RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 CDH23Q9H251 3354 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 TMEM265A0A087WTH1 108 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 MAPTP10636 758 aaKnown RBP18.69■□□□□ 0.58
CMTM3-208ENST00000564247 ACTN1P12814 892 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 ARL2P36404 184 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 PPP1R2P41236 205 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 ADAM17P78536 824 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 MAPK7Q13164 816 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 DMP1Q13316 513 aaPredicted RBP18.69■□□□□ 0.58
CMTM3-208ENST00000564247 STIM1Q13586 685 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 MXD4Q14582 209 aaPredicted RBP18.69■□□□□ 0.58
CMTM3-208ENST00000564247 GPNMBQ14956 572 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 STXBP4Q6ZWJ1 553 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 SFR1Q86XK3 245 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 FAM178BQ8IXR5 827 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 DAW1Q8N136 415 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 MLKLQ8NB16 471 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 PSPC1Q8WXF1 523 aaKnown RBP18.69■□□□□ 0.58
CMTM3-208ENST00000564247 MAP7D2Q96T17 732 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 MRPL44Q9H9J2 332 aaKnown RBP18.69■□□□□ 0.58
CMTM3-208ENST00000564247 PCDHA2Q9Y5H9 948 aa18.69■□□□□ 0.58
CMTM3-208ENST00000564247 CCDC169A6NNP5 214 aa18.68■□□□□ 0.58
CMTM3-208ENST00000564247 TREHO43280 583 aa18.68■□□□□ 0.58
CMTM3-208ENST00000564247 KIF20AO95235 890 aa18.68■□□□□ 0.58
CMTM3-208ENST00000564247 PEX3P56589 373 aa18.68■□□□□ 0.58
CMTM3-208ENST00000564247 CDC42EP1Q00587 391 aa18.68■□□□□ 0.58
CMTM3-208ENST00000564247 MARCH8Q5T0T0 291 aa18.68■□□□□ 0.58
CMTM3-208ENST00000564247 TRAF7Q6Q0C0 670 aa18.68■□□□□ 0.58
CMTM3-208ENST00000564247 LRRC71Q8N4P6 559 aa18.68■□□□□ 0.58
CMTM3-208ENST00000564247 PRPF31Q8WWY3 499 aaKnown RBP18.68■□□□□ 0.58
CMTM3-208ENST00000564247 NAT10Q9H0A0 1025 aaKnown RBP18.68■□□□□ 0.58
CMTM3-208ENST00000564247 SLC39A2Q9NP94 309 aa18.68■□□□□ 0.58
CMTM3-208ENST00000564247 OLFML3Q9NRN5 406 aa18.68■□□□□ 0.58
CMTM3-208ENST00000564247 TBC1D7Q9P0N9 293 aa18.68■□□□□ 0.58
CMTM3-208ENST00000564247 PCDHB13Q9Y5F0 798 aa18.68■□□□□ 0.58
CMTM3-208ENST00000564247 SLC4A7Q9Y6M7 1214 aa18.68■□□□□ 0.58
CMTM3-208ENST00000564247 GBF1Q92538 1859 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 SMIM35A0A1B0GVV1 85 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 MBLAC1A4D2B0 266 aaPredicted RBP18.67■□□□□ 0.58
CMTM3-208ENST00000564247 H0YCG3 227 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 CAND2O75155 1236 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 CXCL10P02778 98 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 DNAJB2P25686 324 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 ABCD1P33897 745 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 EHHADHQ08426 723 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 STK4Q13043 487 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 TFDP1Q14186 410 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 CT47A1Q5JQC4 288 aaPredicted RBP18.67■□□□□ 0.58
CMTM3-208ENST00000564247 ZNF618Q5T7W0 954 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 SPIRE2Q8WWL2 714 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 NTPCRQ9BSD7 190 aaKnown RBP18.67■□□□□ 0.58
CMTM3-208ENST00000564247 SEMA6BQ9H3T3 888 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 TSPY26PQ9H489 355 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 KMT5AQ9NQR1 393 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 AKT3Q9Y243 479 aa18.67■□□□□ 0.58
CMTM3-208ENST00000564247 ZBBXA8MT70 800 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 GRXCR1A8MXD5 290 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 NBNO60934 754 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 CAVIN2O95810 425 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 RPLP2P05387 115 aaKnown RBP18.66■□□□□ 0.58
CMTM3-208ENST00000564247 SCP2P22307 547 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 THPOP40225 353 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 NAMPTP43490 491 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 CLCN3P51790 818 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 LAMTOR4Q0VGL1 99 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 MKRN4PQ13434 485 aaPredicted RBP18.66■□□□□ 0.58
CMTM3-208ENST00000564247 ALCAMQ13740 583 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 L1TD1Q5T7N2 865 aaKnown RBP18.66■□□□□ 0.58
CMTM3-208ENST00000564247 TAF2Q6P1X5 1199 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 RSPH3Q86UC2 560 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 RHPN2Q8IUC4 686 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 MYOCDQ8IZQ8 938 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 ZNF710Q8N1W2 664 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 NME8Q8N427 588 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 DEPTORQ8TB45 409 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 HPS3Q969F9 1004 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 PBX4Q9BYU1 374 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 TTYH1Q9H313 450 aaPredicted RBP18.66■□□□□ 0.58
CMTM3-208ENST00000564247 CHD9Q3L8U1 2897 aa18.66■□□□□ 0.58
CMTM3-208ENST00000564247 BAIAP3O94812 1187 aa18.65■□□□□ 0.58
CMTM3-208ENST00000564247 GCNT3O95395 438 aa18.65■□□□□ 0.58
CMTM3-208ENST00000564247 GLRA2P23416 452 aa18.65■□□□□ 0.58
CMTM3-208ENST00000564247 NPTX2P47972 431 aa18.65■□□□□ 0.58
CMTM3-208ENST00000564247 ZNF720Q7Z2F6 126 aa18.65■□□□□ 0.58
CMTM3-208ENST00000564247 KIAA0319LQ8IZA0 1049 aa18.65■□□□□ 0.58
CMTM3-208ENST00000564247 LINC01465Q8N7H1 131 aa18.65■□□□□ 0.58
CMTM3-208ENST00000564247 ASAP3Q8TDY4 903 aa18.65■□□□□ 0.58
CMTM3-208ENST00000564247 ZBTB10Q96DT7 871 aa18.65■□□□□ 0.58
CMTM3-208ENST00000564247 GUCD1Q96NT3 240 aa18.65■□□□□ 0.58
CMTM3-208ENST00000564247 FUCA2Q9BTY2 467 aa18.65■□□□□ 0.58
CMTM3-208ENST00000564247 FAM49AQ9H0Q0 323 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-208ENST00000564247 GDAQ9Y2T3 454 aa18.65■□□□□ 0.58
CMTM3-208ENST00000564247 LRRIQ4A6NIV6 560 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 K7ENM7 598 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 PSMA7O14818 248 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 SLC16A4O15374 487 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 SRGAP2CP0DJJ0 459 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 BMP6P22004 513 aa18.64■□□□□ 0.57
CMTM3-208ENST00000564247 NMT1P30419 496 aaKnown RBP18.64■□□□□ 0.57
CMTM3-208ENST00000564247 PBX2P40425 430 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms