RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 PPME1Q9Y570 386 aa12.7□□□□□ -0.38
LITAF-206ENST00000571277 COL4A3BPQ9Y5P4 624 aa12.7□□□□□ -0.38
LITAF-206ENST00000571277 TECTAO75443 2155 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 B4GALT3O60512 393 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 SLITRK3O94933 977 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 HOXA11P31270 313 aaPredicted RBP12.69□□□□□ -0.38
LITAF-206ENST00000571277 RFC5P40937 340 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 POLGP54098 1239 aaPredicted RBP12.69□□□□□ -0.38
LITAF-206ENST00000571277 BCAR1P56945 870 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 CYP4A11Q02928 519 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 LAMTOR4Q0VGL1 99 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 CTTNQ14247 550 aaKnown RBP12.69□□□□□ -0.38
LITAF-206ENST00000571277 LONRF3Q496Y0 759 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 HERC4Q5GLZ8 1057 aaPredicted RBP12.69□□□□□ -0.38
LITAF-206ENST00000571277 TWF2Q6IBS0 349 aaKnown RBP12.69□□□□□ -0.38
LITAF-206ENST00000571277 NCAPH2Q6IBW4 605 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 CATSPER4Q7RTX7 472 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 TMEM173Q86WV6 379 aaPredicted RBP12.69□□□□□ -0.38
LITAF-206ENST00000571277 RNF135Q8IUD6 432 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 DIS3L2Q8IYB7 885 aaKnown RBP12.69□□□□□ -0.38
LITAF-206ENST00000571277 PSPC1Q8WXF1 523 aaKnown RBP12.69□□□□□ -0.38
LITAF-206ENST00000571277 RSPH1Q8WYR4 309 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 MRPL9Q9BYD2 267 aaKnown RBP12.69□□□□□ -0.38
LITAF-206ENST00000571277 S1PR5Q9H228 398 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 ZSWIM4Q9H7M6 989 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 NGRNQ9NPE2 291 aaKnown RBP12.69□□□□□ -0.38
LITAF-206ENST00000571277 XPNPEP1Q9NQW7 623 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 BMP2KQ9NSY1 1161 aaPredicted RBP12.69□□□□□ -0.38
LITAF-206ENST00000571277 AGPAT5Q9NUQ2 364 aa12.69□□□□□ -0.38
LITAF-206ENST00000571277 PUF60Q9UHX1 559 aaKnown RBP12.69□□□□□ -0.38
LITAF-206ENST00000571277 ZNF318Q5VUA4 2279 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 FSD2A1L4K1 749 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 LOC730098B7Z3J9 87 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 NT5C1B-RDH14C9J2C7 533 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 OFD1O75665 1012 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 LYPLA2O95372 231 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 PLA2G5P39877 138 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 RAB27AP51159 221 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 KRT17Q04695 432 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 CBX2Q14781 532 aaPredicted RBP12.68□□□□□ -0.38
LITAF-206ENST00000571277 EMC2Q15006 297 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 UBXN11Q5T124 520 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 SYCE2Q6PIF2 218 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 AGMOQ6ZNB7 445 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 SRGAP1Q7Z6B7 1085 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 FERMT3Q86UX7 667 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 EXOC8Q8IYI6 725 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 MRPL43Q8N983 215 aaKnown RBP12.68□□□□□ -0.38
LITAF-206ENST00000571277 BCL7CQ8WUZ0 217 aaPredicted RBP12.68□□□□□ -0.38
LITAF-206ENST00000571277 MTMR9Q96QG7 549 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 EIF2AK1Q9BQI3 630 aaKnown RBP12.68□□□□□ -0.38
LITAF-206ENST00000571277 BRMS1Q9HCU9 246 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 ENTPD7Q9NQZ7 604 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 TBC1D13Q9NVG8 400 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 MUTYHQ9UIF7 546 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 PCDHA12Q9UN75 941 aa12.68□□□□□ -0.38
LITAF-206ENST00000571277 C2orf71A6NGG8 1288 aa12.67□□□□□ -0.38
LITAF-206ENST00000571277 GAS2O43903 313 aaKnown RBP12.67□□□□□ -0.38
LITAF-206ENST00000571277 MARCH6O60337 910 aa12.67□□□□□ -0.38
LITAF-206ENST00000571277 BAG4O95429 457 aaKnown RBP12.67□□□□□ -0.38
LITAF-206ENST00000571277 SRGAP2CP0DJJ0 459 aa12.67□□□□□ -0.38
LITAF-206ENST00000571277 SKIP12755 728 aa12.67□□□□□ -0.38
LITAF-206ENST00000571277 ALDH7A1P49419 539 aaKnown RBP12.67□□□□□ -0.38
LITAF-206ENST00000571277 AFF1P51825 1210 aaKnown RBP12.67□□□□□ -0.38
LITAF-206ENST00000571277 CALCRLQ16602 461 aa12.67□□□□□ -0.38
LITAF-206ENST00000571277 XKR9Q5GH70 373 aa12.67□□□□□ -0.38
LITAF-206ENST00000571277 NOMO2Q5JPE7 1267 aa12.67□□□□□ -0.38
LITAF-206ENST00000571277 GLB1LQ6UWU2 654 aa12.67□□□□□ -0.38
LITAF-206ENST00000571277 OTUD6AQ7L8S5 288 aa12.67□□□□□ -0.38
LITAF-206ENST00000571277 TMC7Q7Z402 723 aa12.67□□□□□ -0.38
LITAF-206ENST00000571277 MRPL10Q7Z7H8 261 aaKnown RBP12.67□□□□□ -0.38
LITAF-206ENST00000571277 TPH2Q8IWU9 490 aa12.67□□□□□ -0.38
LITAF-206ENST00000571277 RNF149Q8NC42 400 aa12.67□□□□□ -0.38
LITAF-206ENST00000571277 PHF7Q9BWX1 381 aaPredicted RBP12.67□□□□□ -0.38
LITAF-206ENST00000571277 NRDE2Q9H7Z3 1164 aa12.67□□□□□ -0.38
LITAF-206ENST00000571277 TTC12Q9H892 705 aaPredicted RBP12.67□□□□□ -0.38
LITAF-206ENST00000571277 DNAJB4Q9UDY4 337 aa12.67□□□□□ -0.38
LITAF-206ENST00000571277 PCDHB2Q9Y5E7 798 aa12.67□□□□□ -0.38
LITAF-206ENST00000571277 ASAP2O43150 1006 aa12.66□□□□□ -0.38
LITAF-206ENST00000571277 NEMFO60524 1076 aa12.66□□□□□ -0.38
LITAF-206ENST00000571277 ZC3H11AO75152 810 aaKnown RBP eCLIP12.66□□□□□ -0.38
LITAF-206ENST00000571277 GALTP07902 379 aa12.66□□□□□ -0.38
LITAF-206ENST00000571277 FOSBP53539 338 aa12.66□□□□□ -0.38
LITAF-206ENST00000571277 SMC1AQ14683 1233 aaKnown RBP12.66□□□□□ -0.38
LITAF-206ENST00000571277 ANKRD54Q6NXT1 300 aa12.66□□□□□ -0.38
LITAF-206ENST00000571277 LLGL2Q6P1M3 1020 aa12.66□□□□□ -0.38
LITAF-206ENST00000571277 ZNF280BQ86YH2 543 aa12.66□□□□□ -0.38
LITAF-206ENST00000571277 IFNLR1Q8IU57 520 aaPredicted RBP12.66□□□□□ -0.38
LITAF-206ENST00000571277 TCP11Q8WWU5 503 aa12.66□□□□□ -0.38
LITAF-206ENST00000571277 IGSF21Q96ID5 467 aa12.66□□□□□ -0.38
LITAF-206ENST00000571277 VN1R3Q9BXE9 311 aa12.66□□□□□ -0.38
LITAF-206ENST00000571277 ZBP1Q9H171 429 aa12.66□□□□□ -0.38
LITAF-206ENST00000571277 TMEM60Q9H2L4 133 aa12.66□□□□□ -0.38
LITAF-206ENST00000571277 ANKEF1Q9NU02 776 aa12.66□□□□□ -0.38
LITAF-206ENST00000571277 HCN4Q9Y3Q4 1203 aa12.66□□□□□ -0.38
LITAF-206ENST00000571277 HCFC2Q9Y5Z7 792 aa12.66□□□□□ -0.38
LITAF-206ENST00000571277 POTEMA6NI47 508 aa12.65□□□□□ -0.38
LITAF-206ENST00000571277 CLASP2O75122 1294 aaKnown RBP12.65□□□□□ -0.38
LITAF-206ENST00000571277 DDHD2O94830 711 aa12.65□□□□□ -0.38
LITAF-206ENST00000571277 SPATA31C1P0DKV0 1188 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms