST00000572346 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 C2CD4DB7Z1M9 353 aa16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 EML1O00423 815 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms