RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 TMEM143Q96AN5 459 aa21.14■□□□□ 0.97
SPSB3-210ENST00000568416 NGRNQ9NPE2 291 aaKnown RBP21.14■□□□□ 0.97
SPSB3-210ENST00000568416 FAM105AQ9NUU6 356 aa21.14■□□□□ 0.97
SPSB3-210ENST00000568416 WNT7AO00755 349 aa21.13■□□□□ 0.97
SPSB3-210ENST00000568416 GAS2O43903 313 aaKnown RBP21.13■□□□□ 0.97
SPSB3-210ENST00000568416 ZNF623O75123 536 aa21.13■□□□□ 0.97
SPSB3-210ENST00000568416 SLITRK3O94933 977 aa21.13■□□□□ 0.97
SPSB3-210ENST00000568416 RAB27AP51159 221 aa21.13■□□□□ 0.97
SPSB3-210ENST00000568416 LAMTOR4Q0VGL1 99 aa21.13■□□□□ 0.97
SPSB3-210ENST00000568416 EMC2Q15006 297 aa21.13■□□□□ 0.97
SPSB3-210ENST00000568416 TMEM184AQ6ZMB5 413 aa21.13■□□□□ 0.97
SPSB3-210ENST00000568416 SRGAP1Q7Z6B7 1085 aa21.13■□□□□ 0.97
SPSB3-210ENST00000568416 LPPQ93052 612 aa21.13■□□□□ 0.97
SPSB3-210ENST00000568416 MINDY3Q9H8M7 445 aa21.13■□□□□ 0.97
SPSB3-210ENST00000568416 ENTPD7Q9NQZ7 604 aa21.13■□□□□ 0.97
SPSB3-210ENST00000568416 BMP2KQ9NSY1 1161 aaPredicted RBP21.13■□□□□ 0.97
SPSB3-210ENST00000568416 AGPAT5Q9NUQ2 364 aa21.13■□□□□ 0.97
SPSB3-210ENST00000568416 PCDHA12Q9UN75 941 aa21.13■□□□□ 0.97
SPSB3-210ENST00000568416 HIDE1A8MVS5 230 aa21.12■□□□□ 0.97
SPSB3-210ENST00000568416 PRR33A8MZF0 331 aa21.12■□□□□ 0.97
SPSB3-210ENST00000568416 ZBTB39O15060 712 aa21.12■□□□□ 0.97
SPSB3-210ENST00000568416 LYPLA2O95372 231 aa21.12■□□□□ 0.97
SPSB3-210ENST00000568416 BCAR1P56945 870 aa21.12■□□□□ 0.97
SPSB3-210ENST00000568416 CALCRLQ16602 461 aa21.12■□□□□ 0.97
SPSB3-210ENST00000568416 XKR9Q5GH70 373 aa21.12■□□□□ 0.97
SPSB3-210ENST00000568416 TCP11Q8WWU5 503 aa21.12■□□□□ 0.97
SPSB3-210ENST00000568416 HSD17B14Q9BPX1 270 aa21.12■□□□□ 0.97
SPSB3-210ENST00000568416 EIF2AK1Q9BQI3 630 aaKnown RBP21.12■□□□□ 0.97
SPSB3-210ENST00000568416 USP15Q9Y4E8 981 aaPredicted RBP21.12■□□□□ 0.97
SPSB3-210ENST00000568416 MYO7AQ13402 2215 aa21.12■□□□□ 0.97
SPSB3-210ENST00000568416 MEIS3P2A8K0S8 358 aa21.11■□□□□ 0.97
SPSB3-210ENST00000568416 ASAP2O43150 1006 aa21.11■□□□□ 0.97
SPSB3-210ENST00000568416 SRGAP2CP0DJJ0 459 aa21.11■□□□□ 0.97
SPSB3-210ENST00000568416 FOSBP53539 338 aa21.11■□□□□ 0.97
SPSB3-210ENST00000568416 TRIM29Q14134 588 aa21.11■□□□□ 0.97
SPSB3-210ENST00000568416 LONRF3Q496Y0 759 aa21.11■□□□□ 0.97
SPSB3-210ENST00000568416 TMC7Q7Z402 723 aa21.11■□□□□ 0.97
SPSB3-210ENST00000568416 FERMT3Q86UX7 667 aa21.11■□□□□ 0.97
SPSB3-210ENST00000568416 TPH2Q8IWU9 490 aa21.11■□□□□ 0.97
SPSB3-210ENST00000568416 MTMR9Q96QG7 549 aa21.11■□□□□ 0.97
SPSB3-210ENST00000568416 MTRQ99707 1265 aa21.11■□□□□ 0.97
SPSB3-210ENST00000568416 TTC12Q9H892 705 aaPredicted RBP21.11■□□□□ 0.97
SPSB3-210ENST00000568416 XPNPEP1Q9NQW7 623 aa21.11■□□□□ 0.97
SPSB3-210ENST00000568416 NCOR1O75376 2440 aa21.11■□□□□ 0.97
SPSB3-210ENST00000568416 NT5C1B-RDH14C9J2C7 533 aa21.1■□□□□ 0.97
SPSB3-210ENST00000568416 NEMFO60524 1076 aa21.1■□□□□ 0.97
SPSB3-210ENST00000568416 OFD1O75665 1012 aa21.1■□□□□ 0.97
SPSB3-210ENST00000568416 HOXA11P31270 313 aaPredicted RBP21.1■□□□□ 0.97
SPSB3-210ENST00000568416 ALDH7A1P49419 539 aaKnown RBP21.1■□□□□ 0.97
SPSB3-210ENST00000568416 NOMO2Q5JPE7 1267 aa21.1■□□□□ 0.97
SPSB3-210ENST00000568416 UBXN11Q5T124 520 aa21.1■□□□□ 0.97
SPSB3-210ENST00000568416 GLB1LQ6UWU2 654 aa21.1■□□□□ 0.97
SPSB3-210ENST00000568416 MRPL10Q7Z7H8 261 aaKnown RBP21.1■□□□□ 0.97
SPSB3-210ENST00000568416 RNF135Q8IUD6 432 aa21.1■□□□□ 0.97
SPSB3-210ENST00000568416 SUSD6Q92537 303 aa21.1■□□□□ 0.97
SPSB3-210ENST00000568416 PGBD4Q96DM1 585 aa21.1■□□□□ 0.97
SPSB3-210ENST00000568416 NRDE2Q9H7Z3 1164 aa21.1■□□□□ 0.97
SPSB3-210ENST00000568416 TBC1D13Q9NVG8 400 aa21.1■□□□□ 0.97
SPSB3-210ENST00000568416 HCN4Q9Y3Q4 1203 aa21.1■□□□□ 0.97
SPSB3-210ENST00000568416 ARIH1Q9Y4X5 557 aaPredicted RBP21.1■□□□□ 0.97
SPSB3-210ENST00000568416 PCDHB2Q9Y5E7 798 aa21.1■□□□□ 0.97
SPSB3-210ENST00000568416 LOC730098B7Z3J9 87 aa21.09■□□□□ 0.97
SPSB3-210ENST00000568416 SRGAP2BP0DMP2 458 aa21.09■□□□□ 0.97
SPSB3-210ENST00000568416 TXKP42681 527 aa21.09■□□□□ 0.97
SPSB3-210ENST00000568416 SMC1AQ14683 1233 aaKnown RBP21.09■□□□□ 0.97
SPSB3-210ENST00000568416 HERC4Q5GLZ8 1057 aaPredicted RBP21.09■□□□□ 0.97
SPSB3-210ENST00000568416 ANKRD54Q6NXT1 300 aa21.09■□□□□ 0.97
SPSB3-210ENST00000568416 AGMOQ6ZNB7 445 aa21.09■□□□□ 0.97
SPSB3-210ENST00000568416 MRPL43Q8N983 215 aaKnown RBP21.09■□□□□ 0.97
SPSB3-210ENST00000568416 RNF149Q8NC42 400 aa21.09■□□□□ 0.97
SPSB3-210ENST00000568416 S1PR5Q9H228 398 aa21.09■□□□□ 0.97
SPSB3-210ENST00000568416 ANKEF1Q9NU02 776 aa21.09■□□□□ 0.97
SPSB3-210ENST00000568416 INPP5FQ9Y2H2 1132 aa21.09■□□□□ 0.97
SPSB3-210ENST00000568416 CARNS1A5YM72 827 aa21.08■□□□□ 0.97
SPSB3-210ENST00000568416 C2orf71A6NGG8 1288 aa21.08■□□□□ 0.97
SPSB3-210ENST00000568416 ZC3H11AO75152 810 aaKnown RBP eCLIP21.08■□□□□ 0.97
SPSB3-210ENST00000568416 GALTP07902 379 aa21.08■□□□□ 0.97
SPSB3-210ENST00000568416 PLA2G5P39877 138 aa21.08■□□□□ 0.97
SPSB3-210ENST00000568416 TECP42680 631 aa21.08■□□□□ 0.97
SPSB3-210ENST00000568416 CBX2Q14781 532 aaPredicted RBP21.08■□□□□ 0.97
SPSB3-210ENST00000568416 SYCE2Q6PIF2 218 aa21.08■□□□□ 0.97
SPSB3-210ENST00000568416 TMEM173Q86WV6 379 aaPredicted RBP21.08■□□□□ 0.97
SPSB3-210ENST00000568416 TMEM169Q96HH4 297 aa21.08■□□□□ 0.97
SPSB3-210ENST00000568416 PHF7Q9BWX1 381 aaPredicted RBP21.08■□□□□ 0.97
SPSB3-210ENST00000568416 TMEM60Q9H2L4 133 aa21.08■□□□□ 0.97
SPSB3-210ENST00000568416 MUTYHQ9UIF7 546 aa21.08■□□□□ 0.97
SPSB3-210ENST00000568416 LIMCH1Q9UPQ0 1083 aa21.08■□□□□ 0.97
SPSB3-210ENST00000568416 POU5F1BQ06416 359 aa21.07■□□□□ 0.96
SPSB3-210ENST00000568416 MXD4Q14582 209 aaPredicted RBP21.07■□□□□ 0.96
SPSB3-210ENST00000568416 LLGL2Q6P1M3 1020 aa21.07■□□□□ 0.96
SPSB3-210ENST00000568416 IFNLR1Q8IU57 520 aaPredicted RBP21.07■□□□□ 0.96
SPSB3-210ENST00000568416 IGSF21Q96ID5 467 aa21.07■□□□□ 0.96
SPSB3-210ENST00000568416 ZBP1Q9H171 429 aa21.07■□□□□ 0.96
SPSB3-210ENST00000568416 B4GALT3O60512 393 aa21.06■□□□□ 0.96
SPSB3-210ENST00000568416 DGAT1O75907 488 aa21.06■□□□□ 0.96
SPSB3-210ENST00000568416 RARRES1P49788 294 aa21.06■□□□□ 0.96
SPSB3-210ENST00000568416 PTENP60484 403 aa21.06■□□□□ 0.96
SPSB3-210ENST00000568416 GUCY1B3Q02153 619 aa21.06■□□□□ 0.96
SPSB3-210ENST00000568416 PCBP1Q15365 356 aaKnown RBP eCLIP21.06■□□□□ 0.96
SPSB3-210ENST00000568416 DDX53Q86TM3 631 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms