RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 CHST12Q9NRB3 414 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 LIMCH1Q9UPQ0 1083 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 FAM50BQ9Y247 325 aa13.65□□□□□ -0.22
GTF3C1-208ENST00000567843 PLXNA4Q9HCM2 1894 aa13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 POTEMA6NI47 508 aa13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 FSCN2O14926 492 aa13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 ZC3H11AO75152 810 aaKnown RBP eCLIP13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 EOMESO95936 686 aa13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 BCAR1P56945 870 aa13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 UBE3AQ05086 875 aa13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 SMAD4Q13485 552 aaKnown RBP13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 ZNF174Q15697 407 aa13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 SMAD2Q15796 467 aaKnown RBP13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 TMEM31Q5JXX7 168 aa13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 FAM43BQ6ZT52 329 aaPredicted RBP13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 MAEAQ7L5Y9 396 aa13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 TMC7Q7Z402 723 aa13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 C8orf76Q96K31 380 aa13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 MSLNLQ96KJ4 702 aa13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 MTRQ99707 1265 aa13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 FAM105AQ9NUU6 356 aa13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 SPG21Q9NZD8 308 aa13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 PUF60Q9UHX1 559 aaKnown RBP13.64□□□□□ -0.23
GTF3C1-208ENST00000567843 PI4K2BG5E9Z4 385 aa13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 EIF5BO60841 1220 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 AFF1P51825 1210 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 PLCB3Q01970 1234 aa13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 KRT17Q04695 432 aa13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 SAFBQ15424 915 aaKnown RBP eCLIP13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 DUSP6Q16828 381 aa13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 CSPP1Q1MSJ5 1256 aa13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 C8orf34Q49A92 452 aa13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 FERMT3Q86UX7 667 aa13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 TMEM173Q86WV6 379 aaPredicted RBP13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 ADHFE1Q8IWW8 467 aa13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 SLC39A11Q8N1S5 342 aa13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 ASAP3Q8TDY4 903 aa13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 AUTS2Q8WXX7 1259 aa13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 CCDC43Q96MW1 224 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 MTMR9Q96QG7 549 aa13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 KIF2CQ99661 725 aa13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 HSD17B14Q9BPX1 270 aa13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 PCDHB2Q9Y5E7 798 aa13.63□□□□□ -0.23
GTF3C1-208ENST00000567843 B4GALT3O60512 393 aa13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 OFD1O75665 1012 aa13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 HOXA11P31270 313 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 PPM1AP35813 382 aa13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 ALDH7A1P49419 539 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 RNASELQ05823 741 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 NBR1Q14596 966 aa13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 NOMO2Q5JPE7 1267 aa13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 UBXN11Q5T124 520 aa13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 GLB1LQ6UWU2 654 aa13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 SRGAP1Q7Z6B7 1085 aa13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 BCL7CQ8WUZ0 217 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 TCP11Q8WWU5 503 aa13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 CPB2Q96IY4 423 aa13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 MRPL9Q9BYD2 267 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 NRDE2Q9H7Z3 1164 aa13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 AGPAT5Q9NUQ2 364 aa13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 TBC1D13Q9NVG8 400 aa13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 DNAJB4Q9UDY4 337 aa13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 CDH22Q9UJ99 828 aa13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 USP15Q9Y4E8 981 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-208ENST00000567843 C5orf42Q9H799 3197 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 C19orf67A6NJJ6 358 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 INO80B-WBP1J3KQ70 363 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 USO1O60763 962 aaKnown RBP13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 MED24O75448 989 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 POMCP01189 267 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 TECP42680 631 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 GNL2Q13823 731 aaKnown RBP13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 AGMOQ6ZNB7 445 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 CDR2LQ86X02 465 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 ZNF280BQ86YH2 543 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 EXOC8Q8IYI6 725 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 FAM184AQ8NB25 1140 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 SMRP1Q8NCR6 262 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 TMEM169Q96HH4 297 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 RPGRIP1Q96KN7 1286 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 APOL6Q9BWW8 343 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 GPRC5CQ9NQ84 441 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 PRKAG3Q9UGI9 489 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 MUTYHQ9UIF7 546 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 LZTS1Q9Y250 596 aa13.61□□□□□ -0.23
GTF3C1-208ENST00000567843 ASAP2O43150 1006 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 TSPAN1O60635 241 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 ZNF623O75123 536 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 DDHD2O94830 711 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 ERLIN2O94905 339 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 EYA4O95677 639 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 CXCL14O95715 111 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 GALTP07902 379 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 SPATA31C1P0DKV0 1188 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 SKIP12755 728 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 GLRA2P23416 452 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 SP100P23497 879 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 SLC11A1P49279 550 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 RARRES1P49788 294 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms