RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 THNSL1Q8IYQ7 743 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 C12orf76Q8N812 135 aaPredicted RBP10.56□□□□□ -0.72
RPAP1-205ENST00000563293 PYM1Q9BRP8 204 aaKnown RBP10.56□□□□□ -0.72
RPAP1-205ENST00000563293 ERVK-5Q9HDB9 667 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 LIMD1Q9UGP4 676 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 LRFN2Q9ULH4 789 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 PCDHA2Q9Y5H9 948 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 SQORQ9Y6N5 450 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 CEP250Q9BV73 2442 aa10.56□□□□□ -0.72
RPAP1-205ENST00000563293 C9IYK1 514 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 MEIS1O00470 390 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 ADAMTS3O15072 1205 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 SLC26A4O43511 780 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 PRPF40AO75400 957 aaKnown RBP10.55□□□□□ -0.72
RPAP1-205ENST00000563293 MBD3O95983 291 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 OR52Z1P0C646 297 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 NPR3P17342 541 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 LONP1P36776 959 aaKnown RBP10.55□□□□□ -0.72
RPAP1-205ENST00000563293 CEBPZQ03701 1054 aaKnown RBP10.55□□□□□ -0.72
RPAP1-205ENST00000563293 UBE3AQ05086 875 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 PDIA5Q14554 519 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 CALCRLQ16602 461 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 CWF19L1Q69YN2 538 aaKnown RBP10.55□□□□□ -0.72
RPAP1-205ENST00000563293 ASTLQ6HA08 431 aaPredicted RBP10.55□□□□□ -0.72
RPAP1-205ENST00000563293 DTHD1Q6ZMT9 781 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 C4orf32Q8N8J7 132 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 CYP2W1Q8TAV3 490 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 NKD2Q969F2 451 aaPredicted RBP10.55□□□□□ -0.72
RPAP1-205ENST00000563293 GPRASP2Q96D09 838 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 PGBD1Q96JS3 809 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 AK8Q96MA6 479 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 MTMR9Q96QG7 549 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 PPP1R16BQ96T49 567 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 CDCA3Q99618 268 aaPredicted RBP10.55□□□□□ -0.72
RPAP1-205ENST00000563293 ADAM2Q99965 735 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 TCF25Q9BQ70 676 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 MXRA8Q9BRK3 442 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 SMARCAD1Q9H4L7 1026 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 JADE2Q9NQC1 790 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 AAASQ9NRG9 546 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 RGS18Q9NS28 235 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 RNF19AQ9NV58 838 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 ST3GAL5Q9UNP4 418 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 SORCS3Q9UPU3 1222 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 GINS2Q9Y248 185 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 UBIAD1Q9Y5Z9 338 aa10.55□□□□□ -0.72
RPAP1-205ENST00000563293 TPRP12270 2363 aaKnown RBP10.55□□□□□ -0.72
RPAP1-205ENST00000563293 SPTBN2O15020 2390 aa10.54□□□□□ -0.72
RPAP1-205ENST00000563293 FAM205CA6NFA0 338 aa10.54□□□□□ -0.72
RPAP1-205ENST00000563293 RRN3P2A6NIE6 340 aa10.54□□□□□ -0.72
RPAP1-205ENST00000563293 CMA1P23946 247 aa10.54□□□□□ -0.72
RPAP1-205ENST00000563293 KRT76Q01546 638 aa10.54□□□□□ -0.72
RPAP1-205ENST00000563293 MTMR3Q13615 1198 aa10.54□□□□□ -0.72
RPAP1-205ENST00000563293 NFKBIBQ15653 356 aa10.54□□□□□ -0.72
RPAP1-205ENST00000563293 MTHFD1LQ6UB35 978 aa10.54□□□□□ -0.72
RPAP1-205ENST00000563293 UBALD2Q8IYN6 164 aa10.54□□□□□ -0.72
RPAP1-205ENST00000563293 KCTD17Q8N5Z5 321 aa10.54□□□□□ -0.72
RPAP1-205ENST00000563293 GIMAP8Q8ND71 665 aaPredicted RBP10.54□□□□□ -0.72
RPAP1-205ENST00000563293 MRPS27Q92552 414 aaKnown RBP10.54□□□□□ -0.72
RPAP1-205ENST00000563293 RMDN1Q96DB5 314 aa10.54□□□□□ -0.72
RPAP1-205ENST00000563293 LMBRD1Q9NUN5 540 aa10.54□□□□□ -0.72
RPAP1-205ENST00000563293 PCDHA7Q9UN72 937 aa10.54□□□□□ -0.72
RPAP1-205ENST00000563293 KDM3AQ9Y4C1 1321 aa10.54□□□□□ -0.72
RPAP1-205ENST00000563293 KMT2BQ9UMN6 2715 aaPredicted RBP10.53□□□□□ -0.72
RPAP1-205ENST00000563293 EDIL3O43854 480 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 CLASP2O75122 1294 aaKnown RBP10.53□□□□□ -0.72
RPAP1-205ENST00000563293 TDP2O95551 362 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 TXLNAP40222 546 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 FXR2P51116 673 aaKnown RBP eCLIP10.53□□□□□ -0.72
RPAP1-205ENST00000563293 FAM189BP81408 668 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 PLCB3Q01970 1234 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 PRR16Q569H4 304 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 SLC24A5Q71RS6 500 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 PLA2G4DQ86XP0 818 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 KIAA0319LQ8IZA0 1049 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 CCDC34Q96HJ3 373 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 CASD1Q96PB1 797 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 RIT2Q99578 217 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 ANP32EQ9BTT0 268 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 ADAM7Q9H2U9 754 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 KCNMB3Q9NPA1 279 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 ENTPD7Q9NQZ7 604 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 TBC1D22BQ9NU19 505 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 FAM13BQ9NYF5 915 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 FBXO2Q9UK22 296 aaPredicted RBP10.53□□□□□ -0.72
RPAP1-205ENST00000563293 PCDHA12Q9UN75 941 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 NR2E1Q9Y466 385 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 HCFC2Q9Y5Z7 792 aa10.53□□□□□ -0.72
RPAP1-205ENST00000563293 OTOGLQ3ZCN5 2332 aa10.52□□□□□ -0.72
RPAP1-205ENST00000563293 IGLV3-22A0A075B6J6 115 aa10.52□□□□□ -0.73
RPAP1-205ENST00000563293 FAM237AA0A1B0GTK4 181 aa10.52□□□□□ -0.73
RPAP1-205ENST00000563293 SMIM35A0A1B0GVV1 85 aa10.52□□□□□ -0.73
RPAP1-205ENST00000563293 DENND3A2RUS2 1198 aa10.52□□□□□ -0.73
RPAP1-205ENST00000563293 C2orf71A6NGG8 1288 aa10.52□□□□□ -0.73
RPAP1-205ENST00000563293 ZBTB42B2RXF5 422 aa10.52□□□□□ -0.73
RPAP1-205ENST00000563293 FAM86B1E9PN63 330 aa10.52□□□□□ -0.73
RPAP1-205ENST00000563293 M0QZ92 97 aa10.52□□□□□ -0.73
RPAP1-205ENST00000563293 RPS6KA5O75582 802 aa10.52□□□□□ -0.73
RPAP1-205ENST00000563293 KRT37O76014 449 aa10.52□□□□□ -0.73
RPAP1-205ENST00000563293 FAM86B2P0C5J1 330 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms