RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 PLPPR4Q7Z2D5 763 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 ZNF598Q86UK7 904 aaKnown RBP7.37□□□□□ -1.23
SMG6-204ENST00000570606 PLA2G4DQ86XP0 818 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 CCDC60Q8IWA6 550 aaPredicted RBP7.37□□□□□ -1.23
SMG6-204ENST00000570606 TEX2Q8IWB9 1127 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 CKAP2LQ8IYA6 745 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 KLHL23Q8NBE8 558 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 ATP8B4Q8TF62 1192 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 POF1BQ8WVV4 589 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 NEK1Q96PY6 1258 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 PPP1R16BQ96T49 567 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 HINFPQ9BQA5 517 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 ZNF302Q9NR11 478 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 TMEM260Q9NX78 707 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 BARHL2Q9NY43 387 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 PLAGL2Q9UPG8 496 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 SQORQ9Y6N5 450 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 V9GY48 417 aaPredicted RBP7.37□□□□□ -1.23
SMG6-204ENST00000570606 CACNA1HO95180 2353 aa7.37□□□□□ -1.23
SMG6-204ENST00000570606 TBKBP1A7MCY6 615 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 MEIS1O00470 390 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 CCNE2O96020 404 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 DNAJB1P25685 340 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 KLRC1P26715 233 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 IRS1P35568 1242 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 NRIP1P48552 1158 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 METAP2P50579 478 aaKnown RBP eCLIP7.36□□□□□ -1.23
SMG6-204ENST00000570606 SETQ01105 290 aaPredicted RBP7.36□□□□□ -1.23
SMG6-204ENST00000570606 KRT32Q14532 448 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 MIS18BP1Q6P0N0 1132 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 DHX32Q7L7V1 743 aaKnown RBP7.36□□□□□ -1.23
SMG6-204ENST00000570606 NIPA1Q7RTP0 329 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 CYP2U1Q7Z449 544 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 ADGRD2Q7Z7M1 963 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 RBM23Q86U06 439 aaKnown RBP7.36□□□□□ -1.23
SMG6-204ENST00000570606 THNSL1Q8IYQ7 743 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 NME8Q8N427 588 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 EFHBQ8N7U6 833 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 SPPL3Q8TCT6 385 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 OSMRQ99650 979 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 TMX1Q9H3N1 280 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 AAASQ9NRG9 546 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 C1orf112Q9NSG2 853 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 MUTYHQ9UIF7 546 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 BRPF3Q9ULD4 1205 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 PCDHB7Q9Y5E2 793 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 PCDHB12Q9Y5F1 795 aa7.36□□□□□ -1.23
SMG6-204ENST00000570606 CCDC196A0A1B0GTZ2 297 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 FSD2A1L4K1 749 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 SOWAHDA6NJG2 315 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 FAM86B1E9PN63 330 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 IPO5O00410 1097 aaKnown RBP7.35□□□□□ -1.23
SMG6-204ENST00000570606 GPR182O15218 404 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 MGEA5O60502 916 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 PPFIA3O75145 1194 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 FAM86B2P0C5J1 330 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 SRGAP2BP0DMP2 458 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 CDC27P30260 824 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 RCAN1P53805 252 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 AKAP17AQ02040 695 aaKnown RBP7.35□□□□□ -1.23
SMG6-204ENST00000570606 NNTQ13423 1086 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 ADAM15Q13444 863 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 PFKFB3Q16875 520 aaPredicted RBP7.35□□□□□ -1.23
SMG6-204ENST00000570606 KIZQ2M2Z5 673 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 BMP2KLQ5H9B9 411 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 ZNF484Q5JVG2 852 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 ABHD15Q6UXT9 468 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 TRMT1LQ7Z2T5 733 aaKnown RBP7.35□□□□□ -1.23
SMG6-204ENST00000570606 RTN4RL1Q86UN2 441 aaPredicted RBP7.35□□□□□ -1.23
SMG6-204ENST00000570606 REXO1Q8N1G1 1221 aaKnown RBP7.35□□□□□ -1.23
SMG6-204ENST00000570606 METTL13Q8N6R0 699 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 SMRP1Q8NCR6 262 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 MICAL1Q8TDZ2 1067 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 CCDC12Q8WUD4 166 aaPredicted RBP7.35□□□□□ -1.23
SMG6-204ENST00000570606 FAM167AQ96KS9 214 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 SCLT1Q96NL6 688 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 MAP7D2Q96T17 732 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 ADAM2Q99965 735 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 ZNF577Q9BSK1 485 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 ERVK-5Q9HDB9 667 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 TLR9Q9NR96 1032 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 PGPEP1Q9NXJ5 209 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 PLA2G2EQ9NZK7 142 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 BARX2Q9UMQ3 279 aaPredicted RBP7.35□□□□□ -1.23
SMG6-204ENST00000570606 AKT3Q9Y243 479 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 NOC2LQ9Y3T9 749 aaKnown RBP7.35□□□□□ -1.23
SMG6-204ENST00000570606 SAMM50Q9Y512 469 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 PCDHGC5Q9Y5F6 944 aa7.35□□□□□ -1.23
SMG6-204ENST00000570606 WDFY4Q6ZS81 3184 aa7.34□□□□□ -1.23
SMG6-204ENST00000570606 IGLV3-22A0A075B6J6 115 aa7.34□□□□□ -1.23
SMG6-204ENST00000570606 IGKV6D-21A0A0A0MT36 114 aa7.34□□□□□ -1.23
SMG6-204ENST00000570606 ESYT2A0FGR8 921 aa7.34□□□□□ -1.23
SMG6-204ENST00000570606 CDC45O75419 566 aa7.34□□□□□ -1.23
SMG6-204ENST00000570606 C22orf31O95567 290 aa7.34□□□□□ -1.23
SMG6-204ENST00000570606 EYA4O95677 639 aa7.34□□□□□ -1.23
SMG6-204ENST00000570606 GLP2RO95838 553 aa7.34□□□□□ -1.23
SMG6-204ENST00000570606 VTNP04004 478 aa7.34□□□□□ -1.23
SMG6-204ENST00000570606 PSAPP07602 524 aa7.34□□□□□ -1.23
SMG6-204ENST00000570606 HMGB1P09429 215 aaKnown RBP7.34□□□□□ -1.23
SMG6-204ENST00000570606 FGFR1P11362 822 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms