RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 MAP7D2Q96T17 732 aa20.58■□□□□ 0.89
COMMD4-213ENST00000565834 IKZF4Q9H2S9 585 aa20.58■□□□□ 0.89
COMMD4-213ENST00000565834 CETN3O15182 167 aa20.58■□□□□ 0.88
COMMD4-213ENST00000565834 CBFA2T2O43439 604 aa20.58■□□□□ 0.88
COMMD4-213ENST00000565834 NR3C1P04150 777 aa20.58■□□□□ 0.88
COMMD4-213ENST00000565834 ASGR1P07306 291 aa20.58■□□□□ 0.88
COMMD4-213ENST00000565834 SRGAP2CP0DJJ0 459 aa20.58■□□□□ 0.88
COMMD4-213ENST00000565834 UBASH3AP57075 661 aa20.58■□□□□ 0.88
COMMD4-213ENST00000565834 CCDC173Q0VFZ6 552 aa20.58■□□□□ 0.88
COMMD4-213ENST00000565834 ADAM9Q13443 819 aa20.58■□□□□ 0.88
COMMD4-213ENST00000565834 CCSAPQ6IQ19 270 aaPredicted RBP20.58■□□□□ 0.88
COMMD4-213ENST00000565834 RNF149Q8NC42 400 aa20.58■□□□□ 0.88
COMMD4-213ENST00000565834 CNOT6LQ96LI5 555 aaKnown RBP20.58■□□□□ 0.88
COMMD4-213ENST00000565834 CTAGE1Q96RT6 745 aa20.58■□□□□ 0.88
COMMD4-213ENST00000565834 AGPAT3Q9NRZ7 376 aa20.58■□□□□ 0.88
COMMD4-213ENST00000565834 CGNQ9P2M7 1197 aaKnown RBP20.58■□□□□ 0.88
COMMD4-213ENST00000565834 LIMA1Q9UHB6 759 aaKnown RBP20.58■□□□□ 0.88
COMMD4-213ENST00000565834 AKT3Q9Y243 479 aa20.58■□□□□ 0.88
COMMD4-213ENST00000565834 C17orf102A2RUQ5 167 aa20.57■□□□□ 0.88
COMMD4-213ENST00000565834 MBLAC1A4D2B0 266 aaPredicted RBP20.57■□□□□ 0.88
COMMD4-213ENST00000565834 CLIC2O15247 247 aa20.57■□□□□ 0.88
COMMD4-213ENST00000565834 GJB1P08034 283 aa20.57■□□□□ 0.88
COMMD4-213ENST00000565834 GNAT1P11488 350 aa20.57■□□□□ 0.88
COMMD4-213ENST00000565834 EFNA5P52803 228 aa20.57■□□□□ 0.88
COMMD4-213ENST00000565834 STRN3Q13033 797 aa20.57■□□□□ 0.88
COMMD4-213ENST00000565834 KRT31Q15323 416 aa20.57■□□□□ 0.88
COMMD4-213ENST00000565834 NFIL3Q16649 462 aa20.57■□□□□ 0.88
COMMD4-213ENST00000565834 SLC9C1Q4G0N8 1177 aa20.57■□□□□ 0.88
COMMD4-213ENST00000565834 ZBTB8OSQ8IWT0 167 aa20.57■□□□□ 0.88
COMMD4-213ENST00000565834 MRFAP1L1Q96HT8 127 aa20.57■□□□□ 0.88
COMMD4-213ENST00000565834 NLRP4Q96MN2 994 aa20.57■□□□□ 0.88
COMMD4-213ENST00000565834 XPO4Q9C0E2 1151 aaKnown RBP20.57■□□□□ 0.88
COMMD4-213ENST00000565834 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.57■□□□□ 0.88
COMMD4-213ENST00000565834 C2orf40Q9H1Z8 148 aa20.57■□□□□ 0.88
COMMD4-213ENST00000565834 HDAC6Q9UBN7 1215 aa20.57■□□□□ 0.88
COMMD4-213ENST00000565834 PHLPP2Q6ZVD8 1323 aa20.56■□□□□ 0.88
COMMD4-213ENST00000565834 K7ERI5 159 aa20.56■□□□□ 0.88
COMMD4-213ENST00000565834 SNRPFP62306 86 aaKnown RBP20.56■□□□□ 0.88
COMMD4-213ENST00000565834 LHX8Q68G74 356 aa20.56■□□□□ 0.88
COMMD4-213ENST00000565834 CDCA2Q69YH5 1023 aaPredicted RBP20.56■□□□□ 0.88
COMMD4-213ENST00000565834 TAS1R3Q7RTX0 852 aa20.56■□□□□ 0.88
COMMD4-213ENST00000565834 FILIP1Q7Z7B0 1213 aa20.56■□□□□ 0.88
COMMD4-213ENST00000565834 TMEM134Q9H6X4 195 aa20.56■□□□□ 0.88
COMMD4-213ENST00000565834 GNA14O95837 355 aa20.55■□□□□ 0.88
COMMD4-213ENST00000565834 TPM3P06753 285 aa20.55■□□□□ 0.88
COMMD4-213ENST00000565834 HOXC8P31273 242 aa20.55■□□□□ 0.88
COMMD4-213ENST00000565834 ADAM17P78536 824 aa20.55■□□□□ 0.88
COMMD4-213ENST00000565834 NBPF20Q3BBV1 942 aa20.55■□□□□ 0.88
COMMD4-213ENST00000565834 APTXQ7Z2E3 356 aaKnown RBP20.55■□□□□ 0.88
COMMD4-213ENST00000565834 BICD1Q96G01 975 aa20.55■□□□□ 0.88
COMMD4-213ENST00000565834 PDLIM2Q96JY6 352 aa20.55■□□□□ 0.88
COMMD4-213ENST00000565834 SMIM35A0A1B0GVV1 85 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 LRRC10BA6NIK2 292 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 VTNP04004 478 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 HSPA8P11142 646 aaKnown RBP20.54■□□□□ 0.88
COMMD4-213ENST00000565834 CYP2C9P11712 490 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 MTIF2P46199 727 aaKnown RBP20.54■□□□□ 0.88
COMMD4-213ENST00000565834 HIC1Q14526 733 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 CCDC40Q4G0X9 1142 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 FILIP1LQ4L180 1135 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 KIAA0319LQ8IZA0 1049 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 NAP1L5Q96NT1 182 aaPredicted RBP20.54■□□□□ 0.88
COMMD4-213ENST00000565834 UNC93B1Q9H1C4 597 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 TAB2Q9NYJ8 693 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 A0A1B0GTH6 734 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 HNRNPDLO14979 420 aaKnown RBP20.54■□□□□ 0.88
COMMD4-213ENST00000565834 CABYRO75952 493 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 TPM2P07951 284 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 PHKA2P46019 1235 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 COPB1P53618 953 aaKnown RBP20.54■□□□□ 0.88
COMMD4-213ENST00000565834 POU5F1BQ06416 359 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 MYBPC2Q14324 1141 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.54■□□□□ 0.88
COMMD4-213ENST00000565834 SLC9A9Q8IVB4 645 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 C12orf56Q8IXR9 622 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 ZNF668Q96K58 619 aaPredicted RBP20.54■□□□□ 0.88
COMMD4-213ENST00000565834 PPP1R9BQ96SB3 815 aa20.54■□□□□ 0.88
COMMD4-213ENST00000565834 FAM49AQ9H0Q0 323 aaPredicted RBP20.54■□□□□ 0.88
COMMD4-213ENST00000565834 TISP43B9A030 160 aa20.53■□□□□ 0.88
COMMD4-213ENST00000565834 TREHO43280 583 aa20.53■□□□□ 0.88
COMMD4-213ENST00000565834 CDC25BP30305 580 aa20.53■□□□□ 0.88
COMMD4-213ENST00000565834 CYP2J2P51589 502 aa20.53■□□□□ 0.88
COMMD4-213ENST00000565834 ACLYP53396 1101 aa20.53■□□□□ 0.88
COMMD4-213ENST00000565834 PTENP60484 403 aa20.53■□□□□ 0.88
COMMD4-213ENST00000565834 CEP135Q66GS9 1140 aa20.53■□□□□ 0.88
COMMD4-213ENST00000565834 ARMCX5Q6P1M9 558 aa20.53■□□□□ 0.88
COMMD4-213ENST00000565834 CTU1Q7Z7A3 348 aaKnown RBP20.53■□□□□ 0.88
COMMD4-213ENST00000565834 ARRDC4Q8NCT1 418 aa20.53■□□□□ 0.88
COMMD4-213ENST00000565834 TUBGCP2Q9BSJ2 902 aa20.53■□□□□ 0.88
COMMD4-213ENST00000565834 TSEN34Q9BSV6 310 aaKnown RBP20.53■□□□□ 0.88
COMMD4-213ENST00000565834 NFKBIZQ9BYH8 718 aa20.53■□□□□ 0.88
COMMD4-213ENST00000565834 CCDC113Q9H0I3 377 aa20.53■□□□□ 0.88
COMMD4-213ENST00000565834 VPS16Q9H269 839 aa20.53■□□□□ 0.88
COMMD4-213ENST00000565834 DMAC2Q9NW81 257 aa20.53■□□□□ 0.88
COMMD4-213ENST00000565834 GTF2IRD1Q9UHL9 959 aa20.53■□□□□ 0.88
COMMD4-213ENST00000565834 MOXD2PA6NHM9 499 aa20.52■□□□□ 0.88
COMMD4-213ENST00000565834 ANKRD63C9JTQ0 380 aa20.52■□□□□ 0.88
COMMD4-213ENST00000565834 N4BP3O15049 544 aa20.52■□□□□ 0.88
COMMD4-213ENST00000565834 SLC16A3O15427 465 aaKnown RBP20.52■□□□□ 0.88
COMMD4-213ENST00000565834 EPB41P11171 864 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms