RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 FOXN3O00409 490 aaPredicted RBP22.09■■□□□ 1.13
MAP1LC3B-206ENST00000564844 CLSTN1O94985 981 aa22.09■■□□□ 1.13
MAP1LC3B-206ENST00000564844 WDR66Q8TBY9 1149 aa22.09■■□□□ 1.13
MAP1LC3B-206ENST00000564844 SPIRE2Q8WWL2 714 aa22.09■■□□□ 1.13
MAP1LC3B-206ENST00000564844 SEC14L1Q92503 715 aa22.09■■□□□ 1.13
MAP1LC3B-206ENST00000564844 MTMR4Q9NYA4 1195 aa22.09■■□□□ 1.13
MAP1LC3B-206ENST00000564844 USP15Q9Y4E8 981 aaPredicted RBP22.09■■□□□ 1.13
MAP1LC3B-206ENST00000564844 ASTN1O14525 1302 aa22.09■■□□□ 1.13
MAP1LC3B-206ENST00000564844 RIPK2O43353 540 aa22.09■■□□□ 1.13
MAP1LC3B-206ENST00000564844 SOX5P35711 763 aa22.09■■□□□ 1.13
MAP1LC3B-206ENST00000564844 FAM98CQ17RN3 349 aaKnown RBP22.09■■□□□ 1.13
MAP1LC3B-206ENST00000564844 C6orf118Q5T5N4 469 aa22.09■■□□□ 1.13
MAP1LC3B-206ENST00000564844 PRUNE1Q86TP1 453 aa22.09■■□□□ 1.13
MAP1LC3B-206ENST00000564844 FAM186BQ8IYM0 893 aa22.09■■□□□ 1.13
MAP1LC3B-206ENST00000564844 MYCT1Q8N699 235 aa22.09■■□□□ 1.13
MAP1LC3B-206ENST00000564844 SNED1Q8TER0 1413 aa22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 PYGMP11217 842 aa22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 PRKCIP41743 596 aa22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 MPP2Q14168 576 aa22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 EDRF1Q3B7T1 1238 aa22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 HP1BP3Q5SSJ5 553 aaPredicted RBP22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 MAGEC3Q8TD91 643 aa22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 TMEM237Q96Q45 408 aa22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 ANKRD2Q9GZV1 360 aa22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 EBF2Q9HAK2 575 aa22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 MTRF1LQ9UGC7 380 aaKnown RBP22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 MYH14Q7Z406 1995 aaKnown RBP22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 AFF2P51816 1311 aa22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 CALUO43852 315 aaPredicted RBP22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 TBCAO75347 108 aaKnown RBP22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 FTLP02792 175 aaPredicted RBP22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 ZBTB10Q96DT7 871 aa22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 HOOK2Q96ED9 719 aa22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 PGM2Q96G03 612 aa22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 NSRP1Q9H0G5 558 aaKnown RBP22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 RASAL2Q9UJF2 1139 aa22.08■■□□□ 1.13
MAP1LC3B-206ENST00000564844 DLATP10515 647 aaKnown RBP22.08■■□□□ 1.12
MAP1LC3B-206ENST00000564844 FERP16591 822 aa22.08■■□□□ 1.12
MAP1LC3B-206ENST00000564844 CACNB3P54284 484 aa22.08■■□□□ 1.12
MAP1LC3B-206ENST00000564844 JAM2P57087 298 aa22.08■■□□□ 1.12
MAP1LC3B-206ENST00000564844 KYNUQ16719 465 aa22.08■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ATG4AQ8WYN0 398 aa22.08■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ZNF622Q969S3 477 aaKnown RBP eCLIP22.08■■□□□ 1.125e-7■□□□□ 9.2
MAP1LC3B-206ENST00000564844 PCIF1Q9H4Z3 704 aa22.08■■□□□ 1.12
MAP1LC3B-206ENST00000564844 PNMA6FA0A0J9YX94 578 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 C6orf229H3BNL8 230 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 PDHA1P08559 390 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 NUDT17P0C025 328 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 HOXA13P31271 388 aaPredicted RBP22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 PDE6CP51160 858 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 SCNN1DP51172 638 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ITIH4Q14624 930 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 CAPN12Q6ZSI9 719 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ARHGAP27Q6ZUM4 889 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 CENPTQ96BT3 561 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 PCDHA1Q9Y5I3 950 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 PCNTO95613 3336 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 PFASO15067 1338 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 UBAP1LF5GYI3 381 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 UFL1O94874 794 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 CALCAP01258 141 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 PPATQ06203 517 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 CAPRIN2Q6IMN6 1127 aaKnown RBP22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 P3H4Q92791 437 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 L3MBTL3Q96JM7 780 aaPredicted RBP22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 P2RX7Q99572 595 aaKnown RBP22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ETNK1Q9HBU6 452 aa22.07■■□□□ 1.12
MAP1LC3B-206ENST00000564844 KDM3AQ9Y4C1 1321 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 NHSL1Q5SYE7 1610 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ESYT2A0FGR8 921 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 VCAM1P19320 739 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 COMTP21964 271 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 CHKAP35790 457 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 PTGIRP43119 386 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 COPS2P61201 443 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 MFSD14BQ5SR56 506 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ZMYND8Q9ULU4 1186 aaPredicted RBP22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 TISP43B9A030 160 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 AGTP01019 485 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 MSH2P43246 934 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 UBXN2AP68543 259 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ADCY2Q08462 1091 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 SEPT2Q15019 361 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 SRRM1Q8IYB3 904 aaKnown RBP22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 KAT5Q92993 513 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 CDC42EP4Q9H3Q1 356 aaKnown RBP22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ASIC3Q9UHC3 531 aa22.06■■□□□ 1.12
MAP1LC3B-206ENST00000564844 SUN1O94901 812 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 SATB1Q01826 763 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 DAB2IPQ5VWQ8 1189 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 TPH2Q8IWU9 490 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 CARD9Q9H257 536 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 NKX1-2Q9UD57 310 aaPredicted RBP22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 RBM26Q5T8P6 1007 aaKnown RBP22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 THEMIS2Q5TEJ8 643 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 CYP4X1Q8N118 509 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 SPOCK2Q92563 424 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 SH2D3AQ9BRG2 576 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 TRAF3IP3Q9Y228 551 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 TGFB1I1O43294 461 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms