RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 TCP11Q8WWU5 503 aa14.13□□□□□ -0.15
HERC2-206ENST00000564519 LPPQ93052 612 aa14.13□□□□□ -0.15
HERC2-206ENST00000564519 POP1Q99575 1024 aaKnown RBP14.13□□□□□ -0.15
HERC2-206ENST00000564519 INO80BQ9C086 356 aaPredicted RBP14.13□□□□□ -0.15
HERC2-206ENST00000564519 RNF216Q9NWF9 866 aaPredicted RBP14.13□□□□□ -0.15
HERC2-206ENST00000564519 DACT1Q9NYF0 836 aa14.13□□□□□ -0.15
HERC2-206ENST00000564519 NOL7Q9UMY1 257 aaKnown RBP14.13□□□□□ -0.15
HERC2-206ENST00000564519 GAS2O43903 313 aaKnown RBP14.12□□□□□ -0.15
HERC2-206ENST00000564519 USO1O60763 962 aaKnown RBP14.12□□□□□ -0.15
HERC2-206ENST00000564519 DGAT1O75907 488 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 GLRA2P23416 452 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 HOXA11P31270 313 aaPredicted RBP14.12□□□□□ -0.15
HERC2-206ENST00000564519 GTF2F1P35269 517 aaKnown RBP eCLIP14.12□□□□□ -0.15
HERC2-206ENST00000564519 ARL2P36404 184 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 PBX3P40426 434 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 MCM2P49736 904 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 HYAL1Q12794 435 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 IL17AQ16552 155 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 NAALADL2Q58DX5 795 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 POTEGQ6S5H5 508 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 MAEAQ7L5Y9 396 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 SRGAP1Q7Z6B7 1085 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 ADGRD2Q7Z7M1 963 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 ADHFE1Q8IWW8 467 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 COLGALT1Q8NBJ5 622 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 POLR3CQ9BUI4 534 aaPredicted RBP14.12□□□□□ -0.15
HERC2-206ENST00000564519 IGFLR1Q9H665 355 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 TUFT1Q9NNX1 390 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 GPRC5CQ9NQ84 441 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 AGPAT5Q9NUQ2 364 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 FAM105AQ9NUU6 356 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 RALGAPA2Q2PPJ7 1873 aa14.12□□□□□ -0.15
HERC2-206ENST00000564519 ASAP2O43150 1006 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 HOXA2O43364 376 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 EOMESO95936 686 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 XRCC6P12956 609 aaKnown RBP eCLIP14.11□□□□□ -0.15
HERC2-206ENST00000564519 RPA1P27694 616 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.158e-6■■□□□ 12.8
HERC2-206ENST00000564519 PTENP60484 403 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 ZP2Q05996 745 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 PTGDRQ13258 359 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 CAPSQ13938 189 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 COL19A1Q14993 1142 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 CLUL1Q15846 466 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 UBXN11Q5T124 520 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 MCTP1Q6DN14 999 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 NLRC5Q86WI3 1866 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 ABI1Q8IZP0 508 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 LRRC43Q8N309 656 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 CCDC43Q96MW1 224 aaKnown RBP14.11□□□□□ -0.15
HERC2-206ENST00000564519 TRAIPQ9BWF2 469 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 BACH2Q9BYV9 841 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 POLR3FQ9H1D9 316 aaPredicted RBP14.11□□□□□ -0.15
HERC2-206ENST00000564519 PCDHB12Q9Y5F1 795 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 NCOR1O75376 2440 aa14.11□□□□□ -0.15
HERC2-206ENST00000564519 PP2D1A8MPX8 630 aa14.1□□□□□ -0.15
HERC2-206ENST00000564519 LINC01565O15544 149 aa14.1□□□□□ -0.15
HERC2-206ENST00000564519 FGF18O76093 207 aa14.1□□□□□ -0.15
HERC2-206ENST00000564519 LAG3P18627 525 aa14.1□□□□□ -0.15
HERC2-206ENST00000564519 LTBRP36941 435 aa14.1□□□□□ -0.15
HERC2-206ENST00000564519 MBTD1Q05BQ5 628 aa14.1□□□□□ -0.15
HERC2-206ENST00000564519 DLX2Q07687 328 aaPredicted RBP14.1□□□□□ -0.15
HERC2-206ENST00000564519 ALYREFQ86V81 257 aaKnown RBP14.1□□□□□ -0.15
HERC2-206ENST00000564519 THNSL1Q8IYQ7 743 aa14.1□□□□□ -0.15
HERC2-206ENST00000564519 ERMNQ8TAM6 284 aa14.1□□□□□ -0.15
HERC2-206ENST00000564519 NACC1Q96RE7 527 aa14.1□□□□□ -0.15
HERC2-206ENST00000564519 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.1□□□□□ -0.15
HERC2-206ENST00000564519 AAASQ9NRG9 546 aa14.1□□□□□ -0.15
HERC2-206ENST00000564519 DBR1Q9UK59 544 aaKnown RBP14.1□□□□□ -0.15
HERC2-206ENST00000564519 SMC3Q9UQE7 1217 aa14.1□□□□□ -0.15
HERC2-206ENST00000564519 KIF3AQ9Y496 699 aa14.1□□□□□ -0.15
HERC2-206ENST00000564519 PCDHB2Q9Y5E7 798 aa14.1□□□□□ -0.15
HERC2-206ENST00000564519 KIAA1671Q9BY89 1806 aa14.09□□□□□ -0.15
HERC2-206ENST00000564519 H3BQV1 296 aa14.09□□□□□ -0.15
HERC2-206ENST00000564519 TSPAN1O60635 241 aa14.09□□□□□ -0.15
HERC2-206ENST00000564519 ZNF623O75123 536 aa14.09□□□□□ -0.15
HERC2-206ENST00000564519 OFD1O75665 1012 aa14.09□□□□□ -0.15
HERC2-206ENST00000564519 CCT6AP40227 531 aaKnown RBP14.09□□□□□ -0.15
HERC2-206ENST00000564519 NDUFV1P49821 464 aa14.09□□□□□ -0.15
HERC2-206ENST00000564519 ERVFC1P60507 584 aa14.09□□□□□ -0.15
HERC2-206ENST00000564519 MXD4Q14582 209 aaPredicted RBP14.09□□□□□ -0.15
HERC2-206ENST00000564519 AMHR2Q16671 573 aa14.09□□□□□ -0.15
HERC2-206ENST00000564519 CTC1Q2NKJ3 1217 aa14.09□□□□□ -0.15
HERC2-206ENST00000564519 KCNT2Q6UVM3 1135 aa14.09□□□□□ -0.15
HERC2-206ENST00000564519 AGMOQ6ZNB7 445 aa14.09□□□□□ -0.15
HERC2-206ENST00000564519 IFNLR1Q8IU57 520 aaPredicted RBP14.09□□□□□ -0.15
HERC2-206ENST00000564519 CPB2Q96IY4 423 aa14.09□□□□□ -0.15
HERC2-206ENST00000564519 MFSD14AQ96MC6 490 aa14.09□□□□□ -0.15
HERC2-206ENST00000564519 EIF2AQ9BY44 585 aaKnown RBP14.09□□□□□ -0.15
HERC2-206ENST00000564519 POLD4Q9HCU8 107 aa14.09□□□□□ -0.15
HERC2-206ENST00000564519 LRWD1Q9UFC0 647 aa14.09□□□□□ -0.15
HERC2-206ENST00000564519 FNDC1Q4ZHG4 1894 aaPredicted RBP14.08□□□□□ -0.16
HERC2-206ENST00000564519 NT5C1B-RDH14C9J2C7 533 aa14.08□□□□□ -0.16
HERC2-206ENST00000564519 INO80B-WBP1J3KQ70 363 aa14.08□□□□□ -0.16
HERC2-206ENST00000564519 B4GALT5O43286 388 aa14.08□□□□□ -0.16
HERC2-206ENST00000564519 B4GALT3O60512 393 aa14.08□□□□□ -0.16
HERC2-206ENST00000564519 CDC25AP30304 524 aa14.08□□□□□ -0.16
HERC2-206ENST00000564519 RAB27AP51159 221 aa14.08□□□□□ -0.16
HERC2-206ENST00000564519 AFF1P51825 1210 aaKnown RBP14.08□□□□□ -0.16
HERC2-206ENST00000564519 SMAD4Q13485 552 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms