RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 TRIM9Q9C026 710 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 AGO3Q9H9G7 860 aaKnown RBP10.06□□□□□ -0.8
CHD9-219ENST00000569225 ERVK-5Q9HDB9 667 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 PRMT7Q9NVM4 692 aaPredicted RBP10.06□□□□□ -0.8
CHD9-219ENST00000569225 RNF216Q9NWF9 866 aaPredicted RBP10.06□□□□□ -0.8
CHD9-219ENST00000569225 ST3GAL5Q9UNP4 418 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 ALPK3Q96L96 1907 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 SFI1A8K8P3 1242 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 GADD45BO75293 160 aaPredicted RBP10.06□□□□□ -0.8
CHD9-219ENST00000569225 ZSCAN20P17040 1043 aaPredicted RBP10.06□□□□□ -0.8
CHD9-219ENST00000569225 AFMP43652 599 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 KCNJ6P48051 423 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 MBTD1Q05BQ5 628 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 MAPK6Q16659 721 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 TMEM240Q5SV17 173 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 PDE4DIPQ5VU43 2346 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 FAM228AQ86W67 206 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 FAM178BQ8IXR5 827 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 STAMQ92783 540 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 CCDC47Q96A33 483 aaKnown RBP10.06□□□□□ -0.8
CHD9-219ENST00000569225 PRIMPOLQ96LW4 560 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 TIGD1Q96MW7 591 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 NTPCRQ9BSD7 190 aaKnown RBP10.06□□□□□ -0.8
CHD9-219ENST00000569225 POLD4Q9HCU8 107 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 CHST12Q9NRB3 414 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 PANK4Q9NVE7 773 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 KAT6AQ92794 2004 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 PVALEFA0A1B0GWK0 134 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 DENND3A2RUS2 1198 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 ZBBXA8MT70 800 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 K7ERI5 159 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 GTPBP6O43824 516 aaPredicted RBP10.05□□□□□ -0.8
CHD9-219ENST00000569225 TRAK2O60296 914 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 MAPTP10636 758 aaKnown RBP10.05□□□□□ -0.8
CHD9-219ENST00000569225 EPHB4P54760 987 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 STRN3Q13033 797 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 TMEM132AQ24JP5 1023 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 HERC4Q5GLZ8 1057 aaPredicted RBP10.05□□□□□ -0.8
CHD9-219ENST00000569225 CHRDL2Q6WN34 429 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 STXBP4Q6ZWJ1 553 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 C16orf59Q7L2K0 433 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 OTOP2Q7RTS6 562 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 ENGASEQ8NFI3 743 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 HERVK_113Q902F9 699 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 DNAJC19Q96DA6 116 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 CCDC51Q96ER9 411 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 RNPC3Q96LT9 517 aaKnown RBP10.05□□□□□ -0.8
CHD9-219ENST00000569225 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.05□□□□□ -0.83e-6■■■■□ 19.8
CHD9-219ENST00000569225 DACT1Q9NYF0 836 aa10.05□□□□□ -0.8
CHD9-219ENST00000569225 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.04□□□□□ -0.8
CHD9-219ENST00000569225 FRMD3A2A2Y4 597 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 K7ENM7 598 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 SLC16A4O15374 487 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 CSDE1O75534 798 aaKnown RBP10.04□□□□□ -0.8
CHD9-219ENST00000569225 AMHP03971 560 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 AXLP30530 894 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 SNW1Q13573 536 aaKnown RBP10.04□□□□□ -0.8
CHD9-219ENST00000569225 ALCAMQ13740 583 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 FAM187BQ17R55 369 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 PPP4R3CPQ6ZMV5 832 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 UNC13DQ70J99 1090 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 APBB1IPQ7Z5R6 666 aaPredicted RBP10.04□□□□□ -0.8
CHD9-219ENST00000569225 VWCEQ96DN2 955 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 KIFC3Q9BVG8 833 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 TMEM134Q9H6X4 195 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 MINDY3Q9H8M7 445 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 MRPL44Q9H9J2 332 aaKnown RBP10.04□□□□□ -0.8
CHD9-219ENST00000569225 OLFML3Q9NRN5 406 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 C1orf112Q9NSG2 853 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 AGPAT5Q9NUQ2 364 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 PCDH10Q9P2E7 1040 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 ARHGAP28Q9P2N2 729 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 PIN4Q9Y237 131 aaKnown RBP10.04□□□□□ -0.8
CHD9-219ENST00000569225 SLC4A7Q9Y6M7 1214 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 A0A1W2PPC1 479 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 ACKR2O00590 384 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 NR1I2O75469 434 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 SMC2O95347 1197 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 PRKCBP05771 671 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 LIG1P18858 919 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 FGFR4P22455 802 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 NCKAP1LP55160 1127 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 PRPF4BQ13523 1007 aaKnown RBP10.04□□□□□ -0.8
CHD9-219ENST00000569225 CUL4BQ13620 913 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 POSTNQ15063 836 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 NOTUMQ6P988 496 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 HAUS6Q7Z4H7 955 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 SFR1Q86XK3 245 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 ELOA2Q8IYF1 753 aaPredicted RBP10.04□□□□□ -0.8
CHD9-219ENST00000569225 GRAMD1CQ8IYS0 662 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 TDHQ8IZJ6 230 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 TMEM161BQ8NDZ6 487 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 OSBPL7Q9BZF2 842 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 CCDC113Q9H0I3 377 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 TSPYL2Q9H2G4 693 aaPredicted RBP10.04□□□□□ -0.8
CHD9-219ENST00000569225 BLZF1Q9H2G9 400 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 FZD8Q9H461 694 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 EXOC1Q9NV70 894 aa10.04□□□□□ -0.8
CHD9-219ENST00000569225 LOXHD1Q8IVV2 1947 aa10.03□□□□□ -0.8
CHD9-219ENST00000569225 ARID2Q68CP9 1835 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms