RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 FGFR4P22455 802 aa18.93■□□□□ 0.62
CLK3-217ENST00000566126 RPS9P46781 194 aaKnown RBP18.93■□□□□ 0.62
CLK3-217ENST00000566126 CLCN3P51790 818 aa18.93■□□□□ 0.62
CLK3-217ENST00000566126 UNQ6494/PRO21346Q6UXR6 183 aa18.93■□□□□ 0.62
CLK3-217ENST00000566126 CYB5R4Q7L1T6 521 aa18.93■□□□□ 0.62
CLK3-217ENST00000566126 CCDC60Q8IWA6 550 aaPredicted RBP18.93■□□□□ 0.62
CLK3-217ENST00000566126 METTL13Q8N6R0 699 aa18.93■□□□□ 0.62
CLK3-217ENST00000566126 MAP4K1Q92918 833 aa18.93■□□□□ 0.62
CLK3-217ENST00000566126 SDF4Q9BRK5 362 aa18.93■□□□□ 0.62
CLK3-217ENST00000566126 NT5C3AQ9H0P0 336 aa18.93■□□□□ 0.62
CLK3-217ENST00000566126 MYH9P35579 1960 aaKnown RBP18.92■□□□□ 0.62
CLK3-217ENST00000566126 MEIS3P2A8K0S8 358 aa18.92■□□□□ 0.62
CLK3-217ENST00000566126 C2CD2LO14523 706 aa18.92■□□□□ 0.62
CLK3-217ENST00000566126 CCNE2O96020 404 aa18.92■□□□□ 0.62
CLK3-217ENST00000566126 GLUD1P00367 558 aa18.92■□□□□ 0.62
CLK3-217ENST00000566126 MTAPQ13126 283 aa18.92■□□□□ 0.62
CLK3-217ENST00000566126 LONRF3Q496Y0 759 aa18.92■□□□□ 0.62
CLK3-217ENST00000566126 C20orf194Q5TEA3 1177 aa18.92■□□□□ 0.62
CLK3-217ENST00000566126 IL31Q6EBC2 164 aa18.92■□□□□ 0.62
CLK3-217ENST00000566126 ABHD15Q6UXT9 468 aa18.92■□□□□ 0.62
CLK3-217ENST00000566126 ZNF280BQ86YH2 543 aa18.92■□□□□ 0.62
CLK3-217ENST00000566126 ZNF668Q96K58 619 aaPredicted RBP18.92■□□□□ 0.62
CLK3-217ENST00000566126 GBP3Q9H0R5 595 aa18.92■□□□□ 0.62
CLK3-217ENST00000566126 PIDD1Q9HB75 910 aa18.92■□□□□ 0.62
CLK3-217ENST00000566126 SENP2Q9HC62 589 aa18.92■□□□□ 0.62
CLK3-217ENST00000566126 DPP7Q9UHL4 492 aa18.92■□□□□ 0.62
CLK3-217ENST00000566126 BACH1O14867 736 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 ADH1AP07327 375 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 SPATA31D3P0C874 917 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 PHKA2P46019 1235 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 AK2P54819 239 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 TROAPQ12815 778 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 NOMO2Q5JPE7 1267 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 LRSAM1Q6UWE0 723 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 PRR23BQ6ZRT6 265 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 SPATA31D4Q6ZUB0 917 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 TICAM2Q86XR7 235 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 LINC01465Q8N7H1 131 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 RSPH1Q8WYR4 309 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 RPS6KC1Q96S38 1066 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 MXRA8Q9BRK3 442 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 FAM217BQ9NTX9 383 aaPredicted RBP18.91■□□□□ 0.62
CLK3-217ENST00000566126 DACT1Q9NYF0 836 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 STK39Q9UEW8 545 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 INPP5FQ9Y2H2 1132 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 AKAP13Q12802 2813 aa18.91■□□□□ 0.62
CLK3-217ENST00000566126 SMG1Q96Q15 3661 aaKnown RBP18.9■□□□□ 0.62
CLK3-217ENST00000566126 SHISA7A6NL88 538 aa18.9■□□□□ 0.62
CLK3-217ENST00000566126 CCER2I3L3R5 266 aa18.9■□□□□ 0.62
CLK3-217ENST00000566126 DARSP14868 501 aaKnown RBP18.9■□□□□ 0.62
CLK3-217ENST00000566126 RNASELQ05823 741 aaKnown RBP18.9■□□□□ 0.62
CLK3-217ENST00000566126 UBE2SQ16763 222 aa18.9■□□□□ 0.62
CLK3-217ENST00000566126 FAM160B1Q5W0V3 765 aa18.9■□□□□ 0.62
CLK3-217ENST00000566126 PDXDC2PQ6P474 469 aa18.9■□□□□ 0.62
CLK3-217ENST00000566126 TAS1R1Q7RTX1 841 aa18.9■□□□□ 0.62
CLK3-217ENST00000566126 PHKBQ93100 1093 aa18.9■□□□□ 0.62
CLK3-217ENST00000566126 CNNM2Q9H8M5 875 aa18.9■□□□□ 0.62
CLK3-217ENST00000566126 AKT3Q9Y243 479 aa18.9■□□□□ 0.62
CLK3-217ENST00000566126 ZFP37Q9Y6Q3 630 aaPredicted RBP18.9■□□□□ 0.62
CLK3-217ENST00000566126 DMXL2Q8TDJ6 3036 aa18.9■□□□□ 0.62
CLK3-217ENST00000566126 GREB1Q4ZG55 1949 aa18.9■□□□□ 0.62
CLK3-217ENST00000566126 ASH1LQ9NR48 2969 aaKnown RBP18.9■□□□□ 0.62
CLK3-217ENST00000566126 OFD1O75665 1012 aa18.89■□□□□ 0.61
CLK3-217ENST00000566126 DDHD2O94830 711 aa18.89■□□□□ 0.61
CLK3-217ENST00000566126 SOD2P04179 222 aa18.89■□□□□ 0.61
CLK3-217ENST00000566126 LIMK1P53667 647 aa18.89■□□□□ 0.61
CLK3-217ENST00000566126 NRLP54845 237 aa18.89■□□□□ 0.61
CLK3-217ENST00000566126 ELMSAN1Q6PJG2 1045 aa18.89■□□□□ 0.61
CLK3-217ENST00000566126 GLB1LQ6UWU2 654 aa18.89■□□□□ 0.61
CLK3-217ENST00000566126 TPRG1Q6ZUI0 275 aa18.89■□□□□ 0.61
CLK3-217ENST00000566126 HDAC7Q8WUI4 952 aa18.89■□□□□ 0.61
CLK3-217ENST00000566126 PRKD2Q9BZL6 878 aa18.89■□□□□ 0.61
CLK3-217ENST00000566126 PSTPIP2Q9H939 334 aa18.89■□□□□ 0.61
CLK3-217ENST00000566126 AGO4Q9HCK5 861 aaKnown RBP18.89■□□□□ 0.61
CLK3-217ENST00000566126 ZNF302Q9NR11 478 aa18.89■□□□□ 0.61
CLK3-217ENST00000566126 PCDHA6Q9UN73 950 aa18.89■□□□□ 0.61
CLK3-217ENST00000566126 PCDHA8Q9Y5H6 950 aa18.89■□□□□ 0.61
CLK3-217ENST00000566126 ITPR1Q14643 2758 aa18.89■□□□□ 0.61
CLK3-217ENST00000566126 NCAM2O15394 837 aa18.88■□□□□ 0.61
CLK3-217ENST00000566126 CSDE1O75534 798 aaKnown RBP18.88■□□□□ 0.61
CLK3-217ENST00000566126 URODP06132 367 aa18.88■□□□□ 0.61
CLK3-217ENST00000566126 FSHRP23945 695 aa18.88■□□□□ 0.61
CLK3-217ENST00000566126 GPC3P51654 580 aa18.88■□□□□ 0.61
CLK3-217ENST00000566126 MFAP1P55081 439 aaKnown RBP18.88■□□□□ 0.61
CLK3-217ENST00000566126 NELL2Q99435 816 aa18.88■□□□□ 0.61
CLK3-217ENST00000566126 HERC2P3Q9BVR0 1158 aa18.88■□□□□ 0.61
CLK3-217ENST00000566126 TRAIPQ9BWF2 469 aa18.88■□□□□ 0.61
CLK3-217ENST00000566126 TMEM121BQ9BXQ6 578 aaPredicted RBP18.88■□□□□ 0.61
CLK3-217ENST00000566126 RXFP1Q9HBX9 757 aa18.88■□□□□ 0.61
CLK3-217ENST00000566126 ZDHHC7Q9NXF8 308 aa18.88■□□□□ 0.61
CLK3-217ENST00000566126 CDH7Q9ULB5 785 aa18.88■□□□□ 0.61
CLK3-217ENST00000566126 SRRM3A6NNA2 597 aaPredicted RBP18.87■□□□□ 0.61
CLK3-217ENST00000566126 DDX39AO00148 427 aaKnown RBP18.87■□□□□ 0.61
CLK3-217ENST00000566126 LAMA1P25391 3075 aa18.87■□□□□ 0.61
CLK3-217ENST00000566126 PFKPQ01813 784 aa18.87■□□□□ 0.61
CLK3-217ENST00000566126 RING1Q06587 406 aa18.87■□□□□ 0.61
CLK3-217ENST00000566126 SIM2Q14190 667 aaPredicted RBP18.87■□□□□ 0.61
CLK3-217ENST00000566126 IMMTQ16891 758 aaKnown RBP18.87■□□□□ 0.61
CLK3-217ENST00000566126 WDR81Q562E7 1941 aa18.87■□□□□ 0.61
CLK3-217ENST00000566126 SWSAP1Q6NVH7 229 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms