RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 PRKCEQ02156 737 aa14.06□□□□□ -0.16
SNX29-207ENST00000568949 NECTIN1Q15223 517 aa14.06□□□□□ -0.16
SNX29-207ENST00000568949 PRR16Q569H4 304 aa14.06□□□□□ -0.16
SNX29-207ENST00000568949 CREB3L3Q68CJ9 461 aa14.06□□□□□ -0.16
SNX29-207ENST00000568949 TWF2Q6IBS0 349 aaKnown RBP14.06□□□□□ -0.16
SNX29-207ENST00000568949 ZC3H14Q6PJT7 736 aaKnown RBP14.06□□□□□ -0.16
SNX29-207ENST00000568949 STAMQ92783 540 aa14.06□□□□□ -0.16
SNX29-207ENST00000568949 LPPQ93052 612 aa14.06□□□□□ -0.16
SNX29-207ENST00000568949 INO80BQ9C086 356 aaPredicted RBP14.06□□□□□ -0.16
SNX29-207ENST00000568949 WDR6Q9NNW5 1121 aaKnown RBP14.06□□□□□ -0.16
SNX29-207ENST00000568949 DISC1Q9NRI5 854 aa14.06□□□□□ -0.16
SNX29-207ENST00000568949 FAM105AQ9NUU6 356 aa14.06□□□□□ -0.16
SNX29-207ENST00000568949 EPS15L1Q9UBC2 864 aa14.06□□□□□ -0.16
SNX29-207ENST00000568949 DNAJB4Q9UDY4 337 aa14.06□□□□□ -0.16
SNX29-207ENST00000568949 DOCK8Q8NF50 2099 aa14.06□□□□□ -0.16
SNX29-207ENST00000568949 N4BP1O75113 896 aaKnown RBP14.05□□□□□ -0.16
SNX29-207ENST00000568949 CSDE1O75534 798 aaKnown RBP14.05□□□□□ -0.16
SNX29-207ENST00000568949 CFHP08603 1231 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 SRFP11831 508 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 RFX1P22670 979 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 SFNP31947 248 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 PFKFB3Q16875 520 aaPredicted RBP14.05□□□□□ -0.16
SNX29-207ENST00000568949 PHLDB3Q6NSJ2 640 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 ELMSAN1Q6PJG2 1045 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 ZNF410Q86VK4 478 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 KIAA2013Q8IYS2 634 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 SLC44A3Q8N4M1 653 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 PGBD4Q96DM1 585 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 TMEM175Q9BSA9 504 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 NIFKQ9BYG3 293 aaKnown RBP14.05□□□□□ -0.16
SNX29-207ENST00000568949 ZMYND12Q9H0C1 365 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 TBC1D17Q9HA65 648 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 MRPL17Q9NRX2 175 aaKnown RBP14.05□□□□□ -0.16
SNX29-207ENST00000568949 DPP7Q9UHL4 492 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 BRPF3Q9ULD4 1205 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 INPP5FQ9Y2H2 1132 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 R4GN57 208 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 CACNA1IQ9P0X4 2223 aa14.05□□□□□ -0.16
SNX29-207ENST00000568949 A0A087WZ62 844 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 MEIS3P2A8K0S8 358 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 ALDH2P05091 517 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 GBP2P32456 591 aaPredicted RBP14.04□□□□□ -0.16
SNX29-207ENST00000568949 DNM2P50570 870 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 JAK3P52333 1124 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 RCAN1P53805 252 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 DRP2Q13474 957 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 UGCGQ16739 394 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 LONRF3Q496Y0 759 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 ZNF280BQ86YH2 543 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 REXO1Q8N1G1 1221 aaKnown RBP14.04□□□□□ -0.16
SNX29-207ENST00000568949 URGCPQ8TCY9 931 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 CCDC12Q8WUD4 166 aaPredicted RBP14.04□□□□□ -0.16
SNX29-207ENST00000568949 RUBCNQ92622 972 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 LENG9Q96B70 501 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 RIT2Q99578 217 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 FDXACB1Q9BRP7 624 aaPredicted RBP14.04□□□□□ -0.16
SNX29-207ENST00000568949 GBP3Q9H0R5 595 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 C6orf50Q9HD87 102 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 FAM217BQ9NTX9 383 aaPredicted RBP14.04□□□□□ -0.16
SNX29-207ENST00000568949 DLL3Q9NYJ7 618 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 PIN4Q9Y237 131 aaKnown RBP14.04□□□□□ -0.16
SNX29-207ENST00000568949 SSX2IPQ9Y2D8 614 aa14.04□□□□□ -0.16
SNX29-207ENST00000568949 IGKV6-21A0A0C4DH24 114 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 CCDC195A0A1B0GUA6 201 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 GOLGA8AA7E2F4 631 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 GOLGA8BA8MQT2 603 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 B4GALT3O60512 393 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 DDHD2O94830 711 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 PAPLNO95428 1278 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 SSBP05455 408 aaKnown RBP eCLIP14.03□□□□□ -0.16
SNX29-207ENST00000568949 URODP06132 367 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 ADH1AP07327 375 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 SP9P0CG40 484 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 GNA11P29992 359 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 EXOSC10Q01780 885 aaKnown RBP14.03□□□□□ -0.16
SNX29-207ENST00000568949 RDM1Q8NG50 284 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 RSAD2Q8WXG1 361 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 RIN2Q8WYP3 895 aaPredicted RBP14.03□□□□□ -0.16
SNX29-207ENST00000568949 RPS6KC1Q96S38 1066 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 CEP89Q96ST8 783 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 HINFPQ9BQA5 517 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 MAN1C1Q9NR34 630 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 DLGAP2Q9P1A6 1054 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 KANSL3Q9P2N6 904 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 CA14Q9ULX7 337 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 FAN1Q9Y2M0 1017 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 SIT1Q9Y3P8 196 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 CLUHO75153 1309 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 EPG5Q9HCE0 2579 aa14.03□□□□□ -0.16
SNX29-207ENST00000568949 WDR87Q6ZQQ6 2873 aa14.02□□□□□ -0.16
SNX29-207ENST00000568949 GPR179Q6PRD1 2367 aa14.02□□□□□ -0.16
SNX29-207ENST00000568949 CNTNAP2Q9UHC6 1331 aa14.02□□□□□ -0.17
SNX29-207ENST00000568949 ADAMTS3O15072 1205 aa14.02□□□□□ -0.17
SNX29-207ENST00000568949 INPPL1O15357 1258 aa14.02□□□□□ -0.17
SNX29-207ENST00000568949 MSH4O15457 936 aa14.02□□□□□ -0.17
SNX29-207ENST00000568949 GAS7O60861 476 aa14.02□□□□□ -0.17
SNX29-207ENST00000568949 C1RP00736 705 aa14.02□□□□□ -0.17
SNX29-207ENST00000568949 SOD2P04179 222 aa14.02□□□□□ -0.17
SNX29-207ENST00000568949 CDC27P30260 824 aa14.02□□□□□ -0.17
SNX29-207ENST00000568949 XKR3Q5GH77 459 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms