RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 SYCP3Q8IZU3 236 aa8.57□□□□□ -1.04
CDH1-208ENST00000565810 TMEM161BQ8NDZ6 487 aa8.57□□□□□ -1.04
CDH1-208ENST00000565810 BSNDQ8WZ55 320 aa8.57□□□□□ -1.04
CDH1-208ENST00000565810 HPS3Q969F9 1004 aa8.57□□□□□ -1.04
CDH1-208ENST00000565810 HVCN1Q96D96 273 aa8.57□□□□□ -1.04
CDH1-208ENST00000565810 BICD1Q96G01 975 aa8.57□□□□□ -1.04
CDH1-208ENST00000565810 ZNF668Q96K58 619 aaPredicted RBP8.57□□□□□ -1.04
CDH1-208ENST00000565810 ACCSQ96QU6 501 aa8.57□□□□□ -1.04
CDH1-208ENST00000565810 OSMRQ99650 979 aa8.57□□□□□ -1.04
CDH1-208ENST00000565810 FDXACB1Q9BRP7 624 aaPredicted RBP8.57□□□□□ -1.04
CDH1-208ENST00000565810 KIFC3Q9BVG8 833 aa8.57□□□□□ -1.04
CDH1-208ENST00000565810 CELF4Q9BZC1 486 aaKnown RBP8.57□□□□□ -1.04
CDH1-208ENST00000565810 NAT10Q9H0A0 1025 aaKnown RBP8.57□□□□□ -1.04
CDH1-208ENST00000565810 ST6GALNAC4Q9H4F1 302 aa8.57□□□□□ -1.04
CDH1-208ENST00000565810 TMEM206Q9H813 350 aa8.57□□□□□ -1.04
CDH1-208ENST00000565810 PRMT7Q9NVM4 692 aaPredicted RBP8.57□□□□□ -1.04
CDH1-208ENST00000565810 ARHGAP28Q9P2N2 729 aa8.57□□□□□ -1.04
CDH1-208ENST00000565810 PRKAG2Q9UGJ0 569 aa8.57□□□□□ -1.04
CDH1-208ENST00000565810 CDY2AQ9Y6F7 541 aa8.57□□□□□ -1.04
CDH1-208ENST00000565810 UBE4BO95155 1302 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 PITPNM1O00562 1244 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 PSMA7O14818 248 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 RPS6KA5O75582 802 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 ERLIN2O94905 339 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 PRPF6O94906 941 aaKnown RBP8.56□□□□□ -1.04
CDH1-208ENST00000565810 PARNO95453 639 aaKnown RBP8.56□□□□□ -1.04
CDH1-208ENST00000565810 PRKCBP05771 671 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 MYBP10242 640 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 CKBP12277 381 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 DARSP14868 501 aaKnown RBP8.56□□□□□ -1.04
CDH1-208ENST00000565810 SELPP16109 830 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 SFPQP23246 707 aaKnown RBP eCLIP8.56□□□□□ -1.04
CDH1-208ENST00000565810 TYRO3Q06418 890 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 FAAP100Q0VG06 881 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 COBLL1Q53SF7 1204 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 FAM26DQ5JW98 314 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 ZNF618Q5T7W0 954 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 CDCA2Q69YH5 1023 aaPredicted RBP8.56□□□□□ -1.04
CDH1-208ENST00000565810 HS2ST1Q7LGA3 356 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 CATSPER4Q7RTX7 472 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 UBE2Q1Q7Z7E8 422 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 IFNLR1Q8IU57 520 aaPredicted RBP8.56□□□□□ -1.04
CDH1-208ENST00000565810 GUF1Q8N442 669 aaKnown RBP8.56□□□□□ -1.04
CDH1-208ENST00000565810 USP38Q8NB14 1042 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 KIAA0895Q8NCT3 520 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 GOLGA5Q8TBA6 731 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 ZNF507Q8TCN5 953 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 SCFD1Q8WVM8 642 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 KCNN1Q92952 543 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 DHTKD1Q96HY7 919 aaPredicted RBP8.56□□□□□ -1.04
CDH1-208ENST00000565810 PRIMPOLQ96LW4 560 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 FIZ1Q96SL8 496 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 TSG101Q99816 390 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 MRPL4Q9BYD3 311 aaKnown RBP8.56□□□□□ -1.04
CDH1-208ENST00000565810 ADAMTS10Q9H324 1103 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 HIPK3Q9H422 1215 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 IFT122Q9HBG6 1241 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 PRDM5Q9NQX1 630 aaPredicted RBP8.56□□□□□ -1.04
CDH1-208ENST00000565810 TBX20Q9UMR3 447 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 MAPK8IP1Q9UQF2 711 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 GDAQ9Y2T3 454 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 SQORQ9Y6N5 450 aa8.56□□□□□ -1.04
CDH1-208ENST00000565810 BICDL2A1A5D9 508 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 ACKR2O00590 384 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 GPR182O15218 404 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 CALUO43852 315 aaPredicted RBP8.55□□□□□ -1.04
CDH1-208ENST00000565810 CAVIN2O95810 425 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 CHRNA1P02708 482 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 PRCPP42785 496 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 LIG4P49917 911 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 SNRPFP62306 86 aaKnown RBP8.55□□□□□ -1.04
CDH1-208ENST00000565810 MBTD1Q05BQ5 628 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 RBL2Q08999 1139 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 MGAT3Q09327 533 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 PAK1Q13153 545 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 PRPF4BQ13523 1007 aaKnown RBP8.55□□□□□ -1.04
CDH1-208ENST00000565810 FAM187BQ17R55 369 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 KNOP1Q1ED39 458 aaKnown RBP8.55□□□□□ -1.04
CDH1-208ENST00000565810 BMT2Q1RMZ1 405 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 TRIM71Q2Q1W2 868 aaKnown RBP8.55□□□□□ -1.04
CDH1-208ENST00000565810 ZC2HC1CQ53FD0 456 aaPredicted RBP8.55□□□□□ -1.04
CDH1-208ENST00000565810 KLHL10Q6JEL2 608 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 LRSAM1Q6UWE0 723 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 LRRC8DQ7L1W4 858 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 EPM2AIP1Q7L775 607 aaPredicted RBP8.55□□□□□ -1.04
CDH1-208ENST00000565810 APBB1IPQ7Z5R6 666 aaPredicted RBP8.55□□□□□ -1.04
CDH1-208ENST00000565810 MAP4K3Q8IVH8 894 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 NELFCDQ8IXH7 590 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 SMYD4Q8IYR2 804 aaPredicted RBP8.55□□□□□ -1.04
CDH1-208ENST00000565810 ADSSL1Q8N142 457 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 DHX38Q92620 1227 aaKnown RBP8.55□□□□□ -1.04
CDH1-208ENST00000565810 WNT8BQ93098 351 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 CTAGE1Q96RT6 745 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 PPP1R12CQ9BZL4 782 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 GBP3Q9H0R5 595 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 FZD8Q9H461 694 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 CGNQ9P2M7 1197 aaKnown RBP8.55□□□□□ -1.04
CDH1-208ENST00000565810 DOCK5Q9H7D0 1870 aa8.55□□□□□ -1.04
CDH1-208ENST00000565810 ADGRA3Q8IWK6 1321 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 SCN10AQ9Y5Y9 1956 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms