RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 CLASP2O75122 1294 aaKnown RBP16.89■□□□□ 0.29
COMMD4-223ENST00000568301 ZNF623O75123 536 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 CXCL14O95715 111 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 WEE2P0C1S8 567 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 NUBP1P53384 320 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 PSMC5P62195 406 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 MTMR3Q13615 1198 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 NPY5RQ15761 445 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 CES5AQ6NT32 575 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 ASCL5Q7RTU5 278 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 TMEM105Q8N8V8 129 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 TMEM169Q96HH4 297 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 NECTIN4Q96NY8 510 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 FDXACB1Q9BRP7 624 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-223ENST00000568301 TM6SF1Q9BZW5 370 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 SUCLA2Q9P2R7 463 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-223ENST00000568301 IRAK3Q9Y616 596 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 CYP46A1Q9Y6A2 500 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 FRYLO94915 3013 aa16.88■□□□□ 0.29
COMMD4-223ENST00000568301 TMEM150BA6NC51 233 aa16.88■□□□□ 0.29
COMMD4-223ENST00000568301 NT5C1B-RDH14C9J2C7 533 aa16.88■□□□□ 0.29
COMMD4-223ENST00000568301 ASGR2P07307 311 aa16.88■□□□□ 0.29
COMMD4-223ENST00000568301 POLGP54098 1239 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-223ENST00000568301 GIT2Q14161 759 aa16.88■□□□□ 0.29
COMMD4-223ENST00000568301 NONOQ15233 471 aaKnown RBP eCLIP16.88■□□□□ 0.29
COMMD4-223ENST00000568301 TWF2Q6IBS0 349 aaKnown RBP16.88■□□□□ 0.29
COMMD4-223ENST00000568301 KANK3Q6NY19 840 aa16.88■□□□□ 0.29
COMMD4-223ENST00000568301 CPLX2Q6PUV4 134 aaKnown RBP16.88■□□□□ 0.29
COMMD4-223ENST00000568301 GLB1LQ6UWU2 654 aa16.88■□□□□ 0.29
COMMD4-223ENST00000568301 ANO5Q75V66 913 aa16.88■□□□□ 0.29
COMMD4-223ENST00000568301 RHPN2Q8IUC4 686 aa16.88■□□□□ 0.29
COMMD4-223ENST00000568301 C12orf76Q8N812 135 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-223ENST00000568301 DDX25Q9UHL0 483 aaKnown RBP16.88■□□□□ 0.29
COMMD4-223ENST00000568301 DKC1O60832 514 aaKnown RBP eCLIP16.87■□□□□ 0.29
COMMD4-223ENST00000568301 CA8P35219 290 aa16.87■□□□□ 0.29
COMMD4-223ENST00000568301 RAB27AP51159 221 aa16.87■□□□□ 0.29
COMMD4-223ENST00000568301 PPP2R5CQ13362 524 aa16.87■□□□□ 0.29
COMMD4-223ENST00000568301 RARS2Q5T160 578 aaKnown RBP16.87■□□□□ 0.29
COMMD4-223ENST00000568301 KRT25Q7Z3Z0 450 aa16.87■□□□□ 0.29
COMMD4-223ENST00000568301 DDX53Q86TM3 631 aaKnown RBP16.87■□□□□ 0.29
COMMD4-223ENST00000568301 EXOC8Q8IYI6 725 aa16.87■□□□□ 0.29
COMMD4-223ENST00000568301 VPS52Q8N1B4 723 aa16.87■□□□□ 0.29
COMMD4-223ENST00000568301 FAM20AQ96MK3 541 aa16.87■□□□□ 0.29
COMMD4-223ENST00000568301 SH2D3AQ9BRG2 576 aa16.87■□□□□ 0.29
COMMD4-223ENST00000568301 FAM105AQ9NUU6 356 aa16.87■□□□□ 0.29
COMMD4-223ENST00000568301 PIN4Q9Y237 131 aaKnown RBP16.87■□□□□ 0.29
COMMD4-223ENST00000568301 PPME1Q9Y570 386 aa16.87■□□□□ 0.29
COMMD4-223ENST00000568301 ZC3H11AO75152 810 aaKnown RBP eCLIP16.86■□□□□ 0.29
COMMD4-223ENST00000568301 OFD1O75665 1012 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 CTSAP10619 480 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 MTHFRP42898 656 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 QARSP47897 775 aaKnown RBP16.86■□□□□ 0.29
COMMD4-223ENST00000568301 INF2Q27J81 1249 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 NOMO2Q5JPE7 1267 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 CATSPER4Q7RTX7 472 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 FEZF2Q8TBJ5 459 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 AUTS2Q8WXX7 1259 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 LPPQ93052 612 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 PGBD4Q96DM1 585 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 IGSF21Q96ID5 467 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 ZBP1Q9H171 429 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 NRDE2Q9H7Z3 1164 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 IFT122Q9HBG6 1241 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 CYP26B1Q9NR63 512 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 TBC1D13Q9NVG8 400 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 LIMD1Q9UGP4 676 aa16.86■□□□□ 0.29
COMMD4-223ENST00000568301 FAM186AA6NE01 2351 aa16.85■□□□□ 0.29
COMMD4-223ENST00000568301 DMXL1Q9Y485 3027 aa16.85■□□□□ 0.29
COMMD4-223ENST00000568301 EML1O00423 815 aa16.85■□□□□ 0.29
COMMD4-223ENST00000568301 GALTP07902 379 aa16.85■□□□□ 0.29
COMMD4-223ENST00000568301 NBL1P41271 181 aa16.85■□□□□ 0.29
COMMD4-223ENST00000568301 ASTLQ6HA08 431 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-223ENST00000568301 PPP4R3AQ6IN85 833 aa16.85■□□□□ 0.29
COMMD4-223ENST00000568301 TMEM173Q86WV6 379 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-223ENST00000568301 KSR1Q8IVT5 923 aa16.85■□□□□ 0.29
COMMD4-223ENST00000568301 TMEM87AQ8NBN3 555 aa16.85■□□□□ 0.29
COMMD4-223ENST00000568301 SLC7A3Q8WY07 619 aa16.85■□□□□ 0.29
COMMD4-223ENST00000568301 NLRP4Q96MN2 994 aa16.85■□□□□ 0.29
COMMD4-223ENST00000568301 AIFM3Q96NN9 605 aa16.85■□□□□ 0.29
COMMD4-223ENST00000568301 KCNMB3Q9NPA1 279 aa16.85■□□□□ 0.29
COMMD4-223ENST00000568301 DZANK1Q9NVP4 752 aa16.85■□□□□ 0.29
COMMD4-223ENST00000568301 STK39Q9UEW8 545 aa16.85■□□□□ 0.29
COMMD4-223ENST00000568301 VAV3Q9UKW4 847 aa16.85■□□□□ 0.29
COMMD4-223ENST00000568301 PRR23AA6NEV1 266 aa16.84■□□□□ 0.29
COMMD4-223ENST00000568301 TBX3O15119 743 aa16.84■□□□□ 0.29
COMMD4-223ENST00000568301 SLC37A4O43826 429 aa16.84■□□□□ 0.29
COMMD4-223ENST00000568301 P4HBP07237 508 aaKnown RBP16.84■□□□□ 0.29
COMMD4-223ENST00000568301 GCFC2P16383 781 aaKnown RBP16.84■□□□□ 0.29
COMMD4-223ENST00000568301 EPCAMP16422 314 aa16.84■□□□□ 0.29
COMMD4-223ENST00000568301 RNASELQ05823 741 aaKnown RBP16.84■□□□□ 0.29
COMMD4-223ENST00000568301 LETM2Q2VYF4 491 aa16.84■□□□□ 0.29
COMMD4-223ENST00000568301 ATAT1Q5SQI0 421 aa16.84■□□□□ 0.29
COMMD4-223ENST00000568301 KIAA1841Q6NSI8 718 aa16.84■□□□□ 0.29
COMMD4-223ENST00000568301 SRGAP1Q7Z6B7 1085 aa16.84■□□□□ 0.29
COMMD4-223ENST00000568301 MRPL10Q7Z7H8 261 aaKnown RBP16.84■□□□□ 0.29
COMMD4-223ENST00000568301 ZDHHC14Q8IZN3 488 aa16.84■□□□□ 0.29
COMMD4-223ENST00000568301 TDRD5Q8NAT2 981 aaKnown RBP16.84■□□□□ 0.29
COMMD4-223ENST00000568301 SLC22A17Q8WUG5 538 aa16.84■□□□□ 0.29
COMMD4-223ENST00000568301 LARP6Q9BRS8 491 aaKnown RBP16.84■□□□□ 0.29
COMMD4-223ENST00000568301 PHF20Q9BVI0 1012 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms