RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 FAM178BQ8IXR5 827 aa16.84■□□□□ 0.29
RAB40B-203ENST00000570676 TMEM143Q96AN5 459 aa16.84■□□□□ 0.29
RAB40B-203ENST00000570676 HSD17B14Q9BPX1 270 aa16.84■□□□□ 0.29
RAB40B-203ENST00000570676 EIF2AK1Q9BQI3 630 aaKnown RBP16.84■□□□□ 0.29
RAB40B-203ENST00000570676 TRAIPQ9BWF2 469 aa16.84■□□□□ 0.29
RAB40B-203ENST00000570676 TMEM60Q9H2L4 133 aa16.84■□□□□ 0.29
RAB40B-203ENST00000570676 TTC12Q9H892 705 aaPredicted RBP16.84■□□□□ 0.29
RAB40B-203ENST00000570676 CHST12Q9NRB3 414 aa16.84■□□□□ 0.29
RAB40B-203ENST00000570676 POTEMA6NI47 508 aa16.83■□□□□ 0.28
RAB40B-203ENST00000570676 GAS2O43903 313 aaKnown RBP16.83■□□□□ 0.28
RAB40B-203ENST00000570676 EOMESO95936 686 aa16.83■□□□□ 0.28
RAB40B-203ENST00000570676 ATP2B1P20020 1258 aa16.83■□□□□ 0.28
RAB40B-203ENST00000570676 CSPP1Q1MSJ5 1256 aa16.83■□□□□ 0.28
RAB40B-203ENST00000570676 PUS10Q3MIT2 529 aaKnown RBP16.83■□□□□ 0.28
RAB40B-203ENST00000570676 RILPL1Q5EBL4 403 aa16.83■□□□□ 0.28
RAB40B-203ENST00000570676 XKR9Q5GH70 373 aa16.83■□□□□ 0.28
RAB40B-203ENST00000570676 EP400NLQ6ZTU2 488 aa16.83■□□□□ 0.28
RAB40B-203ENST00000570676 THNSL1Q8IYQ7 743 aa16.83■□□□□ 0.28
RAB40B-203ENST00000570676 RNF169Q8NCN4 708 aa16.83■□□□□ 0.28
RAB40B-203ENST00000570676 HELQQ8TDG4 1101 aa16.83■□□□□ 0.28
RAB40B-203ENST00000570676 PSPC1Q8WXF1 523 aaKnown RBP16.83■□□□□ 0.28
RAB40B-203ENST00000570676 KHSRPQ92945 711 aaKnown RBP eCLIP16.83■□□□□ 0.28
RAB40B-203ENST00000570676 ZNF396Q96N95 335 aaPredicted RBP16.83■□□□□ 0.28
RAB40B-203ENST00000570676 INO80BQ9C086 356 aaPredicted RBP16.83■□□□□ 0.28
RAB40B-203ENST00000570676 MINDY3Q9H8M7 445 aa16.83■□□□□ 0.28
RAB40B-203ENST00000570676 TLR9Q9NR96 1032 aa16.83■□□□□ 0.28
RAB40B-203ENST00000570676 AGPAT5Q9NUQ2 364 aa16.83■□□□□ 0.28
RAB40B-203ENST00000570676 PCDHA12Q9UN75 941 aa16.83■□□□□ 0.28
RAB40B-203ENST00000570676 PIN4Q9Y237 131 aaKnown RBP16.83■□□□□ 0.28
RAB40B-203ENST00000570676 BDP1A6H8Y1 2624 aa16.83■□□□□ 0.28
RAB40B-203ENST00000570676 FSCN2O14926 492 aa16.82■□□□□ 0.28
RAB40B-203ENST00000570676 PBX3P40426 434 aa16.82■□□□□ 0.28
RAB40B-203ENST00000570676 TXKP42681 527 aa16.82■□□□□ 0.28
RAB40B-203ENST00000570676 PHKA2P46019 1235 aa16.82■□□□□ 0.28
RAB40B-203ENST00000570676 TRAPPC10P48553 1259 aa16.82■□□□□ 0.28
RAB40B-203ENST00000570676 TOB1P50616 345 aaPredicted RBP16.82■□□□□ 0.28
RAB40B-203ENST00000570676 PLCB3Q01970 1234 aa16.82■□□□□ 0.28
RAB40B-203ENST00000570676 DNM1Q05193 864 aaKnown RBP16.82■□□□□ 0.28
RAB40B-203ENST00000570676 LAMTOR4Q0VGL1 99 aa16.82■□□□□ 0.28
RAB40B-203ENST00000570676 ADAM15Q13444 863 aa16.82■□□□□ 0.28
RAB40B-203ENST00000570676 TWF2Q6IBS0 349 aaKnown RBP16.82■□□□□ 0.28
RAB40B-203ENST00000570676 OTUD6AQ7L8S5 288 aa16.82■□□□□ 0.28
RAB40B-203ENST00000570676 CATSPER4Q7RTX7 472 aa16.82■□□□□ 0.28
RAB40B-203ENST00000570676 TPH2Q8IWU9 490 aa16.82■□□□□ 0.28
RAB40B-203ENST00000570676 EXOC8Q8IYI6 725 aa16.82■□□□□ 0.28
RAB40B-203ENST00000570676 ABI1Q8IZP0 508 aa16.82■□□□□ 0.28
RAB40B-203ENST00000570676 PRPF31Q8WWY3 499 aaKnown RBP16.82■□□□□ 0.28
RAB40B-203ENST00000570676 MTRQ99707 1265 aa16.82■□□□□ 0.28
RAB40B-203ENST00000570676 IGFLR1Q9H665 355 aa16.82■□□□□ 0.28
RAB40B-203ENST00000570676 MEIS3P2A8K0S8 358 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 GLP2RO95838 553 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 MCM7P33993 719 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 NRIP1P48552 1158 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 RAB27AP51159 221 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 ERVFC1P60507 584 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 TTC38Q5R3I4 469 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 KCNT2Q6UVM3 1135 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 EFHBQ8N7U6 833 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 TCP11Q8WWU5 503 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 LPPQ93052 612 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 PPP2R3CQ969Q6 453 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 CHAMP1Q96JM3 812 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 MSLNLQ96KJ4 702 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 ZNF558Q96NG5 402 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 FAM105AQ9NUU6 356 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 TFIP11Q9UBB9 837 aaKnown RBP16.81■□□□□ 0.28
RAB40B-203ENST00000570676 LZTS1Q9Y250 596 aa16.81■□□□□ 0.28
RAB40B-203ENST00000570676 MBTPS2O43462 519 aa16.8■□□□□ 0.28
RAB40B-203ENST00000570676 NCLP19338 710 aaKnown RBP16.8■□□□□ 0.28
RAB40B-203ENST00000570676 NBR1Q14596 966 aa16.8■□□□□ 0.28
RAB40B-203ENST00000570676 CLUL1Q15846 466 aa16.8■□□□□ 0.28
RAB40B-203ENST00000570676 ATL3Q6DD88 541 aa16.8■□□□□ 0.28
RAB40B-203ENST00000570676 SRGAP1Q7Z6B7 1085 aa16.8■□□□□ 0.28
RAB40B-203ENST00000570676 SLC39A11Q8N1S5 342 aa16.8■□□□□ 0.28
RAB40B-203ENST00000570676 RNF149Q8NC42 400 aa16.8■□□□□ 0.28
RAB40B-203ENST00000570676 MRPS27Q92552 414 aaKnown RBP16.8■□□□□ 0.28
RAB40B-203ENST00000570676 MRPL9Q9BYD2 267 aaKnown RBP16.8■□□□□ 0.28
RAB40B-203ENST00000570676 ANKEF1Q9NU02 776 aa16.8■□□□□ 0.28
RAB40B-203ENST00000570676 CLEC1BQ9P126 229 aa16.8■□□□□ 0.28
RAB40B-203ENST00000570676 TDRD15B5MCY1 1934 aaKnown RBP16.8■□□□□ 0.28
RAB40B-203ENST00000570676 ZNF623O75123 536 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 SRGAP2CP0DJJ0 459 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 SPATA31C1P0DKV0 1188 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 HOXA11P31270 313 aaPredicted RBP16.79■□□□□ 0.28
RAB40B-203ENST00000570676 PPM1AP35813 382 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 RARRES1P49788 294 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 NDUFV1P49821 464 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 KRT85P78386 507 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 CEBPZQ03701 1054 aaKnown RBP16.79■□□□□ 0.28
RAB40B-203ENST00000570676 ZP2Q05996 745 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 ORC2Q13416 577 aaPredicted RBP16.79■□□□□ 0.28
RAB40B-203ENST00000570676 SMAD4Q13485 552 aaKnown RBP16.79■□□□□ 0.28
RAB40B-203ENST00000570676 ZNF174Q15697 407 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 SMAD2Q15796 467 aaKnown RBP16.79■□□□□ 0.28
RAB40B-203ENST00000570676 UBXN11Q5T124 520 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 RBM23Q86U06 439 aaKnown RBP16.79■□□□□ 0.28
RAB40B-203ENST00000570676 IFNLR1Q8IU57 520 aaPredicted RBP16.79■□□□□ 0.28
RAB40B-203ENST00000570676 GJD3Q8N144 294 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 VN1R2Q8NFZ6 395 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 ASAP3Q8TDY4 903 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms