RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 RNF19AQ9NV58 838 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 USP20Q9Y2K6 914 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 GBF1Q92538 1859 aa9.63□□□□□ -0.87
TRAPPC1-203ENST00000571739 ADGRA3Q8IWK6 1321 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 LAMA3Q16787 3333 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 TMEM265A0A087WTH1 108 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 LINC01553A4QN01 128 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 EPOPA6NHQ4 379 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 LRRIQ4A6NIV6 560 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 INO80B-WBP1J3KQ70 363 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 RFXAPO00287 272 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 B4GALT5O43286 388 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 TSPAN1O60635 241 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 EDN1P05305 212 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 LINC00271P0C7V0 271 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 ATF7P17544 494 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 SFPQP23246 707 aaKnown RBP eCLIP9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 NAMPTP43490 491 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 PHKA2P46019 1235 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 NPTX2P47972 431 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 PEX3P56589 373 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 CACNB1Q02641 598 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 GIT2Q14161 759 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 ZNF697Q5TEC3 545 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 RRAGBQ5VZM2 374 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 CDCA2Q69YH5 1023 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 ZNF598Q86UK7 904 aaKnown RBP9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 ECHDC2Q86YB7 292 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 NPAS4Q8IUM7 802 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 LARP4BQ92615 738 aaKnown RBP9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 KIFAP3Q92845 792 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 KIFC3Q9BVG8 833 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 CCDC113Q9H0I3 377 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 ELAC1Q9H777 363 aaKnown RBP9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 CERS4Q9HA82 394 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 AGPAT5Q9NUQ2 364 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 CCDC39Q9UFE4 941 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 PCDHB7Q9Y5E2 793 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 MYH15Q9Y2K3 1946 aa9.62□□□□□ -0.87
TRAPPC1-203ENST00000571739 TCHHQ07283 1943 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 A0A1B0GUA9 196 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 MYMKA6NI61 221 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 MEIS3P2A8K0S8 358 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 ZNF623O75123 536 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 STAG3L1P0CL83 205 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 FGFR1P11362 822 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 ARF4P18085 180 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 IBSPP21815 317 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 NUCB2P80303 420 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 E2F4Q16254 413 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 FAM187BQ17R55 369 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 PPP2R2DQ66LE6 453 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 PPP4R3CPQ6ZMV5 832 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 LRRC55Q6ZSA7 311 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 TAS1R3Q7RTX0 852 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 GPBP1Q86WP2 473 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 CDR2LQ86X02 465 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 PDILTQ8N807 584 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 KCNG4Q8TDN1 519 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 LEO1Q8WVC0 666 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 CPB2Q96IY4 423 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 YME1L1Q96TA2 773 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 CDX2Q99626 313 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 REEP2Q9BRK0 252 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 C17orf75Q9HAS0 396 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 TMEM161AQ9NX61 479 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 DACT1Q9NYF0 836 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 KCND2Q9NZV8 630 aa9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 PIN4Q9Y237 131 aaKnown RBP9.61□□□□□ -0.87
TRAPPC1-203ENST00000571739 CCDC169A6NNP5 214 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 ACKR2O00590 384 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 EOMESO95936 686 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 PLS3P13797 630 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 AXLP30530 894 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 ME1P48163 572 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 AFF1P51825 1210 aaKnown RBP9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 ERVK-21P61565 698 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 KRT85P78386 507 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 ADGRE1Q14246 886 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 PPP2R5AQ15172 486 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 PCBP1Q15365 356 aaKnown RBP eCLIP9.6□□□□□ -0.871e-7■■■■□ 23.7
TRAPPC1-203ENST00000571739 LONRF3Q496Y0 759 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 CLLU1OSQ5K130 101 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 NT5DC1Q5TFE4 455 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 RESP18Q5W5W9 173 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 ADALQ6DHV7 355 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 TWF2Q6IBS0 349 aaKnown RBP9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 CCDC73Q6ZRK6 1079 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 DYMQ7RTS9 669 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 MRPL10Q7Z7H8 261 aaKnown RBP9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 SMG8Q8ND04 991 aaKnown RBP9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 RASSF8Q8NHQ8 419 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 DEPTORQ8TB45 409 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 SPIRE2Q8WWL2 714 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 STAMQ92783 540 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 LPPQ93052 612 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 DNAJC19Q96DA6 116 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 IFT74Q96LB3 600 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 SPATA32Q96LK8 384 aa9.6□□□□□ -0.87
TRAPPC1-203ENST00000571739 CASD1Q96PB1 797 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms