RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 CLEC1BQ9P126 229 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 LZTS1Q9Y250 596 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 PER2O15055 1255 aa11.19□□□□□ -0.62
CMTM3-209ENST00000565003 GAS2O43903 313 aaKnown RBP11.19□□□□□ -0.62
CMTM3-209ENST00000565003 ATP2B1P20020 1258 aa11.19□□□□□ -0.62
CMTM3-209ENST00000565003 HOXA11P31270 313 aaPredicted RBP11.19□□□□□ -0.62
CMTM3-209ENST00000565003 HOXD11P31277 338 aaPredicted RBP11.19□□□□□ -0.62
CMTM3-209ENST00000565003 SSTR3P32745 418 aaPredicted RBP11.19□□□□□ -0.62
CMTM3-209ENST00000565003 ZP2Q05996 745 aa11.19□□□□□ -0.62
CMTM3-209ENST00000565003 SMAD4Q13485 552 aaKnown RBP11.19□□□□□ -0.62
CMTM3-209ENST00000565003 SAFBQ15424 915 aaKnown RBP eCLIP11.19□□□□□ -0.62
CMTM3-209ENST00000565003 SMAD2Q15796 467 aaKnown RBP11.19□□□□□ -0.62
CMTM3-209ENST00000565003 PLPP4Q5VZY2 271 aa11.19□□□□□ -0.62
CMTM3-209ENST00000565003 SRGAP1Q7Z6B7 1085 aa11.19□□□□□ -0.62
CMTM3-209ENST00000565003 EXOC8Q8IYI6 725 aa11.19□□□□□ -0.62
CMTM3-209ENST00000565003 SLC39A11Q8N1S5 342 aa11.19□□□□□ -0.62
CMTM3-209ENST00000565003 RNF149Q8NC42 400 aa11.19□□□□□ -0.62
CMTM3-209ENST00000565003 TCP11Q8WWU5 503 aa11.19□□□□□ -0.62
CMTM3-209ENST00000565003 MRPS27Q92552 414 aaKnown RBP11.19□□□□□ -0.62
CMTM3-209ENST00000565003 MSLNLQ96KJ4 702 aa11.19□□□□□ -0.62
CMTM3-209ENST00000565003 ZSCAN31Q96LW9 406 aaPredicted RBP11.19□□□□□ -0.62
CMTM3-209ENST00000565003 TCF25Q9BQ70 676 aa11.19□□□□□ -0.62
CMTM3-209ENST00000565003 C1QTNF1Q9BXJ1 281 aa11.19□□□□□ -0.62
CMTM3-209ENST00000565003 TLE6Q9H808 572 aa11.19□□□□□ -0.62
CMTM3-209ENST00000565003 CD207Q9UJ71 328 aa11.19□□□□□ -0.62
CMTM3-209ENST00000565003 BARX2Q9UMQ3 279 aaPredicted RBP11.19□□□□□ -0.62
CMTM3-209ENST00000565003 FAM50BQ9Y247 325 aa11.19□□□□□ -0.62
CMTM3-209ENST00000565003 A0A087WWV3 80 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 HIDE1A8MVS5 230 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 NT5C1B-RDH14C9J2C7 533 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 ZNF623O75123 536 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 EYA4O95677 639 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 SPATA31C1P0DKV0 1188 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 COL9A1P20849 921 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 PPM1AP35813 382 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 RBM25P49756 843 aaKnown RBP11.18□□□□□ -0.62
CMTM3-209ENST00000565003 RARRES1P49788 294 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 RAB27AP51159 221 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 DUSP6Q16828 381 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 UBXN11Q5T124 520 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 PDE12Q6L8Q7 609 aaKnown RBP11.18□□□□□ -0.62
CMTM3-209ENST00000565003 TMEM173Q86WV6 379 aaPredicted RBP11.18□□□□□ -0.62
CMTM3-209ENST00000565003 ADHFE1Q8IWW8 467 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 SMRP1Q8NCR6 262 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 FBXO18Q8NFZ0 1043 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 ASAP3Q8TDY4 903 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 PIGOQ8TEQ8 1089 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 MRPL9Q9BYD2 267 aaKnown RBP11.18□□□□□ -0.62
CMTM3-209ENST00000565003 FOXP1Q9H334 677 aaPredicted RBP11.18□□□□□ -0.62
CMTM3-209ENST00000565003 C11orf16Q9NQ32 467 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 ENTPD7Q9NQZ7 604 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 SH2B1Q9NRF2 756 aaPredicted RBP11.18□□□□□ -0.62
CMTM3-209ENST00000565003 ANKEF1Q9NU02 776 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 TBC1D13Q9NVG8 400 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 SPG21Q9NZD8 308 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 PRKAG3Q9UGI9 489 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 RAPGEFL1Q9UHV5 662 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 INPP5FQ9Y2H2 1132 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 PCDHB2Q9Y5E7 798 aa11.18□□□□□ -0.62
CMTM3-209ENST00000565003 FAM86C2PA6NEL3 165 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 C19orf67A6NJJ6 358 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 PI4K2BG5E9Z4 385 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 ASAP2O43150 1006 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 B4GALT3O60512 393 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 ZC3H11AO75152 810 aaKnown RBP eCLIP11.17□□□□□ -0.62
CMTM3-209ENST00000565003 MED24O75448 989 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 OFD1O75665 1012 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 DGAT1O75907 488 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 SKIP12755 728 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 AFF1P51825 1210 aaKnown RBP11.17□□□□□ -0.62
CMTM3-209ENST00000565003 BCAR1P56945 870 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 HMGN5P82970 282 aaKnown RBP11.17□□□□□ -0.62
CMTM3-209ENST00000565003 COASYQ13057 564 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 CAPSQ13938 189 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 KCNC3Q14003 757 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 ZNF174Q15697 407 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 TTC38Q5R3I4 469 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 GLB1LQ6UWU2 654 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 AGMOQ6ZNB7 445 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 CATSPER3Q86XQ3 398 aa11.17□□□□□ -0.62
CMTM3-209ENST00000565003 CDCA3Q99618 268 aaPredicted RBP11.17□□□□□ -0.62
CMTM3-209ENST00000565003 PUF60Q9UHX1 559 aaKnown RBP11.17□□□□□ -0.62
CMTM3-209ENST00000565003 TSPAN1O60635 241 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 USO1O60763 962 aaKnown RBP11.16□□□□□ -0.62
CMTM3-209ENST00000565003 ERLIN2O94905 339 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 OR52Z1P0C646 297 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 GLRA2P23416 452 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 ARL2P36404 184 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 TECP42680 631 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 ALDH7A1P49419 539 aaKnown RBP11.16□□□□□ -0.62
CMTM3-209ENST00000565003 PTENP60484 403 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 KRT17Q04695 432 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 MBTD1Q05BQ5 628 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 MXD4Q14582 209 aaPredicted RBP11.16□□□□□ -0.62
CMTM3-209ENST00000565003 NBR1Q14596 966 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 AMHR2Q16671 573 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 NOMO2Q5JPE7 1267 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 POTEGQ6S5H5 508 aa11.16□□□□□ -0.62
CMTM3-209ENST00000565003 MRPL10Q7Z7H8 261 aaKnown RBP11.16□□□□□ -0.62
CMTM3-209ENST00000565003 IFNLR1Q8IU57 520 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms