RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 ABI1Q8IZP0 508 aa21.14■□□□□ 0.97
TRADD-203ENST00000563348 CWH43Q9H720 699 aa21.14■□□□□ 0.97
TRADD-203ENST00000563348 PCDHB12Q9Y5F1 795 aa21.14■□□□□ 0.97
TRADD-203ENST00000563348 NLRC5Q86WI3 1866 aa21.13■□□□□ 0.97
TRADD-203ENST00000563348 CAMK1Q14012 370 aa21.13■□□□□ 0.97
TRADD-203ENST00000563348 CLLU1OSQ5K130 101 aa21.13■□□□□ 0.97
TRADD-203ENST00000563348 LRRC55Q6ZSA7 311 aa21.13■□□□□ 0.97
TRADD-203ENST00000563348 MCPH1Q8NEM0 835 aa21.13■□□□□ 0.97
TRADD-203ENST00000563348 POLR3FQ9H1D9 316 aaPredicted RBP21.13■□□□□ 0.97
TRADD-203ENST00000563348 NSUN3Q9H649 340 aaKnown RBP21.13■□□□□ 0.97
TRADD-203ENST00000563348 FAM105AQ9NUU6 356 aa21.13■□□□□ 0.97
TRADD-203ENST00000563348 KIAA1024Q9UPX6 916 aa21.13■□□□□ 0.97
TRADD-203ENST00000563348 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.12■□□□□ 0.97
TRADD-203ENST00000563348 CYP11B2P19099 503 aa21.12■□□□□ 0.97
TRADD-203ENST00000563348 RAB27AP51159 221 aa21.12■□□□□ 0.97
TRADD-203ENST00000563348 ATP2C1P98194 919 aaPredicted RBP21.12■□□□□ 0.97
TRADD-203ENST00000563348 CAPSQ13938 189 aa21.12■□□□□ 0.97
TRADD-203ENST00000563348 TCEAL5Q5H9L2 206 aa21.12■□□□□ 0.97
TRADD-203ENST00000563348 PADI6Q6TGC4 694 aa21.12■□□□□ 0.97
TRADD-203ENST00000563348 MAEAQ7L5Y9 396 aa21.12■□□□□ 0.97
TRADD-203ENST00000563348 NFKBIZQ9BYH8 718 aa21.12■□□□□ 0.97
TRADD-203ENST00000563348 GPRC5CQ9NQ84 441 aa21.12■□□□□ 0.97
TRADD-203ENST00000563348 HCSTQ9UBK5 93 aa21.12■□□□□ 0.97
TRADD-203ENST00000563348 FNDC1Q4ZHG4 1894 aaPredicted RBP21.11■□□□□ 0.97
TRADD-203ENST00000563348 ARHGEF35A5YM69 484 aa21.11■□□□□ 0.97
TRADD-203ENST00000563348 LAG3P18627 525 aa21.11■□□□□ 0.97
TRADD-203ENST00000563348 PDCP20941 246 aa21.11■□□□□ 0.97
TRADD-203ENST00000563348 DNAJB1P25685 340 aa21.11■□□□□ 0.97
TRADD-203ENST00000563348 CSPP1Q1MSJ5 1256 aa21.11■□□□□ 0.97
TRADD-203ENST00000563348 KRT79Q5XKE5 535 aa21.11■□□□□ 0.97
TRADD-203ENST00000563348 MRPL10Q7Z7H8 261 aaKnown RBP21.11■□□□□ 0.97
TRADD-203ENST00000563348 LRRC43Q8N309 656 aa21.11■□□□□ 0.97
TRADD-203ENST00000563348 COLGALT1Q8NBJ5 622 aa21.11■□□□□ 0.97
TRADD-203ENST00000563348 HELQQ8TDG4 1101 aa21.11■□□□□ 0.97
TRADD-203ENST00000563348 SNX29Q8TEQ0 813 aa21.11■□□□□ 0.97
TRADD-203ENST00000563348 POF1BQ8WVV4 589 aa21.11■□□□□ 0.97
TRADD-203ENST00000563348 RSPH1Q8WYR4 309 aa21.11■□□□□ 0.97
TRADD-203ENST00000563348 PCDHB2Q9Y5E7 798 aa21.11■□□□□ 0.97
TRADD-203ENST00000563348 INO80B-WBP1J3KQ70 363 aa21.1■□□□□ 0.97
TRADD-203ENST00000563348 BMP1P13497 986 aa21.1■□□□□ 0.97
TRADD-203ENST00000563348 AXLP30530 894 aa21.1■□□□□ 0.97
TRADD-203ENST00000563348 UBE3AQ05086 875 aa21.1■□□□□ 0.97
TRADD-203ENST00000563348 MBTD1Q05BQ5 628 aa21.1■□□□□ 0.97
TRADD-203ENST00000563348 NCBP1Q09161 790 aaKnown RBP21.1■□□□□ 0.97
TRADD-203ENST00000563348 UBXN11Q5T124 520 aa21.1■□□□□ 0.97
TRADD-203ENST00000563348 LPPQ93052 612 aa21.1■□□□□ 0.97
TRADD-203ENST00000563348 PGBD4Q96DM1 585 aa21.1■□□□□ 0.97
TRADD-203ENST00000563348 INTS4Q96HW7 963 aaKnown RBP21.1■□□□□ 0.97
TRADD-203ENST00000563348 UBE2ZQ9H832 354 aaPredicted RBP21.1■□□□□ 0.97
TRADD-203ENST00000563348 DDX19AQ9NUU7 478 aaKnown RBP21.1■□□□□ 0.97
TRADD-203ENST00000563348 ARID2Q68CP9 1835 aa21.09■□□□□ 0.97
TRADD-203ENST00000563348 XIRP2A4UGR9 3374 aa21.09■□□□□ 0.97
TRADD-203ENST00000563348 PP2D1A8MPX8 630 aa21.09■□□□□ 0.97
TRADD-203ENST00000563348 TSPAN1O60635 241 aa21.09■□□□□ 0.97
TRADD-203ENST00000563348 FGF18O76093 207 aa21.09■□□□□ 0.97
TRADD-203ENST00000563348 ERLIN2O94905 339 aa21.09■□□□□ 0.97
TRADD-203ENST00000563348 CDC25AP30304 524 aa21.09■□□□□ 0.97
TRADD-203ENST00000563348 COL19A1Q14993 1142 aa21.09■□□□□ 0.97
TRADD-203ENST00000563348 AMHR2Q16671 573 aa21.09■□□□□ 0.97
TRADD-203ENST00000563348 ARL6IP4Q66PJ3 421 aaKnown RBP21.09■□□□□ 0.97
TRADD-203ENST00000563348 BRAPQ7Z569 592 aa21.09■□□□□ 0.97
TRADD-203ENST00000563348 MMTAG2Q9BU76 263 aaKnown RBP21.09■□□□□ 0.97
TRADD-203ENST00000563348 MRPL9Q9BYD2 267 aaKnown RBP21.09■□□□□ 0.97
TRADD-203ENST00000563348 BHMT2Q9H2M3 363 aa21.09■□□□□ 0.97
TRADD-203ENST00000563348 DNM3Q9UQ16 869 aa21.09■□□□□ 0.97
TRADD-203ENST00000563348 NCK2O43639 380 aa21.08■□□□□ 0.97
TRADD-203ENST00000563348 OFD1O75665 1012 aa21.08■□□□□ 0.97
TRADD-203ENST00000563348 LONRF3Q496Y0 759 aa21.08■□□□□ 0.97
TRADD-203ENST00000563348 KCNT2Q6UVM3 1135 aa21.08■□□□□ 0.97
TRADD-203ENST00000563348 GLB1LQ6UWU2 654 aa21.08■□□□□ 0.97
TRADD-203ENST00000563348 THNSL1Q8IYQ7 743 aa21.08■□□□□ 0.97
TRADD-203ENST00000563348 CCDC51Q96ER9 411 aa21.08■□□□□ 0.97
TRADD-203ENST00000563348 ZNF558Q96NG5 402 aa21.08■□□□□ 0.97
TRADD-203ENST00000563348 BDP1A6H8Y1 2624 aa21.07■□□□□ 0.96
TRADD-203ENST00000563348 LRRIQ4A6NIV6 560 aa21.07■□□□□ 0.96
TRADD-203ENST00000563348 MEIS3P2A8K0S8 358 aa21.07■□□□□ 0.96
TRADD-203ENST00000563348 K7ELQ4 463 aaPredicted RBP21.07■□□□□ 0.96
TRADD-203ENST00000563348 EYA4O95677 639 aa21.07■□□□□ 0.96
TRADD-203ENST00000563348 IRS1P35568 1242 aa21.07■□□□□ 0.96
TRADD-203ENST00000563348 KCNQ1P51787 676 aa21.07■□□□□ 0.96
TRADD-203ENST00000563348 PLCB3Q01970 1234 aa21.07■□□□□ 0.96
TRADD-203ENST00000563348 NOTUMQ6P988 496 aa21.07■□□□□ 0.96
TRADD-203ENST00000563348 AGMOQ6ZNB7 445 aa21.07■□□□□ 0.96
TRADD-203ENST00000563348 CNNM3Q8NE01 707 aa21.07■□□□□ 0.96
TRADD-203ENST00000563348 PABPC5Q96DU9 382 aaKnown RBP21.07■□□□□ 0.96
TRADD-203ENST00000563348 LZTS1Q9Y250 596 aa21.07■□□□□ 0.96
TRADD-203ENST00000563348 VPS37CA5D8V6 355 aaPredicted RBP21.06■□□□□ 0.96
TRADD-203ENST00000563348 VWA3AA6NCI4 1184 aa21.06■□□□□ 0.96
TRADD-203ENST00000563348 E9PMD0 336 aa21.06■□□□□ 0.96
TRADD-203ENST00000563348 CSPG5O95196 566 aa21.06■□□□□ 0.96
TRADD-203ENST00000563348 ARF4P18085 180 aaPredicted RBP21.06■□□□□ 0.96
TRADD-203ENST00000563348 NCLP19338 710 aaKnown RBP21.06■□□□□ 0.96
TRADD-203ENST00000563348 HYAL1Q12794 435 aa21.06■□□□□ 0.96
TRADD-203ENST00000563348 NOMO2Q5JPE7 1267 aa21.06■□□□□ 0.96
TRADD-203ENST00000563348 CDCA2Q69YH5 1023 aaPredicted RBP21.06■□□□□ 0.96
TRADD-203ENST00000563348 KCTD17Q8N5Z5 321 aa21.06■□□□□ 0.96
TRADD-203ENST00000563348 BSNDQ8WZ55 320 aa21.06■□□□□ 0.96
TRADD-203ENST00000563348 CPB2Q96IY4 423 aa21.06■□□□□ 0.96
TRADD-203ENST00000563348 CSRNP2Q9H175 543 aa21.06■□□□□ 0.96
TRADD-203ENST00000563348 FZD8Q9H461 694 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms