RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 MBTD1Q05BQ5 628 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 SKIV2LQ15477 1246 aaKnown RBP14.47□□□□□ -0.09
CNOT1-220ENST00000569916 TIGD5Q53EQ6 642 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 NAALADL2Q58DX5 795 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 PADI6Q6TGC4 694 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 LRRC55Q6ZSA7 311 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 MAEAQ7L5Y9 396 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 HELQQ8TDG4 1101 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 SNX21Q969T3 373 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 NFKBIZQ9BYH8 718 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 BHMT2Q9H2M3 363 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 ALG13Q9NP73 1137 aaKnown RBP14.47□□□□□ -0.09
CNOT1-220ENST00000569916 FAM105AQ9NUU6 356 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 DDX19AQ9NUU7 478 aaKnown RBP14.47□□□□□ -0.09
CNOT1-220ENST00000569916 TYW1Q9NV66 732 aaKnown RBP14.47□□□□□ -0.09
CNOT1-220ENST00000569916 PLAGL2Q9UPG8 496 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 INO80B-WBP1J3KQ70 363 aa14.46□□□□□ -0.09
CNOT1-220ENST00000569916 TSPAN1O60635 241 aa14.46□□□□□ -0.09
CNOT1-220ENST00000569916 SKIP12755 728 aa14.46□□□□□ -0.09
CNOT1-220ENST00000569916 CYP11B2P19099 503 aa14.46□□□□□ -0.09
CNOT1-220ENST00000569916 SYT1P21579 422 aa14.46□□□□□ -0.09
CNOT1-220ENST00000569916 RAB27AP51159 221 aa14.46□□□□□ -0.09
CNOT1-220ENST00000569916 CAMK1Q14012 370 aa14.46□□□□□ -0.09
CNOT1-220ENST00000569916 PCBP1Q15365 356 aaKnown RBP eCLIP14.46□□□□□ -0.09
CNOT1-220ENST00000569916 AMHR2Q16671 573 aa14.46□□□□□ -0.09
CNOT1-220ENST00000569916 UBXN11Q5T124 520 aa14.46□□□□□ -0.09
CNOT1-220ENST00000569916 KRT79Q5XKE5 535 aa14.46□□□□□ -0.09
CNOT1-220ENST00000569916 ARL6IP4Q66PJ3 421 aaKnown RBP14.46□□□□□ -0.09
CNOT1-220ENST00000569916 ABI1Q8IZP0 508 aa14.46□□□□□ -0.09
CNOT1-220ENST00000569916 LRRC43Q8N309 656 aa14.46□□□□□ -0.09
CNOT1-220ENST00000569916 KLHL23Q8NBE8 558 aa14.46□□□□□ -0.09
CNOT1-220ENST00000569916 COLGALT1Q8NBJ5 622 aa14.46□□□□□ -0.09
CNOT1-220ENST00000569916 ATXN2LQ8WWM7 1075 aaKnown RBP14.46□□□□□ -0.09
CNOT1-220ENST00000569916 LPPQ93052 612 aa14.46□□□□□ -0.09
CNOT1-220ENST00000569916 SPTBN5Q9NRC6 3674 aaKnown RBP14.46□□□□□ -0.1
CNOT1-220ENST00000569916 MYH11P35749 1972 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 VWA3AA6NCI4 1184 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 MEIS3P2A8K0S8 358 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 E9PMD0 336 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 ZNF623O75123 536 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 ERLIN2O94905 339 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 LAG3P18627 525 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 DNAJB1P25685 340 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 AXLP30530 894 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 TFF2Q03403 129 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 RESTQ13127 1097 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 HYIQ5T013 277 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 SPOUT1Q5T280 376 aaKnown RBP14.45□□□□□ -0.1
CNOT1-220ENST00000569916 CDCA2Q69YH5 1023 aaPredicted RBP14.45□□□□□ -0.1
CNOT1-220ENST00000569916 KCNK18Q7Z418 384 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 SPPL3Q8TCT6 385 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 BSNDQ8WZ55 320 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 COL25A1Q9BXS0 654 aaPredicted RBP14.45□□□□□ -0.1
CNOT1-220ENST00000569916 NSUN3Q9H649 340 aaKnown RBP14.45□□□□□ -0.1
CNOT1-220ENST00000569916 AAASQ9NRG9 546 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 COG5Q9UP83 839 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 PCDHB2Q9Y5E7 798 aa14.45□□□□□ -0.1
CNOT1-220ENST00000569916 TDRD15B5MCY1 1934 aaKnown RBP14.45□□□□□ -0.1
CNOT1-220ENST00000569916 LRRIQ4A6NIV6 560 aa14.44□□□□□ -0.1
CNOT1-220ENST00000569916 CSPG5O95196 566 aa14.44□□□□□ -0.1
CNOT1-220ENST00000569916 EYA4O95677 639 aa14.44□□□□□ -0.1
CNOT1-220ENST00000569916 BMP15O95972 392 aa14.44□□□□□ -0.1
CNOT1-220ENST00000569916 MRPS5P82675 430 aaKnown RBP14.44□□□□□ -0.1
CNOT1-220ENST00000569916 LONRF3Q496Y0 759 aa14.44□□□□□ -0.1
CNOT1-220ENST00000569916 TCEAL5Q5H9L2 206 aa14.44□□□□□ -0.1
CNOT1-220ENST00000569916 TJAP1Q5JTD0 557 aa14.44□□□□□ -0.1
CNOT1-220ENST00000569916 POF1BQ8WVV4 589 aa14.44□□□□□ -0.1
CNOT1-220ENST00000569916 HLA-CQ95604 372 aa14.44□□□□□ -0.1
CNOT1-220ENST00000569916 CPB2Q96IY4 423 aa14.44□□□□□ -0.1
CNOT1-220ENST00000569916 PNMA5Q96PV4 448 aa14.44□□□□□ -0.1
CNOT1-220ENST00000569916 ASB2Q96Q27 587 aa14.44□□□□□ -0.1
CNOT1-220ENST00000569916 MRPL9Q9BYD2 267 aaKnown RBP14.44□□□□□ -0.1
CNOT1-220ENST00000569916 PCDHB12Q9Y5F1 795 aa14.44□□□□□ -0.1
CNOT1-220ENST00000569916 XIRP2A4UGR9 3374 aa14.44□□□□□ -0.1
CNOT1-220ENST00000569916 B4GALT5O43286 388 aa14.43□□□□□ -0.1
CNOT1-220ENST00000569916 FGF18O76093 207 aa14.43□□□□□ -0.1
CNOT1-220ENST00000569916 ARF4P18085 180 aaPredicted RBP14.43□□□□□ -0.1
CNOT1-220ENST00000569916 NAMPTP43490 491 aa14.43□□□□□ -0.1
CNOT1-220ENST00000569916 SF3A1Q15459 793 aaKnown RBP14.43□□□□□ -0.1
CNOT1-220ENST00000569916 CSPP1Q1MSJ5 1256 aa14.43□□□□□ -0.1
CNOT1-220ENST00000569916 NOTUMQ6P988 496 aa14.43□□□□□ -0.1
CNOT1-220ENST00000569916 AGMOQ6ZNB7 445 aa14.43□□□□□ -0.1
CNOT1-220ENST00000569916 MRPL10Q7Z7H8 261 aaKnown RBP14.43□□□□□ -0.1
CNOT1-220ENST00000569916 SMG8Q8ND04 991 aaKnown RBP14.43□□□□□ -0.1
CNOT1-220ENST00000569916 RSPH1Q8WYR4 309 aa14.43□□□□□ -0.1
CNOT1-220ENST00000569916 PGBD4Q96DM1 585 aa14.43□□□□□ -0.1
CNOT1-220ENST00000569916 CCDC51Q96ER9 411 aa14.43□□□□□ -0.1
CNOT1-220ENST00000569916 EIF2AQ9BY44 585 aaKnown RBP14.43□□□□□ -0.1
CNOT1-220ENST00000569916 DNM3Q9UQ16 869 aa14.43□□□□□ -0.1
CNOT1-220ENST00000569916 MTMR6Q9Y217 621 aa14.43□□□□□ -0.1
CNOT1-220ENST00000569916 TCF20Q9UGU0 1960 aaKnown RBP14.43□□□□□ -0.1
CNOT1-220ENST00000569916 MYO7AQ13402 2215 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 BRWD1Q9NSI6 2320 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 DLL1O00548 723 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 OFD1O75665 1012 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 NCLP19338 710 aaKnown RBP14.42□□□□□ -0.1
CNOT1-220ENST00000569916 IRS1P35568 1242 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 PBX3P40426 434 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 GRIN1Q05586 938 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 COL19A1Q14993 1142 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms