RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	CCR3	P51677	355 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	IGBP1	P78318	339 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	CTDSPL2	Q05D32	466 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	C19orf57	Q0VDD7	668 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	TROAP	Q12815	778 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	GNPTAB	Q3T906	1256 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	LARP1B	Q659C4	914 aa	Known RBP	7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	ADGRD1	Q6QNK2	874 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	LONP2	Q86WA8	852 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	ABI1	Q8IZP0	508 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	KBTBD3	Q8NAB2	608 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	BCL7C	Q8WUZ0	217 aa	Predicted RBP	7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	SEPT1	Q8WYJ6	367 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	SMG7	Q92540	1137 aa	Known RBP	7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	LOXL4	Q96JB6	756 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	TTC14	Q96N46	770 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	HNRNPAB	Q99729	332 aa	Known RBP	7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	NAPB	Q9H115	298 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	ARRDC1-AS1	Q9H2J1	176 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	MAN1C1	Q9NR34	630 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	ANAPC4	Q9UJX5	808 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	MRPS17	Q9Y2R5	130 aa	Known RBP	7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	DSP	P15924	2871 aa	Known RBP	7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	BAZ2A	Q9UIF9	1905 aa	Known RBP	7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	DMXL2	Q8TDJ6	3036 aa		7.18	□□□□□ -1.26
BBS4-218	ENST00000569440	CARNS1	A5YM72	827 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	FAM221B	A6H8Z2	402 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	CHURC1-FNTB	B4DL54	471 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	AXIN1	O15169	862 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	FOXP2	O15409	715 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	RFPL2	O75678	378 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	GALT	P07902	379 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	PLA2G2A	P14555	144 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	HOXA13	P31271	388 aa	Predicted RBP	7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	FNTB	P49356	437 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	SP4	Q02446	784 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	SH3PXD2A	Q5TCZ1	1133 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	TPRG1	Q6ZUI0	275 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	GET4	Q7L5D6	327 aa	Predicted RBP	7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	ZNF598	Q86UK7	904 aa	Known RBP	7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	FAM228A	Q86W67	206 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	ECHDC2	Q86YB7	292 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	SPNS2	Q8IVW8	549 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	HDAC7	Q8WUI4	952 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	NT5C3A	Q9H0P0	336 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	SMARCAD1	Q9H4L7	1026 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	JMJD4	Q9H9V9	463 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	RTEL1	Q9NZ71	1219 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	DPP7	Q9UHL4	492 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	CDH7	Q9ULB5	785 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	MYH8	P13535	1937 aa		7.17	□□□□□ -1.26
BBS4-218	ENST00000569440	COL4A3	Q01955	1670 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	DENND4A	Q7Z401	1863 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	TK2	O00142	265 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	EPN2	O95208	641 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	PAPSS2	O95340	614 aa	Predicted RBP	7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	C1R	P00736	705 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	ZFY	P08048	801 aa	Predicted RBP	7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	CSRP1	P21291	193 aa	Known RBP	7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	RAP1GAP	P47736	663 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	CXCL12	P48061	93 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	CRYBB1	P53674	252 aa	Predicted RBP	7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	SATB1	Q01826	763 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	PLCB4	Q15147	1175 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	RNF43	Q68DV7	783 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	MTHFD1L	Q6UB35	978 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	MTSS1L	Q765P7	747 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	KIAA0319L	Q8IZA0	1049 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	FAM9B	Q8IZU0	186 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	GIMAP8	Q8ND71	665 aa	Predicted RBP	7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	TRAPPC12	Q8WVT3	735 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	PCYT2	Q99447	389 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	AMN	Q9BXJ7	453 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	MRPL9	Q9BYD2	267 aa	Known RBP	7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	PRKD2	Q9BZL6	878 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	STK39	Q9UEW8	545 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	KLK13	Q9UKR3	277 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	GINS2	Q9Y248	185 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	VPS9D1	Q9Y2B5	631 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	FRMPD4	Q14CM0	1322 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	NAV2	Q8IVL1	2488 aa		7.16	□□□□□ -1.26
BBS4-218	ENST00000569440	IGSF10	Q6WRI0	2623 aa		7.15	□□□□□ -1.26
BBS4-218	ENST00000569440		A0A0U1RQF3	1178 aa		7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	GCOM1	H8Y6P7	765 aa	Predicted RBP	7.15	□□□□□ -1.26
BBS4-218	ENST00000569440		K7ESF4	209 aa		7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	HYAL3	O43820	417 aa	Predicted RBP	7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	PPP1R11	O60927	126 aa	Predicted RBP	7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	ATP9A	O75110	1047 aa		7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	GPR32	O75388	356 aa		7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	C1QL1	O75973	258 aa		7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	POLR2M	P0CAP2	368 aa		7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	KCNA2	P16389	499 aa		7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	FSHR	P23945	695 aa		7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	HOXA6	P31267	233 aa		7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	GAS6	Q14393	721 aa		7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	PROX2	Q3B8N5	592 aa		7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	ELMSAN1	Q6PJG2	1045 aa		7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	HELQ	Q8TDG4	1101 aa		7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	RSPH1	Q8WYR4	309 aa		7.15	□□□□□ -1.26
BBS4-218	ENST00000569440	FRAT1	Q92837	279 aa	Predicted RBP	7.15	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms