RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 DAW1Q8N136 415 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 KCTD17Q8N5Z5 321 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 RASSF8Q8NHQ8 419 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 GUCD1Q96NT3 240 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 CDX2Q99626 313 aaPredicted RBP14.41□□□□□ -0.1
CNOT1-213ENST00000568158 CHST12Q9NRB3 414 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 C1orf112Q9NSG2 853 aa14.41□□□□□ -0.1
CNOT1-213ENST00000568158 SZT2Q5T011 3432 aa14.4□□□□□ -0.1
CNOT1-213ENST00000568158 TMEM265A0A087WTH1 108 aa14.4□□□□□ -0.1
CNOT1-213ENST00000568158 LINC01553A4QN01 128 aa14.4□□□□□ -0.1
CNOT1-213ENST00000568158 HIP1RO75146 1068 aa14.4□□□□□ -0.1
CNOT1-213ENST00000568158 HOXA11P31270 313 aaPredicted RBP14.4□□□□□ -0.1
CNOT1-213ENST00000568158 DDIT3P35638 169 aa14.4□□□□□ -0.1
CNOT1-213ENST00000568158 FAM43BQ6ZT52 329 aaPredicted RBP14.4□□□□□ -0.1
CNOT1-213ENST00000568158 ECHDC2Q86YB7 292 aa14.4□□□□□ -0.1
CNOT1-213ENST00000568158 MYLIPQ8WY64 445 aa14.4□□□□□ -0.1
CNOT1-213ENST00000568158 ZNF689Q96CS4 500 aaPredicted RBP14.4□□□□□ -0.1
CNOT1-213ENST00000568158 CPB2Q96IY4 423 aa14.4□□□□□ -0.1
CNOT1-213ENST00000568158 PRDM12Q9H4Q4 367 aa14.4□□□□□ -0.1
CNOT1-213ENST00000568158 RCOR1Q9UKL0 485 aa14.4□□□□□ -0.1
CNOT1-213ENST00000568158 CFAP45Q9UL16 551 aa14.4□□□□□ -0.1
CNOT1-213ENST00000568158 PIN4Q9Y237 131 aaKnown RBP14.4□□□□□ -0.1
CNOT1-213ENST00000568158 USP20Q9Y2K6 914 aa14.4□□□□□ -0.1
CNOT1-213ENST00000568158 TCHHQ07283 1943 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 A0A087X0B3 334 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 A0A0U1RQF3 1178 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 CUTAO60888 179 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 PEX3P56589 373 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 MBTD1Q05BQ5 628 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 MAPK7Q13164 816 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 AMHR2Q16671 573 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 LONRF3Q496Y0 759 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 PAN2Q504Q3 1202 aaKnown RBP14.39□□□□□ -0.11
CNOT1-213ENST00000568158 AXDND1Q5T1B0 1012 aaPredicted RBP14.39□□□□□ -0.11
CNOT1-213ENST00000568158 RRAGBQ5VZM2 374 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 ATL3Q6DD88 541 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 RNF169Q8NCN4 708 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 ARNTL2Q8WYA1 636 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 RAD54LQ92698 747 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 KIFAP3Q92845 792 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 IFT74Q96LB3 600 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 AGPAT5Q9NUQ2 364 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 CCDC39Q9UFE4 941 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 PCDHA7Q9UN72 937 aa14.39□□□□□ -0.11
CNOT1-213ENST00000568158 EPOPA6NHQ4 379 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 TTLL13PA6NNM8 815 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 CCDC169A6NNP5 214 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 B4GALT5O43286 388 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 TSPAN1O60635 241 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 ERLIN2O94905 339 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 FGFR1P11362 822 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 LIG1P18858 919 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 NCLP19338 710 aaKnown RBP14.38□□□□□ -0.11
CNOT1-213ENST00000568158 GUCY2CP25092 1073 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 NAMPTP43490 491 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 BTG3Q14201 252 aaPredicted RBP14.38□□□□□ -0.11
CNOT1-213ENST00000568158 UBXN11Q5T124 520 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 TWF2Q6IBS0 349 aaKnown RBP14.38□□□□□ -0.11
CNOT1-213ENST00000568158 SHC4Q6S5L8 630 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 GPBP1Q86WP2 473 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 CDR2LQ86X02 465 aaPredicted RBP14.38□□□□□ -0.11
CNOT1-213ENST00000568158 FIBCD1Q8N539 461 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 PDILTQ8N807 584 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 DEPTORQ8TB45 409 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 C17orf80Q9BSJ5 609 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 KIFC3Q9BVG8 833 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 NFKBIZQ9BYH8 718 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 ELAC1Q9H777 363 aaKnown RBP14.38□□□□□ -0.11
CNOT1-213ENST00000568158 RC3H2Q9HBD1 1191 aaKnown RBP14.38□□□□□ -0.11
CNOT1-213ENST00000568158 RNF19AQ9NV58 838 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 TMEM161AQ9NX61 479 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 DACT1Q9NYF0 836 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 MTUS1Q9ULD2 1270 aa14.38□□□□□ -0.11
CNOT1-213ENST00000568158 TBKBP1A7MCY6 615 aa14.37□□□□□ -0.11
CNOT1-213ENST00000568158 ATF7P17544 494 aaPredicted RBP14.37□□□□□ -0.11
CNOT1-213ENST00000568158 ARF4P18085 180 aaPredicted RBP14.37□□□□□ -0.11
CNOT1-213ENST00000568158 TXLNAP40222 546 aa14.37□□□□□ -0.11
CNOT1-213ENST00000568158 NPTX2P47972 431 aa14.37□□□□□ -0.11
CNOT1-213ENST00000568158 ME1P48163 572 aa14.37□□□□□ -0.11
CNOT1-213ENST00000568158 ERVK-21P61565 698 aa14.37□□□□□ -0.11
CNOT1-213ENST00000568158 PPP2R5AQ15172 486 aa14.37□□□□□ -0.11
CNOT1-213ENST00000568158 NAALADL2Q58DX5 795 aa14.37□□□□□ -0.11
CNOT1-213ENST00000568158 CDCA2Q69YH5 1023 aaPredicted RBP14.37□□□□□ -0.11
CNOT1-213ENST00000568158 ZNF598Q86UK7 904 aaKnown RBP14.37□□□□□ -0.11
CNOT1-213ENST00000568158 ZBTB8OSQ8IWT0 167 aa14.37□□□□□ -0.11
CNOT1-213ENST00000568158 LARP4BQ92615 738 aaKnown RBP14.37□□□□□ -0.11
CNOT1-213ENST00000568158 LPPQ93052 612 aa14.37□□□□□ -0.11
CNOT1-213ENST00000568158 TGS1Q96RS0 853 aaKnown RBP14.37□□□□□ -0.11
CNOT1-213ENST00000568158 FZD8Q9H461 694 aa14.37□□□□□ -0.11
CNOT1-213ENST00000568158 FAM105AQ9NUU6 356 aa14.37□□□□□ -0.11
CNOT1-213ENST00000568158 ADGRA3Q8IWK6 1321 aa14.37□□□□□ -0.11
CNOT1-213ENST00000568158 MYH11P35749 1972 aa14.36□□□□□ -0.11
CNOT1-213ENST00000568158 MEIS3P2A8K0S8 358 aa14.36□□□□□ -0.11
CNOT1-213ENST00000568158 EOMESO95936 686 aa14.36□□□□□ -0.11
CNOT1-213ENST00000568158 EDN1P05305 212 aa14.36□□□□□ -0.11
CNOT1-213ENST00000568158 AXLP30530 894 aa14.36□□□□□ -0.11
CNOT1-213ENST00000568158 NCBP1Q09161 790 aaKnown RBP14.36□□□□□ -0.11
CNOT1-213ENST00000568158 GIT2Q14161 759 aa14.36□□□□□ -0.11
CNOT1-213ENST00000568158 ADGRE1Q14246 886 aa14.36□□□□□ -0.11
CNOT1-213ENST00000568158 TMEM192Q8IY95 271 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms