RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 RGL1Q9NZL6 768 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 CD207Q9UJ71 328 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 LZTS1Q9Y250 596 aa14.38□□□□□ -0.11
TSC2-220ENST00000568238 FSD2A1L4K1 749 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 SKIP12755 728 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 ATP2B1P20020 1258 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 SYT1P21579 422 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 PHKA2P46019 1235 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 PLCB3Q01970 1234 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 ZP2Q05996 745 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 ADAM15Q13444 863 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 CTTNQ14247 550 aaKnown RBP14.37□□□□□ -0.11
TSC2-220ENST00000568238 EMC2Q15006 297 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 SMAD2Q15796 467 aaKnown RBP14.37□□□□□ -0.11
TSC2-220ENST00000568238 PDE12Q6L8Q7 609 aaKnown RBP14.37□□□□□ -0.11
TSC2-220ENST00000568238 KCNT2Q6UVM3 1135 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 NOSTRINQ8IVI9 506 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 ZNF579Q8NAF0 562 aaKnown RBP14.37□□□□□ -0.11
TSC2-220ENST00000568238 RSPH1Q8WYR4 309 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 MRPS27Q92552 414 aaKnown RBP14.37□□□□□ -0.11
TSC2-220ENST00000568238 TMEM143Q96AN5 459 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 TRAIPQ9BWF2 469 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 TLE6Q9H808 572 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 ENTPD7Q9NQZ7 604 aa14.37□□□□□ -0.11
TSC2-220ENST00000568238 BMP2KQ9NSY1 1161 aaPredicted RBP14.37□□□□□ -0.11
TSC2-220ENST00000568238 WNT7AO00755 349 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 FSCN2O14926 492 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 MBTPS2O43462 519 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 PBX3P40426 434 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 RAB27AP51159 221 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 ERVFC1P60507 584 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 XKR9Q5GH70 373 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 PLPP4Q5VZY2 271 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 FERMT3Q86UX7 667 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 TPH2Q8IWU9 490 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 ADHFE1Q8IWW8 467 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 TCP11Q8WWU5 503 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 PRPF31Q8WWY3 499 aaKnown RBP14.36□□□□□ -0.11
TSC2-220ENST00000568238 MSLNLQ96KJ4 702 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 CCDC43Q96MW1 224 aaKnown RBP14.36□□□□□ -0.11
TSC2-220ENST00000568238 POP1Q99575 1024 aaKnown RBP14.36□□□□□ -0.11
TSC2-220ENST00000568238 CDCA3Q99618 268 aaPredicted RBP14.36□□□□□ -0.11
TSC2-220ENST00000568238 EIF2AK1Q9BQI3 630 aaKnown RBP14.36□□□□□ -0.11
TSC2-220ENST00000568238 TTC12Q9H892 705 aaPredicted RBP14.36□□□□□ -0.11
TSC2-220ENST00000568238 IFT122Q9HBG6 1241 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 TSHZ2Q9NRE2 1034 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 AGPAT5Q9NUQ2 364 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 FAM105AQ9NUU6 356 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 PUF60Q9UHX1 559 aaKnown RBP14.36□□□□□ -0.11
TSC2-220ENST00000568238 PCDHA12Q9UN75 941 aa14.36□□□□□ -0.11
TSC2-220ENST00000568238 PI4K2BG5E9Z4 385 aa14.35□□□□□ -0.11
TSC2-220ENST00000568238 GLP2RO95838 553 aa14.35□□□□□ -0.11
TSC2-220ENST00000568238 SRGAP2CP0DJJ0 459 aa14.35□□□□□ -0.11
TSC2-220ENST00000568238 U2AF2P26368 475 aaKnown RBP eCLIP14.35□□□□□ -0.11
TSC2-220ENST00000568238 KRT17Q04695 432 aa14.35□□□□□ -0.11
TSC2-220ENST00000568238 LAMTOR4Q0VGL1 99 aa14.35□□□□□ -0.11
TSC2-220ENST00000568238 DUSP6Q16828 381 aa14.35□□□□□ -0.11
TSC2-220ENST00000568238 TMEM31Q5JXX7 168 aa14.35□□□□□ -0.11
TSC2-220ENST00000568238 GLB1LQ6UWU2 654 aa14.35□□□□□ -0.11
TSC2-220ENST00000568238 SRGAP1Q7Z6B7 1085 aa14.35□□□□□ -0.11
TSC2-220ENST00000568238 SMRP1Q8NCR6 262 aa14.35□□□□□ -0.11
TSC2-220ENST00000568238 LPPQ93052 612 aa14.35□□□□□ -0.11
TSC2-220ENST00000568238 MTRQ99707 1265 aa14.35□□□□□ -0.11
TSC2-220ENST00000568238 TCF25Q9BQ70 676 aa14.35□□□□□ -0.11
TSC2-220ENST00000568238 SPG21Q9NZD8 308 aa14.35□□□□□ -0.11
TSC2-220ENST00000568238 CLEC1BQ9P126 229 aa14.35□□□□□ -0.11
TSC2-220ENST00000568238 BARX2Q9UMQ3 279 aaPredicted RBP14.35□□□□□ -0.11
TSC2-220ENST00000568238 WDFY4Q6ZS81 3184 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 PER2O15055 1255 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 ZBTB39O15060 712 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 STX6O43752 255 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 SLITRK3O94933 977 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 LYPLA2O95372 231 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 EYA4O95677 639 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 SRGAP2BP0DMP2 458 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 TXKP42681 527 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 BCAR1P56945 870 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 COASYQ13057 564 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 LONRF3Q496Y0 759 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 SLC39A11Q8N1S5 342 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 RNF149Q8NC42 400 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 MTMR9Q96QG7 549 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 HSD17B14Q9BPX1 270 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 NGRNQ9NPE2 291 aaKnown RBP14.34□□□□□ -0.11
TSC2-220ENST00000568238 NOL7Q9UMY1 257 aaKnown RBP14.34□□□□□ -0.11
TSC2-220ENST00000568238 MTMR6Q9Y217 621 aa14.34□□□□□ -0.11
TSC2-220ENST00000568238 CARNS1A5YM72 827 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 FAM86C2PA6NEL3 165 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 POTEMA6NI47 508 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 C19orf67A6NJJ6 358 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 MEIS3P2A8K0S8 358 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 ASAP2O43150 1006 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 ZNF623O75123 536 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 ZC3H11AO75152 810 aaKnown RBP eCLIP14.33□□□□□ -0.12
TSC2-220ENST00000568238 DGAT1O75907 488 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 ALADP13716 330 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 MCM7P33993 719 aa14.33□□□□□ -0.12
TSC2-220ENST00000568238 ALDH7A1P49419 539 aaKnown RBP14.33□□□□□ -0.12
TSC2-220ENST00000568238 MXD4Q14582 209 aaPredicted RBP14.33□□□□□ -0.12
TSC2-220ENST00000568238 NBR1Q14596 966 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms