RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 MCPH1Q8NEM0 835 aa25.35■■□□□ 1.65
LINC00543-201ENST00000567234 CEP170P1Q96L14 293 aa25.35■■□□□ 1.65
LINC00543-201ENST00000567234 GEMIN8Q9NWZ8 242 aaKnown RBP25.35■■□□□ 1.65
LINC00543-201ENST00000567234 GCNT4Q9P109 453 aa25.35■■□□□ 1.65
LINC00543-201ENST00000567234 IGSF9BQ9UPX0 1349 aa25.34■■□□□ 1.65
LINC00543-201ENST00000567234 SEC31AO94979 1220 aaKnown RBP25.34■■□□□ 1.65
LINC00543-201ENST00000567234 RAPGEF1Q13905 1077 aa25.34■■□□□ 1.65
LINC00543-201ENST00000567234 INTS8Q75QN2 995 aaKnown RBP25.34■■□□□ 1.65
LINC00543-201ENST00000567234 SIX2Q9NPC8 291 aa25.34■■□□□ 1.65
LINC00543-201ENST00000567234 PDLIM7Q9NR12 457 aa25.34■■□□□ 1.65
LINC00543-201ENST00000567234 ACTN1P12814 892 aa25.33■■□□□ 1.65
LINC00543-201ENST00000567234 ANXA13P27216 316 aa25.33■■□□□ 1.65
LINC00543-201ENST00000567234 ABCD1P33897 745 aa25.33■■□□□ 1.65
LINC00543-201ENST00000567234 MCCD1P59942 119 aaPredicted RBP25.33■■□□□ 1.65
LINC00543-201ENST00000567234 AMPD2Q01433 879 aa25.33■■□□□ 1.65
LINC00543-201ENST00000567234 BFSP1Q12934 665 aa25.33■■□□□ 1.65
LINC00543-201ENST00000567234 DMP1Q13316 513 aaPredicted RBP25.33■■□□□ 1.65
LINC00543-201ENST00000567234 WHAMMP3Q1A5X7 153 aa25.33■■□□□ 1.65
LINC00543-201ENST00000567234 XKR3Q5GH77 459 aa25.33■■□□□ 1.65
LINC00543-201ENST00000567234 SRGAP1Q7Z6B7 1085 aa25.33■■□□□ 1.65
LINC00543-201ENST00000567234 NCAPG2Q86XI2 1143 aa25.33■■□□□ 1.65
LINC00543-201ENST00000567234 CCDC60Q8IWA6 550 aaPredicted RBP25.33■■□□□ 1.65
LINC00543-201ENST00000567234 FAM133AQ8N9E0 248 aa25.33■■□□□ 1.65
LINC00543-201ENST00000567234 SPAG5Q96R06 1193 aa25.33■■□□□ 1.65
LINC00543-201ENST00000567234 SH2D3AQ9BRG2 576 aa25.33■■□□□ 1.65
LINC00543-201ENST00000567234 GPRC5CQ9NQ84 441 aa25.33■■□□□ 1.65
LINC00543-201ENST00000567234 KCNG1Q9UIX4 513 aa25.33■■□□□ 1.65
LINC00543-201ENST00000567234 ANO9A1A5B4 782 aa25.33■■□□□ 1.64
LINC00543-201ENST00000567234 CNMDO75829 334 aa25.33■■□□□ 1.64
LINC00543-201ENST00000567234 MAGEA1P43355 309 aa25.33■■□□□ 1.64
LINC00543-201ENST00000567234 APBA1Q02410 837 aa25.33■■□□□ 1.64
LINC00543-201ENST00000567234 KLHL30Q0D2K2 578 aa25.33■■□□□ 1.64
LINC00543-201ENST00000567234 SECISBP2LQ93073 1101 aaKnown RBP25.33■■□□□ 1.64
LINC00543-201ENST00000567234 FAM107BQ9H098 131 aa25.33■■□□□ 1.64
LINC00543-201ENST00000567234 SLC16A4O15374 487 aa25.32■■□□□ 1.64
LINC00543-201ENST00000567234 KRT13P13646 458 aa25.32■■□□□ 1.64
LINC00543-201ENST00000567234 PRKCIP41743 596 aa25.32■■□□□ 1.64
LINC00543-201ENST00000567234 SP2Q02086 613 aa25.32■■□□□ 1.64
LINC00543-201ENST00000567234 PRKCEQ02156 737 aa25.32■■□□□ 1.64
LINC00543-201ENST00000567234 TMEM161BQ8NDZ6 487 aa25.32■■□□□ 1.64
LINC00543-201ENST00000567234 TRIM58Q8NG06 486 aa25.32■■□□□ 1.64
LINC00543-201ENST00000567234 SLC10A4Q96EP9 437 aa25.32■■□□□ 1.64
LINC00543-201ENST00000567234 GPBP1L1Q9HC44 474 aaPredicted RBP25.32■■□□□ 1.64
LINC00543-201ENST00000567234 TFR2Q9UP52 801 aa25.32■■□□□ 1.64
LINC00543-201ENST00000567234 MAFBQ9Y5Q3 323 aaPredicted RBP25.32■■□□□ 1.64
LINC00543-201ENST00000567234 LRRC37A2A6NM11 1700 aa25.31■■□□□ 1.64
LINC00543-201ENST00000567234 TGFB3P10600 412 aa25.31■■□□□ 1.64
LINC00543-201ENST00000567234 OSBPP22059 807 aa25.31■■□□□ 1.64
LINC00543-201ENST00000567234 NPTX2P47972 431 aa25.31■■□□□ 1.64
LINC00543-201ENST00000567234 JAM2P57087 298 aa25.31■■□□□ 1.64
LINC00543-201ENST00000567234 MOGSQ13724 837 aa25.31■■□□□ 1.64
LINC00543-201ENST00000567234 SLC18A3Q16572 532 aa25.31■■□□□ 1.64
LINC00543-201ENST00000567234 PAPD7Q5XG87 772 aaKnown RBP25.31■■□□□ 1.64
LINC00543-201ENST00000567234 ICE2Q659A1 982 aa25.31■■□□□ 1.64
LINC00543-201ENST00000567234 IRF2BP2Q7Z5L9 587 aa25.31■■□□□ 1.64
LINC00543-201ENST00000567234 FMNL3Q8IVF7 1028 aa25.31■■□□□ 1.64
LINC00543-201ENST00000567234 XXYLT1Q8NBI6 393 aa25.31■■□□□ 1.64
LINC00543-201ENST00000567234 MPHOSPH6Q99547 160 aaKnown RBP25.31■■□□□ 1.64
LINC00543-201ENST00000567234 MED4Q9NPJ6 270 aa25.31■■□□□ 1.64
LINC00543-201ENST00000567234 CYP26B1Q9NR63 512 aa25.31■■□□□ 1.64
LINC00543-201ENST00000567234 SOWAHBA6NEL2 793 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 P4HA2O15460 535 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 N4BP1O75113 896 aaKnown RBP25.3■■□□□ 1.64
LINC00543-201ENST00000567234 MKRN3Q13064 507 aaKnown RBP25.3■■□□□ 1.64
LINC00543-201ENST00000567234 MAP4K3Q8IVH8 894 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 TBX20Q9UMR3 447 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 SYNGAP1Q96PV0 1343 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 MYH10P35580 1976 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 UNCXA6NJT0 531 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 H0YCG3 227 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 SCP2P22307 547 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 LMAN1P49257 510 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 GFPT1Q06210 699 aaPredicted RBP25.3■■□□□ 1.64
LINC00543-201ENST00000567234 C10orf76Q5T2E6 689 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 CYFIP1Q7L576 1253 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 TRAPPC11Q7Z392 1133 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 C2orf69Q8N8R5 385 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 FAM71BQ8TC56 605 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 PAGR1Q9BTK6 254 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 ATP6V0A4Q9HBG4 840 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 KMT5AQ9NQR1 393 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 HSPBP1Q9NZL4 362 aa25.3■■□□□ 1.64
LINC00543-201ENST00000567234 SEPT9Q9UHD8 586 aaPredicted RBP25.3■■□□□ 1.64
LINC00543-201ENST00000567234 IGKV6D-21A0A0A0MT36 114 aa25.29■■□□□ 1.64
LINC00543-201ENST00000567234 TACC1O75410 805 aa25.29■■□□□ 1.64
LINC00543-201ENST00000567234 RFX1P22670 979 aa25.29■■□□□ 1.64
LINC00543-201ENST00000567234 NEDD9Q14511 834 aa25.29■■□□□ 1.64
LINC00543-201ENST00000567234 RNF10Q8N5U6 811 aaKnown RBP25.29■■□□□ 1.64
LINC00543-201ENST00000567234 PPM1EQ8WY54 764 aa25.29■■□□□ 1.64
LINC00543-201ENST00000567234 KCNN1Q92952 543 aa25.29■■□□□ 1.64
LINC00543-201ENST00000567234 ZNF302Q9NR11 478 aa25.29■■□□□ 1.64
LINC00543-201ENST00000567234 DUSP10Q9Y6W6 482 aa25.29■■□□□ 1.64
LINC00543-201ENST00000567234 CCDC169A6NNP5 214 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 KIF3CO14782 793 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 PMM2O15305 246 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 FKBP1BP68106 108 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 FSTL1Q12841 308 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 BEND6Q5SZJ8 279 aaPredicted RBP25.28■■□□□ 1.64
LINC00543-201ENST00000567234 SEPT14Q6ZU15 432 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 TRMT1LQ7Z2T5 733 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms