RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 KCNK12Q9HB15 430 aa14.39□□□□□ -0.11
RNF40-208ENST00000565995 C6orf50Q9HD87 102 aa14.39□□□□□ -0.11
RNF40-208ENST00000565995 TCEAL9Q9UHQ7 104 aa14.39□□□□□ -0.11
RNF40-208ENST00000565995 NID2Q14112 1375 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 MSH4O15457 936 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 ZC3H11AO75152 810 aaKnown RBP eCLIP14.38□□□□□ -0.11
RNF40-208ENST00000565995 OFD1O75665 1012 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 GNA11P29992 359 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 RAB27AP51159 221 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 USP11P51784 963 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 TBC1D8BQ0IIM8 1120 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 DRP2Q13474 957 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 ANGPT1Q15389 498 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 LETM2Q2VYF4 491 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 NOMO2Q5JPE7 1267 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 TMC5Q6UXY8 1006 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 CYP26C1Q6V0L0 522 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 ZNF410Q86VK4 478 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 DTWD2Q8NBA8 298 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 RDM1Q8NG50 284 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 NLRP7Q8WX94 980 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 SLC5A5Q92911 643 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 ZNF668Q96K58 619 aaPredicted RBP14.38□□□□□ -0.11
RNF40-208ENST00000565995 KLHL5Q96PQ7 755 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 INO80BQ9C086 356 aaPredicted RBP14.38□□□□□ -0.11
RNF40-208ENST00000565995 WNT16Q9UBV4 365 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 SAMM50Q9Y512 469 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 CEP250Q9BV73 2442 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 TRIP11Q15643 1979 aa14.38□□□□□ -0.11
RNF40-208ENST00000565995 NOTCH4Q99466 2003 aa14.37□□□□□ -0.11
RNF40-208ENST00000565995 GOLGA8AA7E2F4 631 aa14.37□□□□□ -0.11
RNF40-208ENST00000565995 GOLGA8BA8MQT2 603 aa14.37□□□□□ -0.11
RNF40-208ENST00000565995 PRPF3O43395 683 aaKnown RBP14.37□□□□□ -0.11
RNF40-208ENST00000565995 CSDE1O75534 798 aaKnown RBP14.37□□□□□ -0.11
RNF40-208ENST00000565995 EFEMP2O95967 443 aa14.37□□□□□ -0.11
RNF40-208ENST00000565995 C1RP00736 705 aa14.37□□□□□ -0.11
RNF40-208ENST00000565995 SFPQP23246 707 aaKnown RBP eCLIP14.37□□□□□ -0.11
RNF40-208ENST00000565995 ADD1P35611 737 aaKnown RBP14.37□□□□□ -0.11
RNF40-208ENST00000565995 JAK3P52333 1124 aa14.37□□□□□ -0.11
RNF40-208ENST00000565995 UGCGQ16739 394 aa14.37□□□□□ -0.11
RNF40-208ENST00000565995 GLB1LQ6UWU2 654 aa14.37□□□□□ -0.11
RNF40-208ENST00000565995 B3GNT9Q6UX72 402 aa14.37□□□□□ -0.11
RNF40-208ENST00000565995 CCDC149Q6ZUS6 474 aa14.37□□□□□ -0.11
RNF40-208ENST00000565995 MRPL10Q7Z7H8 261 aaKnown RBP14.37□□□□□ -0.11
RNF40-208ENST00000565995 TMEM87AQ8NBN3 555 aa14.37□□□□□ -0.11
RNF40-208ENST00000565995 FLCNQ8NFG4 579 aa14.37□□□□□ -0.11
RNF40-208ENST00000565995 LPPQ93052 612 aa14.37□□□□□ -0.11
RNF40-208ENST00000565995 FAM105AQ9NUU6 356 aa14.37□□□□□ -0.11
RNF40-208ENST00000565995 DNAJB4Q9UDY4 337 aa14.37□□□□□ -0.11
RNF40-208ENST00000565995 A0A087WZ62 844 aa14.36□□□□□ -0.11
RNF40-208ENST00000565995 KLF18A0A0U1RQI7 1052 aa14.36□□□□□ -0.11
RNF40-208ENST00000565995 CCDC196A0A1B0GTZ2 297 aa14.36□□□□□ -0.11
RNF40-208ENST00000565995 MEIS3P2A8K0S8 358 aa14.36□□□□□ -0.11
RNF40-208ENST00000565995 B4GALT3O60512 393 aa14.36□□□□□ -0.11
RNF40-208ENST00000565995 MAFO75444 373 aaPredicted RBP14.36□□□□□ -0.11
RNF40-208ENST00000565995 PSMD10O75832 226 aa14.36□□□□□ -0.11
RNF40-208ENST00000565995 CNPP09543 421 aaKnown RBP14.36□□□□□ -0.11
RNF40-208ENST00000565995 CA8P35219 290 aa14.36□□□□□ -0.11
RNF40-208ENST00000565995 SLC11A1P49279 550 aa14.36□□□□□ -0.11
RNF40-208ENST00000565995 DNM2P50570 870 aa14.36□□□□□ -0.11
RNF40-208ENST00000565995 XKR3Q5GH77 459 aa14.36□□□□□ -0.11
RNF40-208ENST00000565995 TWF2Q6IBS0 349 aaKnown RBP14.36□□□□□ -0.11
RNF40-208ENST00000565995 BICD2Q8TD16 824 aa14.36□□□□□ -0.11
RNF40-208ENST00000565995 NXPE3Q969Y0 559 aa14.36□□□□□ -0.11
RNF40-208ENST00000565995 FDXACB1Q9BRP7 624 aaPredicted RBP14.36□□□□□ -0.11
RNF40-208ENST00000565995 TMEM175Q9BSA9 504 aa14.36□□□□□ -0.11
RNF40-208ENST00000565995 EMILIN2Q9BXX0 1053 aa14.36□□□□□ -0.11
RNF40-208ENST00000565995 ANO2Q9NQ90 1003 aa14.36□□□□□ -0.11
RNF40-208ENST00000565995 KMT2BQ9UMN6 2715 aaPredicted RBP14.35□□□□□ -0.11
RNF40-208ENST00000565995 N4BP1O75113 896 aaKnown RBP14.35□□□□□ -0.11
RNF40-208ENST00000565995 DDHD2O94830 711 aa14.35□□□□□ -0.11
RNF40-208ENST00000565995 ALDH2P05091 517 aa14.35□□□□□ -0.11
RNF40-208ENST00000565995 HMGB1P09429 215 aaKnown RBP14.35□□□□□ -0.11
RNF40-208ENST00000565995 ADCK5Q3MIX3 580 aa14.35□□□□□ -0.11
RNF40-208ENST00000565995 AGMOQ6ZNB7 445 aa14.35□□□□□ -0.11
RNF40-208ENST00000565995 CENPQQ7L2Z9 268 aaPredicted RBP14.35□□□□□ -0.11
RNF40-208ENST00000565995 ZNF280BQ86YH2 543 aa14.35□□□□□ -0.11
RNF40-208ENST00000565995 RASEFQ8IZ41 740 aa14.35□□□□□ -0.11
RNF40-208ENST00000565995 SIX5Q8N196 739 aa14.35□□□□□ -0.11
RNF40-208ENST00000565995 FBXL16Q8N461 479 aa14.35□□□□□ -0.11
RNF40-208ENST00000565995 PGBD4Q96DM1 585 aa14.35□□□□□ -0.11
RNF40-208ENST00000565995 TCEANC2Q96MN5 208 aa14.35□□□□□ -0.11
RNF40-208ENST00000565995 SCLT1Q96NL6 688 aa14.35□□□□□ -0.11
RNF40-208ENST00000565995 UNC45AQ9H3U1 944 aa14.35□□□□□ -0.11
RNF40-208ENST00000565995 IFT122Q9HBG6 1241 aa14.35□□□□□ -0.11
RNF40-208ENST00000565995 KANSL3Q9P2N6 904 aa14.35□□□□□ -0.11
RNF40-208ENST00000565995 EPS15L1Q9UBC2 864 aa14.35□□□□□ -0.11
RNF40-208ENST00000565995 CYP3A7-CYP3A51PA0A087WV96 503 aa14.34□□□□□ -0.11
RNF40-208ENST00000565995 KRBA1A5PL33 1030 aa14.34□□□□□ -0.11
RNF40-208ENST00000565995 GAS7O60861 476 aa14.34□□□□□ -0.11
RNF40-208ENST00000565995 CYP3A7P24462 503 aa14.34□□□□□ -0.11
RNF40-208ENST00000565995 KLRC2P26717 231 aa14.34□□□□□ -0.11
RNF40-208ENST00000565995 RNASELQ05823 741 aaKnown RBP14.34□□□□□ -0.11
RNF40-208ENST00000565995 KRT32Q14532 448 aa14.34□□□□□ -0.11
RNF40-208ENST00000565995 NTRK3Q16288 839 aa14.34□□□□□ -0.11
RNF40-208ENST00000565995 Q4G0T1 1027 aa14.34□□□□□ -0.11
RNF40-208ENST00000565995 LRCH2Q5VUJ6 765 aa14.34□□□□□ -0.11
RNF40-208ENST00000565995 RNF168Q8IYW5 571 aaPredicted RBP14.34□□□□□ -0.11
RNF40-208ENST00000565995 HDAC7Q8WUI4 952 aa14.34□□□□□ -0.11
RNF40-208ENST00000565995 TEKT3Q9BXF9 490 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms