RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 TOP1MTQ969P6 601 aa19.05■□□□□ 0.64
COMMD4-220ENST00000567720 DRC1Q96MC2 740 aa19.05■□□□□ 0.64
COMMD4-220ENST00000567720 REEP2Q9BRK0 252 aa19.05■□□□□ 0.64
COMMD4-220ENST00000567720 TIPINQ9BVW5 301 aa19.05■□□□□ 0.64
COMMD4-220ENST00000567720 INO80BQ9C086 356 aaPredicted RBP19.05■□□□□ 0.64
COMMD4-220ENST00000567720 RGS18Q9NS28 235 aa19.05■□□□□ 0.64
COMMD4-220ENST00000567720 PIN4Q9Y237 131 aaKnown RBP19.05■□□□□ 0.64
COMMD4-220ENST00000567720 LCHNA4D1U4 455 aa19.04■□□□□ 0.64
COMMD4-220ENST00000567720 C9IYK1 514 aa19.04■□□□□ 0.64
COMMD4-220ENST00000567720 TSPAN1O60635 241 aa19.04■□□□□ 0.64
COMMD4-220ENST00000567720 ARHGEF15O94989 841 aa19.04■□□□□ 0.64
COMMD4-220ENST00000567720 EDN1P05305 212 aa19.04■□□□□ 0.64
COMMD4-220ENST00000567720 RAB30Q15771 203 aa19.04■□□□□ 0.64
COMMD4-220ENST00000567720 CRIPAKQ8N1N5 446 aa19.04■□□□□ 0.64
COMMD4-220ENST00000567720 PANK2Q9BZ23 570 aa19.04■□□□□ 0.64
COMMD4-220ENST00000567720 SCAND2PQ9GZW5 306 aaPredicted RBP19.04■□□□□ 0.64
COMMD4-220ENST00000567720 CCDC113Q9H0I3 377 aa19.04■□□□□ 0.64
COMMD4-220ENST00000567720 RC3H2Q9HBD1 1191 aaKnown RBP19.04■□□□□ 0.64
COMMD4-220ENST00000567720 RBM19Q9Y4C8 960 aaKnown RBP19.04■□□□□ 0.64
COMMD4-220ENST00000567720 PCDHA11Q9Y5I1 949 aa19.04■□□□□ 0.64
COMMD4-220ENST00000567720 MYO9BQ13459 2157 aa19.03■□□□□ 0.64
COMMD4-220ENST00000567720 INO80B-WBP1J3KQ70 363 aa19.03■□□□□ 0.64
COMMD4-220ENST00000567720 TLL1O43897 1013 aa19.03■□□□□ 0.64
COMMD4-220ENST00000567720 UPP2O95045 317 aa19.03■□□□□ 0.64
COMMD4-220ENST00000567720 SARSP49591 514 aaKnown RBP19.03■□□□□ 0.64
COMMD4-220ENST00000567720 PPP2R5AQ15172 486 aa19.03■□□□□ 0.64
COMMD4-220ENST00000567720 TIFAQ96CG3 184 aa19.03■□□□□ 0.64
COMMD4-220ENST00000567720 IFT74Q96LB3 600 aa19.03■□□□□ 0.64
COMMD4-220ENST00000567720 NKX2-4Q9H2Z4 354 aa19.03■□□□□ 0.64
COMMD4-220ENST00000567720 C1orf112Q9NSG2 853 aa19.03■□□□□ 0.64
COMMD4-220ENST00000567720 TDRD15B5MCY1 1934 aaKnown RBP19.03■□□□□ 0.64
COMMD4-220ENST00000567720 B4GALT5O43286 388 aa19.02■□□□□ 0.64
COMMD4-220ENST00000567720 ERLIN2O94905 339 aa19.02■□□□□ 0.64
COMMD4-220ENST00000567720 CA3P07451 260 aa19.02■□□□□ 0.64
COMMD4-220ENST00000567720 IBSPP21815 317 aaPredicted RBP19.02■□□□□ 0.64
COMMD4-220ENST00000567720 NPTX2P47972 431 aa19.02■□□□□ 0.64
COMMD4-220ENST00000567720 PEX3P56589 373 aa19.02■□□□□ 0.64
COMMD4-220ENST00000567720 HTRA4P83105 476 aaPredicted RBP19.02■□□□□ 0.64
COMMD4-220ENST00000567720 DMP1Q13316 513 aaPredicted RBP19.02■□□□□ 0.64
COMMD4-220ENST00000567720 FAM43BQ6ZT52 329 aaPredicted RBP19.02■□□□□ 0.64
COMMD4-220ENST00000567720 SLC24A5Q71RS6 500 aa19.02■□□□□ 0.64
COMMD4-220ENST00000567720 NPAS4Q8IUM7 802 aa19.02■□□□□ 0.64
COMMD4-220ENST00000567720 ZBTB8OSQ8IWT0 167 aa19.02■□□□□ 0.64
COMMD4-220ENST00000567720 DEPTORQ8TB45 409 aa19.02■□□□□ 0.64
COMMD4-220ENST00000567720 DHX58Q96C10 678 aa19.02■□□□□ 0.64
COMMD4-220ENST00000567720 TTYH1Q9H313 450 aaPredicted RBP19.02■□□□□ 0.64
COMMD4-220ENST00000567720 ODF2LQ9ULJ1 636 aa19.02■□□□□ 0.64
COMMD4-220ENST00000567720 PHLPP2Q6ZVD8 1323 aa19.01■□□□□ 0.63
COMMD4-220ENST00000567720 CNTNAP2Q9UHC6 1331 aa19.01■□□□□ 0.63
COMMD4-220ENST00000567720 PDCD11Q14690 1871 aaKnown RBP19.01■□□□□ 0.63
COMMD4-220ENST00000567720 TRIP11Q15643 1979 aa19.01■□□□□ 0.63
COMMD4-220ENST00000567720 MYMKA6NI61 221 aa19.01■□□□□ 0.63
COMMD4-220ENST00000567720 SFI1A8K8P3 1242 aa19.01■□□□□ 0.63
COMMD4-220ENST00000567720 ATF7P17544 494 aaPredicted RBP19.01■□□□□ 0.63
COMMD4-220ENST00000567720 HOXA11P31270 313 aaPredicted RBP19.01■□□□□ 0.63
COMMD4-220ENST00000567720 ZNF131P52739 623 aa19.01■□□□□ 0.63
COMMD4-220ENST00000567720 GIT2Q14161 759 aa19.01■□□□□ 0.63
COMMD4-220ENST00000567720 PCBP1Q15365 356 aaKnown RBP eCLIP19.01■□□□□ 0.63
COMMD4-220ENST00000567720 PPP4R3CPQ6ZMV5 832 aa19.01■□□□□ 0.63
COMMD4-220ENST00000567720 SPRED2Q7Z698 418 aa19.01■□□□□ 0.63
COMMD4-220ENST00000567720 SP7Q8TDD2 431 aaPredicted RBP19.01■□□□□ 0.63
COMMD4-220ENST00000567720 CPB2Q96IY4 423 aa19.01■□□□□ 0.63
COMMD4-220ENST00000567720 ZBED2Q9BTP6 218 aa19.01■□□□□ 0.63
COMMD4-220ENST00000567720 C2orf40Q9H1Z8 148 aa19.01■□□□□ 0.63
COMMD4-220ENST00000567720 CHST12Q9NRB3 414 aa19.01■□□□□ 0.63
COMMD4-220ENST00000567720 ARHGAP28Q9P2N2 729 aa19.01■□□□□ 0.63
COMMD4-220ENST00000567720 MSRAQ9UJ68 235 aa19.01■□□□□ 0.63
COMMD4-220ENST00000567720 CITO14578 2027 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 TTLL13PA6NNM8 815 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 PRKCBP05771 671 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 PLS3P13797 630 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 PFKFB1P16118 471 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 ZSCAN20P17040 1043 aaPredicted RBP19■□□□□ 0.63
COMMD4-220ENST00000567720 ARF4P18085 180 aaPredicted RBP19■□□□□ 0.63
COMMD4-220ENST00000567720 GATMP50440 423 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 ADALQ6DHV7 355 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 TWF2Q6IBS0 349 aaKnown RBP19■□□□□ 0.63
COMMD4-220ENST00000567720 GPR153Q6NV75 609 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 Q7L0L9 218 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 TAS1R3Q7RTX0 852 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 RAD9AQ99638 391 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 FZD8Q9H461 694 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 C17orf75Q9HAS0 396 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 PRMT7Q9NVM4 692 aaPredicted RBP19■□□□□ 0.63
COMMD4-220ENST00000567720 DACT1Q9NYF0 836 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 FAM13BQ9NYF5 915 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 CHMP5Q9NZZ3 219 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 PLXNA4Q9HCM2 1894 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 EYSQ5T1H1 3165 aa19■□□□□ 0.63
COMMD4-220ENST00000567720 TMEM265A0A087WTH1 108 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 CCDC169A6NNP5 214 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 POLR2DO15514 142 aaKnown RBP18.99■□□□□ 0.63
COMMD4-220ENST00000567720 KRT18P05783 430 aaKnown RBP18.99■□□□□ 0.63
COMMD4-220ENST00000567720 FAM189BP81408 668 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 FAM187BQ17R55 369 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 UBXN11Q5T124 520 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 PPP2R2DQ66LE6 453 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 SV2BQ7L1I2 683 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 DYMQ7RTS9 669 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 ZNF598Q86UK7 904 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms