RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 YEATS2Q9ULM3 1422 aa11.32□□□□□ -0.6
NIFKP4-201ENST00000567275 NCANO14594 1321 aa11.32□□□□□ -0.6
NIFKP4-201ENST00000567275 ATP10AO60312 1499 aa11.32□□□□□ -0.6
NIFKP4-201ENST00000567275 HECW1Q76N89 1606 aa11.31□□□□□ -0.6
NIFKP4-201ENST00000567275 CDK13Q14004 1512 aaKnown RBP11.31□□□□□ -0.6
NIFKP4-201ENST00000567275 CPEP16870 476 aa11.31□□□□□ -0.6
NIFKP4-201ENST00000567275 ID4P47928 161 aa11.31□□□□□ -0.6
NIFKP4-201ENST00000567275 FRMD7Q6ZUT3 714 aa11.31□□□□□ -0.6
NIFKP4-201ENST00000567275 KRT26Q7Z3Y9 468 aa11.31□□□□□ -0.6
NIFKP4-201ENST00000567275 HDGFL2Q7Z4V5 671 aaPredicted RBP11.31□□□□□ -0.6
NIFKP4-201ENST00000567275 OR14K1Q8NGZ2 314 aa11.31□□□□□ -0.6
NIFKP4-201ENST00000567275 GFM2Q969S9 779 aaKnown RBP11.31□□□□□ -0.6
NIFKP4-201ENST00000567275 GNRHR2Q96P88 292 aa11.31□□□□□ -0.6
NIFKP4-201ENST00000567275 POLR3BQ9NW08 1133 aaPredicted RBP11.31□□□□□ -0.6
NIFKP4-201ENST00000567275 OAZ3Q9UMX2 235 aa11.31□□□□□ -0.6
NIFKP4-201ENST00000567275 NOC2LQ9Y3T9 749 aaKnown RBP11.31□□□□□ -0.6
NIFKP4-201ENST00000567275 C9orf84Q5VXU9 1444 aa11.31□□□□□ -0.6
NIFKP4-201ENST00000567275 RIMS1Q86UR5 1692 aaKnown RBP11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 TROQ12816 1431 aaPredicted RBP11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 LCHNA4D1U4 455 aa11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 ELL2O00472 640 aaPredicted RBP11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 GPR42O15529 346 aa11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 KDM1AO60341 852 aa11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 ULK1O75385 1050 aa11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 CR2P20023 1033 aa11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 PRRT2Q7Z6L0 340 aaPredicted RBP11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 TAX1BP1Q86VP1 789 aa11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 CHST13Q8NET6 341 aa11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 SAMD11Q96NU1 681 aa11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 NOL10Q9BSC4 688 aaKnown RBP11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 PITHD1Q9GZP4 211 aaPredicted RBP11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 KCNG1Q9UIX4 513 aa11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 ZNF518AQ6AHZ1 1483 aa11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 ARHGEF12Q9NZN5 1544 aa11.3□□□□□ -0.6
NIFKP4-201ENST00000567275 CLIP1P30622 1438 aa11.29□□□□□ -0.6
NIFKP4-201ENST00000567275 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.29□□□□□ -0.6
NIFKP4-201ENST00000567275 BRINP1O60477 761 aa11.29□□□□□ -0.6
NIFKP4-201ENST00000567275 CDC14BO60729 498 aa11.29□□□□□ -0.6
NIFKP4-201ENST00000567275 PCDH8O95206 1070 aa11.29□□□□□ -0.6
NIFKP4-201ENST00000567275 VIL1P09327 827 aaKnown RBP11.29□□□□□ -0.6
NIFKP4-201ENST00000567275 LPPQ93052 612 aa11.29□□□□□ -0.6
NIFKP4-201ENST00000567275 WDR92Q96MX6 357 aa11.29□□□□□ -0.6
NIFKP4-201ENST00000567275 DPYSL5Q9BPU6 564 aa11.29□□□□□ -0.6
NIFKP4-201ENST00000567275 SMPD4Q9NXE4 827 aa11.29□□□□□ -0.6
NIFKP4-201ENST00000567275 DNAI1Q9UI46 699 aa11.29□□□□□ -0.6
NIFKP4-201ENST00000567275 ARHGAP35Q9NRY4 1499 aa11.29□□□□□ -0.6
NIFKP4-201ENST00000567275 KIF14Q15058 1648 aa11.28□□□□□ -0.6
NIFKP4-201ENST00000567275 A0A0A6YYJ9 748 aa11.28□□□□□ -0.6
NIFKP4-201ENST00000567275 OPHN1O60890 802 aa11.28□□□□□ -0.6
NIFKP4-201ENST00000567275 SPATS1Q496A3 300 aa11.28□□□□□ -0.6
NIFKP4-201ENST00000567275 RASSF3Q86WH2 238 aa11.28□□□□□ -0.6
NIFKP4-201ENST00000567275 AFAP1L2Q8N4X5 818 aa11.28□□□□□ -0.6
NIFKP4-201ENST00000567275 GCDHQ92947 438 aaPredicted RBP11.28□□□□□ -0.6
NIFKP4-201ENST00000567275 HIST1H2AHQ96KK5 128 aa11.28□□□□□ -0.6
NIFKP4-201ENST00000567275 HIST1H2AJQ99878 128 aa11.28□□□□□ -0.6
NIFKP4-201ENST00000567275 CTDP1Q9Y5B0 961 aaPredicted RBP11.28□□□□□ -0.6
NIFKP4-201ENST00000567275 MYPNQ86TC9 1320 aa11.28□□□□□ -0.6
NIFKP4-201ENST00000567275 NFKB2Q00653 900 aa11.27□□□□□ -0.61
NIFKP4-201ENST00000567275 ZBTB41Q5SVQ8 909 aa11.27□□□□□ -0.61
NIFKP4-201ENST00000567275 LCE1DQ5T752 114 aa11.27□□□□□ -0.61
NIFKP4-201ENST00000567275 CXorf67Q86X51 503 aaPredicted RBP11.27□□□□□ -0.61
NIFKP4-201ENST00000567275 NKD2Q969F2 451 aaPredicted RBP11.27□□□□□ -0.61
NIFKP4-201ENST00000567275 HAPLN2Q9GZV7 340 aa11.27□□□□□ -0.61
NIFKP4-201ENST00000567275 KDM5CP41229 1560 aa11.27□□□□□ -0.61
NIFKP4-201ENST00000567275 REREQ9P2R6 1566 aa11.27□□□□□ -0.61
NIFKP4-201ENST00000567275 MYO5CQ9NQX4 1742 aa11.26□□□□□ -0.61
NIFKP4-201ENST00000567275 SESN3P58005 492 aa11.26□□□□□ -0.61
NIFKP4-201ENST00000567275 EFEMP1Q12805 493 aa11.26□□□□□ -0.61
NIFKP4-201ENST00000567275 RNF187Q5TA31 235 aaPredicted RBP11.26□□□□□ -0.61
NIFKP4-201ENST00000567275 TTC9BQ8N6N2 239 aa11.26□□□□□ -0.61
NIFKP4-201ENST00000567275 ANO3Q9BYT9 981 aa11.26□□□□□ -0.61
NIFKP4-201ENST00000567275 SPC25Q9HBM1 224 aa11.26□□□□□ -0.61
NIFKP4-201ENST00000567275 ST6GALNAC2Q9UJ37 374 aa11.26□□□□□ -0.61
NIFKP4-201ENST00000567275 RBM8AQ9Y5S9 174 aaKnown RBP11.26□□□□□ -0.61
NIFKP4-201ENST00000567275 MLH3Q9UHC1 1453 aa11.25□□□□□ -0.61
NIFKP4-201ENST00000567275 DAPK3O43293 454 aa11.25□□□□□ -0.61
NIFKP4-201ENST00000567275 TCTN3Q6NUS6 607 aa11.25□□□□□ -0.61
NIFKP4-201ENST00000567275 SLC7A6OSQ96CW6 309 aaPredicted RBP11.25□□□□□ -0.61
NIFKP4-201ENST00000567275 USP18Q9UMW8 372 aa11.25□□□□□ -0.61
NIFKP4-201ENST00000567275 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.25□□□□□ -0.61
NIFKP4-201ENST00000567275 FER1L4A9Z1Z3 1794 aa11.25□□□□□ -0.61
NIFKP4-201ENST00000567275 SIGLEC1Q9BZZ2 1709 aa11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 MATN2O00339 956 aa11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 DNAJC6O75061 913 aa11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 BUD31P41223 144 aaPredicted RBP11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 MAGEA10P43363 369 aaPredicted RBP11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 TMPRSS15P98073 1019 aa11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 ATP2C1P98194 919 aaPredicted RBP11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 HGFACQ04756 655 aa11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 STAT4Q14765 748 aa11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 CDYL2Q8N8U2 506 aa11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 CFHR4Q92496 578 aa11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 C8orf49Q96NF6 230 aa11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 ZFR2Q9UPR6 939 aaKnown RBP11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 PCDHB6Q9Y5E3 794 aa11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 SBNO2Q9Y2G9 1366 aa11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 CCDC18Q5T9S5 1454 aa11.24□□□□□ -0.61
NIFKP4-201ENST00000567275 PRSS38A1L453 326 aa11.23□□□□□ -0.61
NIFKP4-201ENST00000567275 HSPA2P54652 639 aa11.23□□□□□ -0.61
NIFKP4-201ENST00000567275 ICAM4Q14773 271 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms