RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 EYA3Q99504 573 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 USP40Q9NVE5 1235 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 BAG3O95817 575 aa16.6■□□□□ 0.25
SMG6-207ENST00000570756 SOX5P35711 763 aa16.6■□□□□ 0.25
SMG6-207ENST00000570756 SF3B3Q15393 1217 aaKnown RBP16.6■□□□□ 0.25
SMG6-207ENST00000570756 RNF43Q68DV7 783 aa16.6■□□□□ 0.25
SMG6-207ENST00000570756 CYFIP1Q7L576 1253 aa16.6■□□□□ 0.25
SMG6-207ENST00000570756 LMNTD2Q8IXW0 634 aa16.6■□□□□ 0.25
SMG6-207ENST00000570756 CKAP2Q8WWK9 683 aa16.6■□□□□ 0.25
SMG6-207ENST00000570756 NAP1L4Q99733 375 aaKnown RBP16.6■□□□□ 0.25
SMG6-207ENST00000570756 CPSF2Q9P2I0 782 aaKnown RBP16.6■□□□□ 0.25
SMG6-207ENST00000570756 PRKAG3Q9UGI9 489 aa16.6■□□□□ 0.25
SMG6-207ENST00000570756 AJAP1Q9UKB5 411 aaPredicted RBP16.6■□□□□ 0.25
SMG6-207ENST00000570756 PNMA3Q9UL41 463 aa16.6■□□□□ 0.25
SMG6-207ENST00000570756 ATP5HO75947 161 aa16.6■□□□□ 0.25
SMG6-207ENST00000570756 SNUPNO95149 360 aaKnown RBP16.6■□□□□ 0.25
SMG6-207ENST00000570756 UNC5CO95185 931 aa16.6■□□□□ 0.25
SMG6-207ENST00000570756 PPP1R18Q6NYC8 613 aa16.6■□□□□ 0.25
SMG6-207ENST00000570756 NEDD1Q8NHV4 660 aa16.6■□□□□ 0.25
SMG6-207ENST00000570756 SH3RF3Q8TEJ3 882 aaPredicted RBP16.6■□□□□ 0.25
SMG6-207ENST00000570756 GRAMD1AQ96CP6 724 aa16.6■□□□□ 0.25
SMG6-207ENST00000570756 ANKRD33BA6NCL7 494 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 LINGO3P0C6S8 592 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 CTNNA2P26232 953 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 KLRK1P26718 216 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 ABL2P42684 1182 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 CCDC137Q6PK04 289 aaKnown RBP16.59■□□□□ 0.25
SMG6-207ENST00000570756 RHOT2Q8IXI1 618 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 ALG3Q92685 438 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 ART4Q93070 314 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 SLC35C1Q96A29 364 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 COA7Q96BR5 231 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 FAM167BQ9BTA0 163 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 UBA5Q9GZZ9 404 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 ETAA1Q9NY74 926 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 PASKQ96RG2 1323 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 NAV1Q8NEY1 1877 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 AKAP3O75969 853 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 PECAM1P16284 738 aaPredicted RBP16.59■□□□□ 0.25
SMG6-207ENST00000570756 PLCG2P16885 1265 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 ATP4AP20648 1035 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 PARP6Q2NL67 630 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 INTS5Q6P9B9 1019 aaKnown RBP16.59■□□□□ 0.25
SMG6-207ENST00000570756 PRELID2Q8N945 189 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 PARD3BQ8TEW8 1205 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 ZBTB10Q96DT7 871 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 STK33Q9BYT3 514 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 ETNK1Q9HBU6 452 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 TFCP2L1Q9NZI6 479 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 ZNF652Q9Y2D9 606 aa16.59■□□□□ 0.25
SMG6-207ENST00000570756 IGSF9BQ9UPX0 1349 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 POTEB3A0JP26 581 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 ANKRD62A6NC57 917 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 POTECB2RU33 542 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 NR3C1P04150 777 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 INHBEP58166 350 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 MRPS35P82673 323 aaKnown RBP16.58■□□□□ 0.25
SMG6-207ENST00000570756 CALCOCO2Q13137 446 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 ACVR2BQ13705 512 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 CMPK2Q5EBM0 449 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 SEL1L2Q5TEA6 688 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 GJB7Q6PEY0 223 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 SLC30A9Q6PML9 568 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 POTEBQ6S5H4 581 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 KCNK9Q9NPC2 374 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 TYW1Q9NV66 732 aaKnown RBP16.58■□□□□ 0.25
SMG6-207ENST00000570756 TMOD4Q9NZQ9 345 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 MTUS1Q9ULD2 1270 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 LRRC42Q9Y546 428 aa16.58■□□□□ 0.25
SMG6-207ENST00000570756 SBF2Q86WG5 1849 aa16.58■□□□□ 0.24
SMG6-207ENST00000570756 CASP5P51878 434 aa16.58■□□□□ 0.24
SMG6-207ENST00000570756 HADHBP55084 474 aaKnown RBP16.58■□□□□ 0.24
SMG6-207ENST00000570756 GSTO1P78417 241 aa16.58■□□□□ 0.24
SMG6-207ENST00000570756 LONRF1Q17RB8 773 aa16.58■□□□□ 0.24
SMG6-207ENST00000570756 C11orf63Q6NUN7 778 aa16.58■□□□□ 0.24
SMG6-207ENST00000570756 OTUD6AQ7L8S5 288 aa16.58■□□□□ 0.24
SMG6-207ENST00000570756 CCDC25Q86WR0 208 aa16.58■□□□□ 0.24
SMG6-207ENST00000570756 RNF217Q8TC41 542 aa16.58■□□□□ 0.24
SMG6-207ENST00000570756 TGS1Q96RS0 853 aaKnown RBP16.58■□□□□ 0.24
SMG6-207ENST00000570756 DHX36Q9H2U1 1008 aaKnown RBP16.58■□□□□ 0.24
SMG6-207ENST00000570756 RNPEPL1Q9HAU8 725 aa16.58■□□□□ 0.24
SMG6-207ENST00000570756 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.58■□□□□ 0.24
SMG6-207ENST00000570756 PCDHA3Q9Y5H8 950 aa16.58■□□□□ 0.24
SMG6-207ENST00000570756 PFASO15067 1338 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 LRRD1A4D1F6 860 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 TTLL1O95922 423 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 LDHBP07195 334 aaKnown RBP16.57■□□□□ 0.24
SMG6-207ENST00000570756 ALAS1P13196 640 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 TNFAIP3P21580 790 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 CALB2P22676 271 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 STX2P32856 288 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 CTCFP49711 727 aaPredicted RBP16.57■□□□□ 0.24
SMG6-207ENST00000570756 SLC12A3P55017 1021 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 UBAP2Q5T6F2 1119 aaKnown RBP16.57■□□□□ 0.24
SMG6-207ENST00000570756 VSTM1Q6UX27 236 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 ARHGEF18Q6ZSZ5 1173 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 INTS8Q75QN2 995 aaKnown RBP16.57■□□□□ 0.24
SMG6-207ENST00000570756 CCDC105Q8IYK2 499 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 ANKRD42Q8N9B4 389 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 TGFBRAP1Q8WUH2 860 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms